KEGG   Cyprinodon variegatus (sheepshead minnow): 107098648
Entry
107098648         CDS       T06110                                 
Symbol
rif1
Name
(RefSeq) telomere-associated protein RIF1 isoform X1
  KO
K11138  telomere-associated protein RIF1
Organism
cvg  Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:cvg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cvg03032]
    107098648 (rif1)
DNA replication proteins [BR:cvg03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    107098648 (rif1)
SSDB
Motif
Pfam: Rif1_N HEAT_ULK4 RBR
Other DBs
NCBI-GeneID: 107098648
NCBI-ProteinID: XP_015251904
Ensembl: ENSCVAG00000022479
LinkDB
Position
Unknown
AA seq 2353 aa
MMASAGPPSTSSFLPLLETLEDGTAGQSEQTDAYLTIANRLSGEEGQQFLSAVEKNFTRL
GKVILLHTSSPNAELSQAALQALGFCVYHSQVVSGISETFAAQILSALCSLVTKSMDKNT
CTRALWVISKQSFPADVVSKNVPTLLGSLERVWSREDLQSAVMDHEALNVIIRMIEQVPT
QMSDGAVRWAKLVIPLVVHSASKVRLRAAAALEMGMPLLLAKQAEVAAYLEPIMSAKLIP
DLQKLFMSKNETNVLKLWPLFVKLLGKLLHKGGPFINSLLRLEELGFRSSSPTIKKIAFI
AWKSLIDNFALNPDILSNSKRMKLLMQPLISIQVRTEALLLTKVEVWWYLIVQLGPNLSP
NFEQVAAPLLQSTIRSDSSAVPNTPSRPVAQNGAVAPSTPKSGNVSLNASVGTLSMSLNS
SMQASSCFSSIQLLGLEMLLHYFLGPEVVAAAAKNKIMLNLEPLNHPLLSGAPSFMKHAA
VLLSNIRDGFTAVGKEAPEPLLAVIWTSLVRFVNLTIDSAGSKKDRQGCEALTLMLQTLQ
SIVASEALPADRVLVLLKATLKGLPQRVLGSASYQVGKMDVLNGTPALFLILLLFNSGRL
PAYVEDERFFHCLQSLVTCGLTGPASPLAFAEAVLSAMSSCAASLQNKEQLCRMWSSVVG
PLTDTITQSNEVNQGDALEHNFSAMYAALMFPVSHLLHGSLLQQASQKAVLSSWSKLYRV
FARCSALVATAEENICCEELCVKMAAAVDRAALAVPSMLQAVCSILQVMVECVDFSPYTP
TFQQKLKSPHTLLHWARKRSKALGNLSTFVSLLAQCLEVYAAAPEDSSEAAGSALASVVS
TLFANLILANCVTEALSALVRPLTLLYEHAAGESCRFSSHLQGKLEKLLSEVLGCLQSRS
PVAHDDELLALLSPLLCVVFPHKNKHLRAAATQFWNATFANTASLAYPEEIRPVLSQVKQ
KTPIILPGFQAVSVPDELSENGSSESSQLETKLSGMPMSSAGKRDSMLAKPDANDRSSSK
TSRPVSMKLDFGSPKPPRREVLEEEASIDFVFIPPETKERVLTEHQKEVKRTKRVDIPAM
YNNLDASLDTSVFSQYTQSQDDSSDKVPAGQADGVVTEAPSEAQKKPTDSAEIHLKETQV
VVGPEGTETKRGSPPAEKSVPDSADLPLPGSDKCSEDKDVETKETPSPNTSNSSDVVSGT
PQKPSSSRRQSFITLEKYSEGKPASPGGVSSFTGPPVKKSNSQDQASANKRQSPEASQKS
ADPDSALLDSGPRSESDSPRRPIESRIKSEPVRLIERLQSDSDEDVIPDTQTKTEVQGSA
GSSEEMDSFSQDEESQSMMDDSQTSPGEPRRSRRHRVRPLLPGEDPEEREAKYTHVKRKR
SGESPKSDSSKPMPGRPNTRSKQVVEENSTRDRLRSKSQGSAGESTHRDSQGKHRKKVRL
YSHSQDLLGSPERKRRSVGQQDSSLTLIKPETGSSHGSTKPRKHDIFSKESEAGRTKEES
SQAAAAEGTADLKEKDEAHPETGSQTVENLPQKEESKTVEPEETTIQEERLKKEQEAPTS
SPQTEDKPQERMDSKEESKDETTTAMESEMTQDAVNAPEAEMDIFSQEDSQVTPPSADGA
IKRRSRRSKASSEPEDEDGGVNSSGRSTRSKTSTPLAVQAGAVGRTRRSKVLESSPSSTP
EGSQSLEASGSGSSRGRGRYPRGRSSQLQAASVESSESECSFTPEVSVRKKRGRKPKASL
QSPLTLDSKEHGADSQQADSQHFGTKNSLQESSETQDLKESELVAETNDAEAKKLDSESE
EAPPPPAEEKTGTEDTHKGSQSLSSTEQRDSDAGKESFQEVGAAESAEPGSAAIQGEEPQ
