Cyprinodon variegatus (sheepshead minnow): 107098847
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Entry
107098847 CDS
T06110
Symbol
dis3l
Name
(RefSeq) DIS3-like exonuclease 1
KO
K18681
DIS3-like exonuclease 1 [EC:3.1.13.-]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107098847 (dis3l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvg03019
]
107098847 (dis3l)
Messenger RNA biogenesis [BR:
cvg03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
107098847 (dis3l)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
OB_Dis3
CSD2
Rrp44_CSD1
Rrp44_S1
Motif
Other DBs
NCBI-GeneID:
107098847
NCBI-ProteinID:
XP_015252192
LinkDB
All DBs
Position
Unknown
AA seq
1002 aa
AA seq
DB search
MQTLQDGKVLPGDLTHYVVPDAGVVLNYLDVLELTELQGVVFTQTACEALRSKGRRFYNH
LRNLLKDPRHDCILFANEFQTYSHCPREKGESQETWQTRCVYAAAVWFYNHLAGAMKVVM
ITEDQDAVARFGSLNSGVFVISVQDYLQNFWPDLQEAHEVYRNISQVLQEKESEDSQREF
SEHLPAEIVEAGIKSGRYLKGTLNVNRYRAQSEAFVTNEEFSNKSPDLINGVLVFGFKSR
NRAVHGDLVAVELLPKSKWRGRGTALAEGPLDENSGEDGESNPLPTGHIVGILQRNWRDY
VVTFPPRDGNQNQSRGSQRILAVPWDQRIPKIRISTQQADALQDHRVLVRIDSWPSNSLY
PNGHSVRVLGRVGDMETEVQTILLENSINVPPFSEAQLREMPAQPWTVDPTEVAKRRDLR
DTHLVFSIDPRGCEDVDDAMSVRSLGDGLLELGVHIADVTHFVREGSLTDLEARSRATTY
YLADRRYDMLPAVLSADLCSLLGGVDRYAMSVLWELDAQSLAYKDVWFGRTLIRSSYQLH
YELAQALLNGEEAPVPELAQLDPKERAAKLSELTAALEKLTLVARHLRAQRDQGGALELE
GLEVRAQLDAEKNITALVPKQPLEVHETVAECMIYANHWVARKIQEAFPCRALLRRHPPP
RQEFFDLLVETAKARGFCMDTSTNKALADSLDQAVDPEDPLVNRLLRMMATQAMSQALYF
STGSQPDHQFYHYGLALDRYTHFTSPIRRYADMVVHRLLTAALQVGQEAEPARKLEGNKD
LEELAEHINTRNRAAKQAQTQSVALFQYLFFKERDPQTDPRCVADSIIYAIRDNGVLVLV
PEYGVKGPVYMKTKTGEVVTAGPDGTCEWQSGTVQRHPDHIVTTCGCGSTTFRLFDHITV
RISVLPSNCHADTLKLEVISNKPHRSSAPQRPDSQGRSQLVQEVVRLAEEAQEKAAQRPK
LSKWEREFQQSRAPNLYSILEEIRELALMDPDTASRFCASTA
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaccctccaagatggtaaagttctgcctggagatctgacccactacgtggttccg
gacgctggggtggtgctgaactacctggatgttctggagctcaccgagctgcagggggtg
gtgttcacccagacggcctgcgaggcgctgcgcagcaaaggacgcaggttctacaaccat
ctgaggaacctgctgaaagacccgcgccatgactgcatcctgtttgccaacgagttccag
acatactcccactgccccagagagaaaggcgagagccaggagacgtggcagaccaggtgc
gtttacgccgccgccgtctggttctacaaccacctggctggagccatgaaagtggtgatg
atcacggaggaccaagacgccgtggctcggtttggcagcctcaactccggagtgtttgtc
atcagcgtccaggactatttgcagaacttctggccagacctgcaggaggcccatgaggtc
tacaggaacatctctcaggtgctgcaggagaaggagagcgaggattcccagagggagttc
tcggaacatctgcctgccgagattgtggaggctgggatcaaatcgggacggtaccttaag
ggaaccctgaatgtgaacagatatcgggctcaaagcgaggctttcgtcactaacgaggag
