Cyprinodon variegatus (sheepshead minnow): 107098683
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Entry
107098683 CDS
T06110
Name
(RefSeq) M-protein, striated muscle-like
KO
K24495
myomesin
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
107098683
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cvg04990
]
107098683
Domain-containing proteins not elsewhere classified [BR:
cvg04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
107098683
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
I-set
Ig_3
Ig_2
ig
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
V-set
C2-set_2
Ig_VEGFR-1-like_5th
C1-set
Terpene_synth_C
Motif
Other DBs
NCBI-GeneID:
107098683
NCBI-ProteinID:
XP_015251955
LinkDB
All DBs
Position
Unknown
AA seq
1227 aa
AA seq
DB search
MASTVKPWYKAKAVSHVKTDYAYHHSRHVVQQHTERKSSSKSTHQVQAQATAAMAEPAYT
IPASRQRTAGETEEYQRVSTNVGKGLAVIQEELHRMRIATKAQVESIAIQKEVKDMMRKR
VDLLEEIPKMPDFLVALRPHIVWEKTPVKLFCTVEGNPRPIVKWYKGGAPVDPLSAPGKY
KIESKYGVHSLIISSIQSTFAPNLGYVTIPGEPTDVHASEIFKSYVVLSWTPPSPRGRAP
LWYIIEKCLAGTGAWQRINTAVKLHSPRCPLFDLQDGQKYQFRVYSVNMYGSSEASAPSE
PIQKVDEDGVPSAPGKVVATRNTKSSVFVQWEAPTHLKNLMGYYIDGRVVGAKEWFPCNH
KPFRHNRFVVHRLIPGESYVFRVQAVNIFGLSEESQESSPIAVEPALATPSAPFGITMLS
CDGSSMTLAWKSPKHCGGSKVNAYYIDKRDADTLVWKEVNLAAVTERICTVDHLTEGTFY
EFRIQAGNLAGVGLPSAPSAPMKCEAWTMEVPGPAYDLGFSEVRSNSLVVLWKAPVYTGA
SAVTGYFVDMAKKGSSEFVTLNEEPVSHRYLQVTGLEEGTTYVFRVRAVNSNGVGKASEL
SEPVCARALPGTTEIVAGVDEETGDVFLSFEACEICETSKFVWSKNYKAIGDCPRVNVTT
KGRTSRLTFTNPDKEDLGRYSVVVTDTDGVSSSHTLTEDALNTMLELSYAIRHPVVPLKH
NLNYEILEKGHVRFWLQAVKLSPSVSYRFIVNDKEVTSGEGQKISHDVASGVIQMTVDHF
TRANEGTYTVQITDGKAKTQSSLVLVGDAFKAALKEAEFQRKEHIRKQGPHFSEYLHFTV
SEDCTVMLTCKVANVKKDTTFHWYKEDDEIVPETPPNVMSGAVSLPLPLFSRKDQGVYKA
VLSDDKGKDTSVYDISGQVFDDIINAIARNAGASASELVLQCTPEGIRLQCYMNYYTEEM
KTVWKHKDSKIASSEKMRIGGTAEMAWMQICDPSDKEKGHYAIEISDGVTTHTRTFDLSG
QAYTDAYEEYLRLKAAAFAEKNRGRVVGGLPDVVTIMEEKSLSLTCTVFGEPTPEVTWFK
NEQEVACNEHTRVTFDGGKFASLVINKVTPDDSGKYSINVRNKYGGEFVEITVSVYRHGE
PIPEPKLGHPKTAAPAAQPAPPKSPAPSKTPTPSKPQTPAQSMKSPTPASTPASKSPTPX
XXXXXXXRSVKSPTPPRFMKSPTPPRK
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atggcttccacagtcaaaccctggtataaggcgaaggctgtgagccacgttaaaactgat
tatgcttatcatcacagtagacatgttgtccagcagcatacagaaaggaaatccagctcc
aagtcgacacaccaggtgcaggctcaggccacagcggctatggcagaaccagcctatacc
ataccagcgtcccggcagaggactgctggggaaactgaggaatatcaaagagtgtctaca
aatgtggggaaaggactggctgttattcaggaggagctgcacagaatgaggattgccact
aaagctcaagtggagagtattgctatccaaaaagaggtgaaggacatgatgagaaagaga
gtggatttactggaggaaattcccaagatgcctgacttcttggtggccctgcggccccac
attgtctgggagaagaccccggtgaagcttttttgcaccgtggagggaaacccacgccct
attgttaaatggtataaaggaggagccccagtggatccactgagcgccccaggaaagtac
aagattgagagcaagtatggagtccacagtctgatcataagcagtattcagtccacgttc
gctcccaatctaggctacgttacaatccctggcgagcccacggacgtgcatgcgtctgag
attttcaaatcatacgtggtgctgagttggacgcctcccagccctcggggacgggctccg
ctctggtacatcattgaaaagtgcttagcaggcactggagcgtggcagaggatcaacaca
gccgtcaaactgcattcaccccgttgcccgctatttgatttgcaagacgggcaaaagtac
