Cyprinodon variegatus (sheepshead minnow): 107098655
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Entry
107098655 CDS
T06110
Symbol
nelfb
Name
(RefSeq) negative elongation factor B
KO
K15180
negative elongation factor B
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
107098655 (nelfb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cvg03021
]
107098655 (nelfb)
Transcription machinery [BR:
cvg03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
NELF complex
107098655 (nelfb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COBRA1
Motif
Other DBs
NCBI-GeneID:
107098655
NCBI-ProteinID:
XP_015251915
Ensembl:
ENSCVAG00000021970
LinkDB
All DBs
Position
Unknown
AA seq
581 aa
AA seq
DB search
MFAGLPELGIANGEDLKETLTNCTEPLKAIDQFQMENGILLPTLQSALPFLDLHGTPRLE
FHQSVFDELREKLMEQVAVIAEGKDEDRYGKLEELLEKSFPLVKMPSIQPVVMQVLKHLP
KVPEKKLKMVMADKELYKVCAVEVKRQIWQDNQALFGDEVSPLLKQYIVEKEAALFSSDT
TSSLHNFFSPTPKARRQGEVVLKLTQMIGKNVKLYDMVLQFLRTLFLRTRNVHYCTLRAE
LLMSLHDLDISEICSVDPCHKFTWCLDACIREKFVDGKRARELQGFLDGVKKGQEQVLGD
LSMILCDPFACNTLVLSIIRNIQELLSQDALPRDSPDLMLLLRMLSLGQGAWDMIDSQVF
KEPRMDLEVVTRFLPAMMSVVVDDHTFVVEQKLPSEEKLSLTYPTALPDAFTRYLQDNRV
ASEMGLYYILHIAKLRNKNALQRLLPALVETYNDMAFGDIFLHLLTGHLTLLSDEFGSEE
FCTVVFDSFLLTSFSSKENVHRHILRLLLHLHHKVLPSYLETLMQTLEPPKQCSEPLKEL
HNQLTEKLEAQKKSPAPPDDSSSMDLGLHPVPTTTVPTPPL
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgttcgcggggctgccggaactcgggatagccaatggcgaagacttaaaggaaactctg
accaactgcacagagcctttgaaagccattgatcagtttcagatggaaaatggcatcctg
ctccctacactgcagtctgctttgcccttcctcgaccttcatggaacacctcggttggag
ttccaccagtccgtcttcgacgagcttcgtgaaaaactgatggagcaagtggccgtcatt
gcagagggcaaggatgaagacagatatggaaagcttgaagagctgttggaaaagagcttt
cctctggtgaaaatgccttccatacagccagtggtgatgcaggttctgaagcatctccct
aaggtaccagaaaagaaactgaagatggtcatggcggacaaggagctctacaaagtttgt
gctgtcgaggtaaaaagacagatatggcaggacaaccaggctctgttcggagacgaggta
tccccccttctgaagcagtacattgtggagaaggaagcagctcttttcagcagcgacaca
acttcttcactacacaacttcttcagtccaacaccaaaagcacggcgccagggcgaggtg
gtgttaaaactcacccaaatgattgggaagaatgtaaagctgtatgacatggtgctgcag
ttcttacggacactcttcctgcgaactcgaaacgttcactactgcactctgagagcagag
ctgctaatgtctttacatgacctggacataagcgaaatttgctctgtggacccctgccac
aagttcacttggtgtttggacgcctgcatccgtgagaaatttgtggatggcaaacgagcc
agagagctgcaaggtttcctggatggtgtgaagaagggacaagagcaggtccttggagat
ttgtccatgattctgtgtgatccgtttgcctgcaacacattggtcctaagtataataaga
aacatacaggagctgctgagtcaagatgctttaccaagagacagccccgacctgatgctc
cttctgaggatgctgtctctgggtcagggagcatgggacatgatcgacagccaggtcttt
aaagagcctcgtatggatttagaggtggtgacccgcttcctgcccgcaatgatgtctgtg
gttgttgatgatcacacattcgttgtagaacagaagcttcccagtgaagagaaattatcc
ctgacttatcccacagccctcccagatgcattcaccagatatctccaggacaacagagtt
gcttctgaaatggggctctactatattctccacatcgccaaactgaggaacaagaatgct
ttgcagaggttgctgcctgctctggtggagacgtataatgacatggcttttggtgacatc
ttcctacacctgctgactgggcacctcaccctgctctctgatgagtttggatcagaggag
ttttgcactgttgtatttgatagcttcctcctaacgtcattctccagtaaagaaaatgtc
catagacacattctccgcttgttgctgcatctccatcacaaagtgctgccctcatatctg
gaaacactgatgcaaacgctcgagcctccaaaacagtgcagtgagccacttaaggagctg
cacaaccagctgacagaaaaactggaggcccaaaagaagagtccggcaccaccagatgac
tcttcttctatggacctggggctgcatcctgtacccaccaccactgtcccaaccccacct
ctctga
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