VMETPEEKAETSEEELKAKRVESDSDQQQPSSPPGEESQEGEELQQEKLQGDKLQMEAGL
QQENRQMEAGLQQENRQEEAGLQQDQESLKIPEKEPSADGVPEEDNKDVQTETTTDKRRQ
DLEAEPPGGAAAISQAPHQDSPLKQKDLEAASEPEAGQSPRNGWMRGTWSPSASPSTSIL
KTGQKRPLEVEMSSPVVKFRRVSFANPIQQQETADDIDRRSPALRTSSPRRSKVGSIPQP
KHITTPTKGGLVGSPRSLHSPSYRSSKKCLISEMSQEPRAVPRDCIYPSLVGCSAPVEAV
LTQISSTMWSRGFGQLIRARNVKSVGDLCALTPSEIKTLPIRSPKISNVKKALKIYEQQR
KGRGGDELKSFDETERMTSEPEETGGAPTPDEEEKTSAETLASELIDEPVSADVNSSVSE
ERRDGEERPGEGEQRPEDAPPAAVEALARRMTAPELSLCSPQQLVEMHEQLGGMMRAVVV
ELQTRLCGAGDKH
NT seq 7062 nt   +upstreamnt  +downstreamnt
atgatggcgtctgcaggacctcccagcacctccagcttcctccctctgttggagactctg
gaggacggtacggccgggcagtcggagcagacggacgcctacctgaccatcgccaatcga
ctcagtggggaggaaggccagcagtttctctcagctgtagagaagaactttactcgtttg
ggtaaagtcatattgctccacaccagcagtccgaacgctgagctgagccaggctgccttg
caagctttggggttctgcgtttatcactctcaggtggtttctggaatctctgagaccttt
gctgcacagatcctgtctgcgctctgctccctggtgaccaagtcgatggataagaacacc
tgtaccagagcattatgggtaatttccaaacagagctttcctgctgatgtcgtcagcaaa
aacgtgccgactttactgggttccttggagagagtgtggagcagagaggacctccagtct
gcggtgatggaccacgaagccctgaacgtcatcatcaggatgatagagcaggtgccgacc
cagatgagcgacggggcggtgcggtgggccaagctggtcatcccgctggtggtgcactct
gcctctaaggtgcgcctgcgcgccgccgcggccttggagatgggcatgcccctgctgctg
gccaagcaggcggaggtggcggcctacctggagcccatcatgtcggcgaaactgatccca
gatctgcagaagctcttcatgtccaagaatgagaccaacgtcctgaagctctggcctttg
tttgtgaagcttctcgggaagctgctgcataaaggaggtcctttcatcaactccctgctg
cgtctggaggagcttggtttccgcagctcctctcccaccatcaagaagatcgccttcatc
gcctggaagagcctcatcgataactttgctctcaacccagatatcctgagcaactccaaa
cgaatgaagctgctcatgcagccgctcatctccatccaggtgagaacggaggccctgctg
ctcaccaaggtggaggtctggtggtatctgatagtgcagctgggacccaacctgtccccc
aactttgagcaggtcgcggcgcctctgctccagtccaccatcaggtccgattcgtccgcc
gttccaaacactccttctagacccgtcgctcaaaacggagccgtggcgcccagcaccccg
aaatcaggcaacgtctccctgaacgcttcggtcggcacgctatcgatgagcctgaactcc
agcatgcaggcttcctcctgcttctcctccattcagctgctgggcctggagatgctgctc
cactacttcctgggaccggaggtcgttgctgctgcagcaaagaacaagattatgttaaat
ctagaacctctgaatcatccgctcctctctggcgctccatccttcatgaaacacgccgcc
gtgctcctctccaacatcagagacggcttcaccgccgttggcaaagaggctccagagccg
ctgttagccgtcatttggaccagtctcgtccggttcgtcaacttgactatagactcagca
ggcagtaagaaggatcgtcagggttgcgaggcgctcaccctgatgctgcagacactacag
agcatcgtagcctccgaggcgctgcctgctgaccgagtcctggttctgttgaaggccacg
ctgaaaggtctgcctcagagggtcctgggctcggcttcctaccaagtgggcaagatggac
gtgctgaacgggaccccggcgctcttcctcatcctcctcctcttcaacagcggcaggctg
ccggcctacgtagaggacgagaggtttttccactgcctgcagtcgctggtcacctgcggc
ctgaccggacccgcttctccgctggcgttcgccgaggccgtgctgagcgccatgagcagc
tgcgcagcgtctctgcagaacaaggagcagctgtgcaggatgtggagctcggtggtcggc
cctctgacagacaccatcacacagtcgaatgaagtgaaccaaggagacgccctggagcac