cagttccgagtctattctgtcaacatgtatggttccagcgaggcctcagcgccttcagag
cccatccaaaaggtggatgaggatggcgttccctctgctcctgggaaggttgttgccaca
agaaacaccaagtcatcagtgtttgtccaatgggaagctcccacgcatttgaagaacctg
atgggttattacattgatggccgtgttgtaggagccaaggagtggttcccctgtaaccac
aaacccttcagacataacaggtttgtggtccaccgccttatcccaggggagagctacgtg
ttccgtgtccaagccgtcaacatctttggcctcagtgaagagtcccaggagtcctctccc
atcgctgtggagcctgctctggccactcccagtgcaccgttcggtatcaccatgctgagc
tgcgacggctcctccatgactttggcctggaagagtcccaaacactgtggcggctccaag
gtcaacgcttattacatcgacaagcgtgatgctgacactttggtgtggaaggaggtcaac
ctggccgccgtcactgaaaggatctgtactgtggaccatctaacagagggaactttttac
gagttcaggatccaggctggtaatctagcaggtgttggtctaccttcagctcccagtgcc
ccgatgaaatgtgaagcttggaccatggaggtgccaggtccagcctatgacctgggcttc
agtgaagtcagaagtaactctctggtcgtcctatggaaagctcctgtttatactggagcc
agtgctgtcaccggatactttgtggacatggccaagaagggttccagtgagtttgtaact
ctgaacgaggagccagtgagtcatcgttacctgcaggtcaccggactggaggaagggact
acctacgtctttagagtccgtgcagtcaactcaaacggtgtcggtaaagcttctgagctg
tctgagccagtctgtgccagagctcttccaggaacaacagagatagtagccggtgtggac
gaggagactggagatgttttcctgtcatttgaggcctgtgagatctgtgaaacctccaag
tttgtgtggtcaaagaactacaaagccatcggtgattgccccagggtcaacgtcacaacc
aagggcagaacctccagacttaccttcaccaaccctgataaggaggatttgggcagatac
tctgtggtcgtcactgacacagatggggtttcctccagccacactctgactgaggacgct
ctgaacacgatgcttgaactcagctacgccatcaggcacccagtggttccgctgaaacac
aacctgaactatgagattctggagaagggacatgttcgtttctggctgcaggccgtcaag
ctgtctccatccgtctcctacaggttcatcgtcaacgacaaggaggtcaccagtggcgag
ggtcaaaagatcagccatgatgtggcttcaggggtcatccagatgacagtggatcatttc
acccgagccaatgaggggacatacacggtccagatcactgacggcaaggccaaaacccag
agctccctggtccttgtgggagatgcattcaaggctgccctgaaggaggctgagtttcag
aggaaagagcacattaggaagcaaggtccacatttctctgagtatctgcacttcactgtc
tctgaggactgtacagtgatgctcacctgcaaggtggctaatgtgaaaaaggacacaact
ttccactggtacaaagaagatgatgagattgtcccagagactccccccaatgtcatgtct
ggagccgtctcccttcctctgcctttgttctccagaaaggatcagggtgtctataaggct
gtgctgagtgatgacaaaggaaaggacacttctgtttatgacatttcaggccaagtgttt
gatgacatcatcaatgcaattgctcgcaatgctggtgcgtcagcctctgagctggtcttg
cagtgtactccagagggcatcaggctgcagtgctacatgaactactacacagaggagatg
aagactgtctggaagcacaaggacagtaagatcgcatcctctgagaagatgaggattggc
ggcactgcagagatggcctggatgcagatttgcgatccatccgataaggagaagggtcac
tacgccattgagatctcagatggggtaacaacccacacccggacctttgacctctctgga
caagcttacactgatgcctatgaggagtatctgaggcttaaggcggctgcatttgctgag
aagaaccgtggcagagtggttggtggactccctgatgtggtcactattatggaagagaag
tctctgagcctgacctgcaccgtgttcggcgagccgactcctgaggtcacctggttcaaa
aacgagcaagaggtggcatgcaatgagcacacccgggtcacatttgatggcgggaagttc
gccagcctggtgatcaataaagtcacccccgacgactccggcaagtacagcatcaacgtc
cgcaacaaatacggcggcgagttcgtggagatcaccgttagcgtctacaggcacggggaa
ccgatcccagagcccaaactgggacaccctaaaaccgccgcgcctgcagcccagcctgca
ccgcccaaatccccagccccctccaagacccctaccccatctaagccccagaccccagct
cagtccatgaagagcccaacccctgcctccaccccggcatccaagtccccaaccccnnnn
nnnnnnnnnnnnnnnnnnnnncgtagtgtcaagtccccaaccccccccaggttcatgaaa
tctcccaccccgcccagaaagtaa
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