Cyprinodon variegatus (sheepshead minnow): 107098527
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Entry
107098527 CDS
T06110
Symbol
hes1
Name
(RefSeq) transcription factor HES-1
KO
K06054
hairy and enhancer of split 1
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03460
Fanconi anemia pathway
cvg04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
107098527 (hes1)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
107098527 (hes1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvg03000
]
107098527 (hes1)
03400 DNA repair and recombination proteins [BR:
cvg03400
]
107098527 (hes1)
Transcription factors [BR:
cvg03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
107098527 (hes1)
DNA repair and recombination proteins [BR:
cvg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex binding factors
107098527 (hes1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hairy_orange
HLH
bHLH_NCOA
Spectrin_1st_PEPL
Motif
Other DBs
NCBI-GeneID:
107098527
NCBI-ProteinID:
XP_015251743
Ensembl:
ENSCVAG00000002387
LinkDB
All DBs
Position
Unknown
AA seq
279 aa
AA seq
DB search
MPADMMEKSSSSPVAATPASMNTTPDKPKTASEHRKSSKPIMEKRRRARINESLGQLKTL
ILDALKKDSSRHSKLEKADILEMTVKHLRNLQRAQMTAALNTDPTVLGKYRAGFSECMNE
VTRFLSTCEGVNTEVRTRLLGHLASCMTQINAMNYPSQHQHQHQHQLPSAGASTHPSFGQ
SMVPIPSSSPQVLPMNPASCKGGSPPTSLPSDATKVYGGFQIVPATDGQFAFLIPNAAFA
PNGPVIPVYANNVSTPVPVPAAVSPGAPSANTDSVWRPW
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgcctgccgatatgatggaaaaatcctcatcctctccggtcgctgctacaccggcgagc
atgaacacaactccagacaaacccaagacagcatctgaacacagaaagtcatccaagccg
atcatggagaaaaggagaagagccagaataaacgaaagcttgggtcagctgaagactctc
attctggatgcgctcaaaaaggatagctccagacactccaaactggagaaagcagacatc
ctggagatgacagtgaagcacctccggaacttacagagagctcagatgaccgctgctctg
aacactgaccccaccgtcttaggaaaataccgcgcaggtttcagtgaatgcatgaatgaa
gtcacccgattcctgtccacctgcgagggcgtaaacacagaagtcagaacgcggctcctg
ggacacctggccagctgcatgacgcagatcaacgccatgaactaccccagccagcatcag
catcagcaccaacaccagctcccttcagcgggagcctcaacgcacccctcgtttggtcag
tccatggtgccgatccccagctcctccccgcaggtgctccccatgaaccccgcgtcctgc
aaagggggctccccgccgaccagcttaccatcagacgccaccaaagtgtacggcggcttc
cagatcgtgccagccacagacggacagttcgctttcctcatacctaacgcggcatttgcg
ccaaacggccccgtcatccctgtgtacgcaaacaacgtgagcacgccagtgcctgttcca
gccgcggtgtcccctggagccccctcagccaacacagactcagtgtggcgaccgtggtga
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