aacttcagcgccatgtacgcggccctgatgttccccgtcagtcacctcctccacggctcg
ctgctccagcaggcgtcccagaaggccgtgctgtcctcctggtccaagctgtaccgcgtg
ttcgcccgctgctccgctctggtggcgacggccgaggagaacatctgctgcgaggagctc
tgtgtgaagatggctgcggccgtggacagagcggcgctggcggtcccgtcgatgctgcaa
gccgtctgcagcatcctgcaggtcatggtggagtgcgtggacttctctccgtacacgccc
accttccagcagaagctgaaatctcctcacactctgctgcactgggcgcggaaacggagc
aaagccctggggaacctgtccaccttcgtgtccctgctggcccagtgtctggaggtttac
gccgcggccccggaggattcctcagaggccgccggctcggccctggcctccgtcgtctcc
actctgttcgccaacctcatcctcgccaactgcgtcaccgaggcgctgagcgccctcgtt
cggccgctgacgctcctctacgaacacgcggcaggagagagctgcaggttctccagccac
ctccagggaaagctggagaagctcctctctgaagtcctgggctgcctgcagtcgcgctcc
cccgttgcccatgacgacgagctgctggcgctgctgtcccctctgctctgcgtcgtcttc
ccacacaagaacaagcacctgcgcgcggcggccacgcagttctggaacgccacctttgcc
aacacggccagcctggcgtatcctgaggagatcagacccgtgctgagccaggtgaagcag
aaaactcccatcatccttcccggcttccaggccgtcagcgttcccgacgagctcagtgag
aacggctcgagtgagagctctcagctggagaccaagctcagcgggatgcccatgtcttcg
gccgggaagagggactccatgctcgccaagccggacgccaatgacaggagctcctccaag
acgtccagacccgtctcgatgaagctggactttggttctcccaaacctccacgtagggag
gttctggaagaagaagcttccatcgacttcgtcttcatccctcctgagacgaaggaaagg
gttctaaccgagcaccagaaggaggtgaaaagaaccaaaagggtggacattcctgccatg
tacaacaacctggacgcctccctggacaccagcgttttcagtcagtacacgcagagccaa
gacgactcttcggataaagttccagctggacaagctgacggcgttgttacggaggctccc
agtgaggcgcaaaagaaaccaaccgactctgccgagattcatttgaaagaaactcaagtc
gtcgtcggccctgaaggtactgagacgaagagaggaagcccgccggcggagaagagtgtc
ccagactctgcagatcttcctctgccgggttctgataaatgcagcgaggacaaagacgtg
gagacaaaagaaaccccaagtccaaacacctccaattcctctgatgtggtctcagggact
cctcagaagcccagcagcagtcggcgtcagtctttcatcactttggagaagtacagtgag
ggaaagcctgccagtcccggtggagtctcctcctttactggtcctcctgttaagaagtct
aacagccaagatcaagctagtgctaataagaggcaatctcctgaagcctcacagaaatct
gctgatccagactctgctttattagattctggtccccggtcggaaagcgattctcctcgg
aggcccatagagtcccggattaaaagtgagcctgtaagactgattgagagacttcagagt
gactctgacgaggatgtcatcccggacacgcagaccaaaacggaggtccagggaagcgct
ggctcctcggaggagatggattccttcagtcaggatgaggagtcccaatcaatgatggat
gattcccaaacgtctccaggcgagccgagacgatccagacgccacagagtcagacctctg
ctccccggagaagaccccgaggaacgcgaggcgaagtacacgcacgtcaaaaggaaacgt
tcaggagaaagtcccaaaagtgactcttccaaaccaatgccaggcagacccaacaccagg
agcaaacaggtggtagaggagaacagcaccagagaccggctgcggtccaagtctcagggc
agcgccggcgaatccacccacagggactcgcaggggaaacatcggaagaaggtcagactt
tacagccattcgcaggacctcctagggtctcctgagcgtaagcggagaagcgtcggtcag
caggattccagcctgaccctcatcaaaccagaaaccggctccagtcatggaagcacaaag
cccagaaagcacgacatcttcagcaaggagtctgaggctggaaggaccaaagaagagtcc
agccaagctgctgctgctgaaggtacggcagatctgaaggagaaagacgaggctcatcca