ttctccaacaagagcccagatctgatcaacggtgtgttggtgttcggttttaagagccgg
aaccgagccgtgcacggcgacctggtcgcggtggagctgttgccgaagagcaaatggaga
ggcagagggacagctctggctgaggggccgctggacgagaatagcggggaggacggcgag
tccaaccctttgcccacaggtcacatcgttggaatcctgcagagaaactggagggactac
gtggtgacctttccccccagggatgggaaccagaaccagagcaggggctcccagcgcatc
ctggctgtaccctgggaccaacggatccccaagatcaggatcagcacccagcaggcggac
gctctgcaggaccacagggtgctggtgcggatcgactcgtggcccagcaactccctctat
cccaacggacacagcgtgcgggttctgggtcgggttggagatatggagacagaggtccag
accatcctgctggagaacagcatcaacgttcctccattttctgaagcacagctaagggag
atgccggcgcagccctggaccgtggatcccaccgaggtagcgaagcgacgggacctcagg
gacacccatctggtgttcagcatcgacccgcgcggctgcgaggatgtggacgacgcgatg
tcggtgaggagcctcggcgacggactcctggaactgggggtccacatcgctgacgtcact
cacttcgtccgcgagggctcgctcacggacctggaggcccgctccagagccaccacctat
tacctggcagaccgccgctacgacatgctgcctgctgtgctcagcgccgacctctgctcg
ctgctgggcggggtcgacaggtacgccatgagcgtcctgtgggagctggacgcccagagc
ctggcttacaaagatgtgtggtttggtcgaaccctgatccgctcttcctaccagcttcac
tacgagctggctcaggcgctgctgaacggggaggaggcccctgttccggagctggcccag
ctggaccccaaggagcgggccgccaagctttcggagctcactgcggcgctggagaagctg
acgctggtggccagacatctacgggctcagagggaccaaggaggagccctggagctggag
gggttggaggtccgggcccagctggatgcagagaagaacatcacggcactggttcccaag
cagcccctggaggtccatgagactgtggcagagtgcatgatctatgccaaccactgggtg
gcgcgtaagatccaggaagcttttccctgccgggcgctgctgaggcgccaccctccgcca
cgacaggagtttttcgatctactggtggaaacggccaaggccagggggttctgcatggac
accagtaccaacaaagccttggccgactctctggaccaagccgttgacccagaggacccg
ctggtgaacaggctcctaagaatgatggccacccaggccatgtcccaggcactgtacttc
tccactggcagccagccagatcaccagttctaccattacggtctggctcttgaccgctat
acgcacttcacctccccgatccgccggtatgccgacatggtggtccaccgcctcctgacc
gccgccctgcaggtggggcaggaggcggagcctgccaggaagctggaggggaacaaagac
ctggaggagctggctgagcacatcaacacaagaaaccgggcggccaagcaagcccagacc
cagtccgttgcattgtttcagtacctcttcttcaaagaacgggatcctcagaccgaccca
cgctgcgtggctgacagcatcatatacgccatcagagacaatggtgtcctggtcttagtt
ccagagtacggcgtgaagggcccggtctacatgaagactaaaacaggcgaggtggtgaca
gcaggcccagacggtacctgcgagtggcaaagcggcactgtgcagcgtcacccagaccac
atcgtcaccacgtgtggctgcggcagcaccaccttcaggctgtttgatcacatcacggtc
cggatctctgtcctaccctccaactgccacgccgacaccctgaaactggaggtcatcagc
aacaagccgcatcgcagttcagcgccgcagcggcccgattcgcaggggcgcagccagctg
gtccaggaggtggtgcggctcgccgaggaggcgcaggagaaggcagcgcagcgacccaaa
ctctccaagtgggagcgggagttccagcagagcagagctcctaacctgtactccatcctg
gaggagatccgggagctggctctgatggacccggacacggcctcccggttctgtgccagc
acagcttag
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