Cyprinodon variegatus (sheepshead minnow): 107098562
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Entry
107098562 CDS
T06110
Name
(RefSeq) low molecular weight neuronal intermediate filament-like
KO
K04572
neurofilament light polypeptide
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cvg01009
]
107098562
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cvg04812
]
107098562
Protein phosphatases and associated proteins [BR:
cvg01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
107098562
Cytoskeleton proteins [BR:
cvg04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
107098562
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Filament
Filament_head
Fib_alpha
TolA_bind_tri
DUF2594
DUF1664
Motif
Other DBs
NCBI-GeneID:
107098562
NCBI-ProteinID:
XP_015251787
Ensembl:
ENSCVAG00000002201
LinkDB
All DBs
Position
Unknown
AA seq
512 aa
AA seq
DB search
MSYSSDIYSSSSYRRIFGDAPRSGRVGLGSSSPSRLHSSGYRSSHRTYGSPSVVSSTTYR
RTAAPGRTFSSIPDSAMDLTQSTAVTNELKIIRTNEKEQLQGLNDRFVSFIEKVHNLEQH
NKVLEAEVTLLRQRNNEPSRLHELYEQEIRELRARVEELTHEKSQMHLDCVQMNETLERV
REKLEEESRLREEAENALKGYRKDVDDATLVRLELEKKVESLLDEIAFLRKVHEEELQEL
QTSLQATQVSVEMDMSKPDLAAALKDIRAQYENLSARNQVQAEEWYRSKFANVTEAAARN
QDAIKHSKEELSEYRRQVQARTLEIEALRGHNEALERQIAEMEDRHNNEIGEMQDTIQQL
EAALRSTKGEMSRHLREYQDLLNVKMALDIEIAAYRKLLEGEECRLSSVSSAMVHSGYSG
LSYTSSARAYALGAYRKPKQDEEEEEAGDEEEEKEEEEEEVEEEEGDEVEGEEEDEQEEG
EGDGEEEGEEEEEKPAEKEKEKESSTGKKSKS
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgagttactccagcgatatctacagcagcagctcctatcgtaggatctttggagatgcg
ccccggtcaggtcgcgtaggtctgggcagcagcagcccgtcccgtcttcactcctcgggt
taccgcagcagccaccgcacttatggctccccgtctgtggtctcctccaccacctaccgc
aggacagcggctcctggtcgcaccttctcctccatcccggactccgccatggacctgacc
cagtccaccgccgtcaccaacgagctcaagatcattcgcaccaacgagaaggagcagctg
cagggtctcaacgaccgcttcgtgtccttcatcgagaaggtccacaacctggaacagcac
aacaaagtcctggaggccgaggtaactctgctgcgccagcgcaacaacgagccgtcgcgc
ctgcacgagctgtacgagcaggagatccgcgaactgcgggcgcgcgtggaggagctgact
cacgagaagagccagatgcacctggactgcgtgcagatgaacgagacgctggagcgcgtg
agggagaagctggaggaggagagcaggctgcgggaggaggcggagaatgccttgaagggc
taccgtaaggacgtggatgacgccaccctggtgcgccttgagttggagaagaaagtggag
tctctgctggatgagatcgccttcctgaggaaagttcatgaagaggagctgcaggagctg
cagacttccctacaggcaactcaggtgtcagtagagatggacatgagtaaacccgatctg
gctgcagctctgaaggacatccgggctcagtatgagaacctgtcagctcggaaccaggtc
caggctgaggagtggtaccgctccaagtttgccaatgtgacagaggctgctgctcgcaac
caggatgccatcaagcactcaaaggaggagctgagcgagtaccgtaggcaggtgcaagcc
cgcaccctggagattgaggcccttaggggccacaatgaagcccttgagaggcagattgct
gagatggaggaccgccacaacaatgagatcggagagatgcaagacacgattcagcagctg
gaagctgctctgcgaagcaccaagggagaaatgtcccgtcatctgcgtgaataccaagac
ctgctgaatgtcaagatggccctggacattgagattgctgcttacaggaagctgctggaa
ggtgaagagtgtcgcctgagctcagtgagcagcgccatggtccactctggatattctgga
ctgtcctacacgtcgtcggcccgtgcctacgccctcggagcttacaggaagcccaagcag
gatgaggaggaagaggaggcaggagacgaggaggaggagaaggaggaagaagaggaggaa
gtagaggaggaggagggggatgaggtagaaggagaagaggaagatgagcaggaggaaggt
gagggagatggagaggaggagggagaagaggaagaggagaagccagcagagaaggagaag
gagaaggagagctccaccgggaagaaaagcaagagctaa
DBGET
integrated database retrieval system