gagaccggatcccaaacggtggaaaatttacctcagaaggaagagtccaagacagtagag
ccggaagaaacgaccatacaagaagagagactgaagaaagagcaggaagctccgacgtct
tctccacaaactgaagataaaccacaagaaaggatggattctaaagaagagtccaaagat
gaaaccacaacagcgatggagagcgaaatgacgcaagacgccgttaacgcccccgaagca
gagatggacatcttcagccaggaggactctcaggtcacccctccatccgccgacggtgca
attaaacggagatccagacggagcaaagcgtcctctgagccagaagacgaagatggtggc
gtgaactcttccggacggtccacccgttctaagacatccacgcctctggcggttcaggca
ggagccgtaggcaggaccaggaggagtaaagtcctggaatctagtcccagctcgacccca
gaaggctcccagtcgttggaagcgtctgggtcagggtcgtctcgaggcaggggcagatat
ccaagagggagatcctctcagttgcaggcagccagtgtggagtcgtcagagtccgagtgc
tcctttactccagaggtctctgttcgcaagaaaagggggaggaagcccaaagcctctctg
cagagtcctctgacgctggattcaaaggagcacggagcggacagccagcaagcagattct
caacactttgggacaaagaatagcttacaagaatcatcagagacgcaagatctaaaggaa
tctgagctggtggcagaaaccaacgatgctgaggcaaagaagttggattctgagtccgag
gaggctccgcctccaccagctgaagagaagactggaactgaagacactcacaagggtagc
cagtcgctgagctccactgagcagagagattcagatgcaggaaaggagtctttccaagaa
gtaggagcggctgaatctgctgagccaggaagtgctgccatacagggggaggagccacag
gtgatggagacccccgaggaaaaagctgaaacatctgaggaggaactgaaggcgaagcgt
gtggaatcagattcagaccagcagcaaccgtcctctcctccaggggaggagtctcaggag
ggggaggagcttcagcaagagaagcttcagggggacaaacttcagatggaggcggggctt
cagcaggagaatcgtcagatggaggcggggcttcagcaggagaatcgtcaggaggaggcg
gggcttcagcaggaccaggagtctctaaagatcccagaaaaagaaccgtccgctgatggt
gtcccagaagaggacaataaagacgttcaaacggagacgaccacggacaaacgcagacag
gacctggaagctgagccgccaggcggcgctgcggcgatctcccaggcgcctcatcaggac
tctccgctcaaacagaaggacctggaggccgcatcagaaccagaagcgggacagagcccc
agaaatggctggatgaggggaacatggtcgccttcagcctccccctccaccagcatcctg
aagacgggccagaagaggcccctggaggtggagatgtcgtctcccgtcgttaagttccgc
cgcgtgtccttcgctaaccccatccaacagcaggagacggctgatgatatcgatcgccgc
agcccggctcttagaaccagctctcccagaaggtcaaaggtcggcagcatccctcagccg
aagcacatcaccactccaactaaaggcggtctggtcgggagtcccagaagtctgcacagt
ccgagttacaggagctccaagaagtgcctgatatcagaaatgagtcaggagcctcgagcc
gtgcccagagactgcatctacccctccctggtgggctgctcggcccccgtggaggctgtg
ctcacccagatttcgtccaccatgtggtccagagggttcgggcaactcattcgcgccaga
aacgtcaaatcggtgggtgacctctgcgccctgacgccctccgagatcaagactctcccc
atccggtctccaaagatctccaacgtcaagaaggccctgaagatctacgagcagcagcgt
aaaggcagaggaggagacgagctgaagagttttgatgaaacggagaggatgacgtctgag
ccggaggagacgggcggcgctcccaccccggacgaggaggagaagacctcagcagaaacc
ctggcgtcggagctgattgacgagccggtttctgccgatgtgaacagctctgtgtcagag
gagcggcgtgatggagaggagcgacccggggagggagagcagcgacccgaggacgcgccg
ccagcggcggtggaggctctggcccgcaggatgacggcgccggaactgagcctttgctcc
ccgcagcagctggtggagatgcacgagcagctgggaggcatgatgagggcggtggtggtg
gagctgcagacacgtctgtgtggcgccggcgacaaacactga

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