Cyprinodon variegatus (sheepshead minnow): 107098777
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Entry
107098777 CDS
T06110
Name
(RefSeq) nucleolysin TIA-1 isoform p40-like isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvg03019
]
107098777
03041 Spliceosome [BR:
cvg03041
]
107098777
Messenger RNA biogenesis [BR:
cvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
107098777
Spliceosome [BR:
cvg03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
107098777
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_Nup35
Calcipressin
Nup35_RRM_2
RRM_3
OB_RRP5
Motif
Other DBs
NCBI-GeneID:
107098777
NCBI-ProteinID:
XP_015252106
Ensembl:
ENSCVAG00000015489
UniProt:
A0A3Q2GKV6
LinkDB
All DBs
Position
Unknown
AA seq
387 aa
AA seq
DB search
MDDEQPRTLYVGNLSRDVTEPLILQVFQQIGPCKSCKMINDTAGNDPYCFVEFYDHRHAA
ASLAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDVKAAFAPFGR
ISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQHMGGQWLGGRQIRTNWATRKPPAPKA
TYETNSKHLSFDDVMSQSSPSNCTVYCGGVSTGLTEQLMRQTFSPFGQIMEVRVFPDKGY
SFVRFNSHEAAAHAIVSVNGSSIEGHVVKCYWGKETPDMMNSMQPMSVPQQQNKIGFAAA
QPYNQWGQWYGNGPQISQYVPNGWQVPTYGVYSQAWNQQGFNHLPASAGWTGMSAISNGG
VMEPTQGLNGSMLANQPGMGAAGYPTH
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgagcagcctagaaccttgtatgtaggaaatctgtccagggatgtcactgag
cccctcattctacaggtcttccaacagatagggccctgcaagagctgtaaaatgatcaat
gatactgctggaaatgatccatactgctttgtggagttctatgatcacaggcatgctgct
gcctcattggcagccatgaatggaaggaaaattttgggtaaggaggtgaaagtcaactgg
gcaacaacaccatccagccagaaaaaagacacaagcaatcactttcatgtgttcgttgga
gacctcagtccagagataacaacagaagacgtcaaagctgcctttgctcctttcggcagg
atatcagatgctcgagttgtgaaggatatggctacagggaaatctaaaggctatggcttt
gtgtcttttttcaataaatgggatgcagagaatgccattcagcacatggggggacagtgg
ttaggtgggagacagatacgaaccaactgggccacaagaaagccccctgctccgaaggcc
acctatgaaacgaactccaagcacctatcctttgatgacgtcatgagccagtcaagcccc
agtaactgcactgtgtattgtggcggggtcagcacagggctcacggagcaactgatgaga
cagaccttctctccctttggacagatcatggaagtcagagtttttccagataaaggctat
tcgttcgtgaggtttaactcccatgaagcagcagcccatgcaattgtgtctgtcaatggt
tcttcaattgagggtcacgtagtgaagtgctattggggtaaagagacgccagacatgatg
aactccatgcagccgatgtcggtgccacagcagcagaacaagattggctttgctgcagcc
cagccttacaatcagtggggccaatggtatggcaacgggccccagatcagccagtatgtc
cctaacgggtggcaggtccccacttatggtgtctacagtcaggcctggaaccagcagggc
tttaatcacttaccggccagtgctgggtggactggcatgagcgccatcagtaacggtggg
gttatggagcctacacagggattgaatgggagtatgctagccaaccagcctggcatggga
gccgcaggataccccacacactga
DBGET
integrated database retrieval system
