Cyprinodon variegatus (sheepshead minnow): 107098881
Help
Entry
107098881 CDS
T06110
Symbol
arhgef10
Name
(RefSeq) rho guanine nucleotide exchange factor 10 isoform X1
KO
K16727
Rho guanine nucleotide exchange factor 10
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvg04131
]
107098881 (arhgef10)
03036 Chromosome and associated proteins [BR:
cvg03036
]
107098881 (arhgef10)
Membrane trafficking [BR:
cvg04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
107098881 (arhgef10)
Chromosome and associated proteins [BR:
cvg03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
107098881 (arhgef10)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_2
PH_19
RhoGEF
Beta-prop_LRRK2
Motif
Other DBs
NCBI-GeneID:
107098881
NCBI-ProteinID:
XP_015252241
Ensembl:
ENSCVAG00000009603
LinkDB
All DBs
Position
Unknown
AA seq
1441 aa
AA seq
DB search
MDADEFPPPPPEMLADDDAFNDEDEGEAFDFDSGDDIPEAPPAPPILPTEDPSPVDSLTI
HPEDSHCIPEPPPPISHSEPSSLDTTAAISELSSAGRETTEAKETSAAEGTNDREEDLPP
LPSPPPPVGYGVQTDPRSADAEGKDASLDAPQPSPALPRTSSRTKVNPYSVIDISPMQQL
EQQQGPSSSTSSLTESKLQEEEGRDILTSSSSITSGYSVPVPCGYATPSGVPLITPAYTT
PVIIRHLSMDEDVTVVGTSNTSADSVFSEEYPPIAEEDALAKWASDPANTAWMENPDEVI
YDDVPRENSDSNTDPDEMIYDDVELGEEGGCSSSLDNGWSSSEFESYDEASDGEGHPENG
LPHAFMRGKPPQRKIHLSQDLTRLKEHYEKKMKGLMASTVGTVELQQLKQKHEQKMQKLV
KAAKEGTKDGLEKTKAAVKRGRSFIKTKSFCQERKSACLEGESELFIEVDCFNVEPVLCP
TPEGLTQQQLVRRCILGSILESEKNYLDALKRILEHYEKPLSQIEPKLLSDRKLKIIFYR
VREILQCHFLFQIAIASRVSEWDSLEMIGDVFVASFSKSMVLDAYSEYVNNFSTAMAVVR
KTCASKPGFLEFLKHRQETSSDRMTLYGLMMKPIQRFPQFILLLQDMLKNTPVGHADRLP
LQMALTELETLAEKLNERKREADQRCEIRHIAKAMNERYLNKLLSNGSRYLIRSDDMVET
VYNERGEIIKTKERRLFLLNDVLMCATPNIRCQDGSGSGSGNAPLDQRFLLKWSVPLSFV
EVLEFGSSEEMVDNSRYPAPHSGEKVVINAKPNKLYMGPGQLYQDLQNLIHDLSLVNQIA
GMIGSLKGNYQNVNSTVAQDWVSGLQRLILKKEEEIRAADRCRIQLQLPGKHDNRAGKLT
YFSAVFNTLSPAIKQSWISNLQMAKLALEEDNLQGWFFADDDGNQIKKQKHPLLLRQMPV
VMSKLQEFKVECAVHNPEPFINTESTADSPVVGHGCVWVASCTNQMGQIAIVAMQNSSPK
VTECFNVESRILCMAFVPAEQPKEDSEKLPQNNGVPAAKASDTPTVCLGMEEGSIIVYKS
SQRSKKIRLQHFFTPDKSTVTSLVYKKPCLYAGLVSGSVAIYSKSQDGSWCCETPRLLKL
GVLPIKAVLAVEDQLWASSGGQIFIISTHTHCVERQLEAHQEEGMVVSHMVVAGVGIWIA
FSSGSTLRLFHTETLEHLQDINIATTVNNILPGNQRVSVSSLLVSHGLLLVGTNLGVTVA
LSVPRLQGIPKVTGRGMVSLHAHNGPVKFLTMATAVRNWSSTLPPSTSSPSSKQMESADA
ESVQPVPDAASSPPLGRGVWLGEAGCTTMALQDSLSSSSCGSLAPSQGSLEHGPEDGALY
DLLHDPAHHQRGRRSSKVEVSSLLVVSGGLGHRRVNKKTKQSRHEDSTSTIMIWQIPLLN
M
NT seq
4326 nt
NT seq
+upstream
nt +downstream
nt
atggatgcggacgagtttcctcccccgcctcctgaaatgctagcagatgatgatgccttc
aatgatgaagatgaaggagaagcttttgactttgacagtggagatgacatccctgaggct
cctccagcacctccaatccttcccactgaggatccgagcccggtggactctttgaccatt
catcccgaggactctcactgcatcccggagcctccaccgccaatctcccattcggaacct
tcatccctggacactacggctgccataagcgaactttcctcagcaggcagagaaacaaca
gaagctaaagagacatctgctgctgagggaactaatgacagggaggaagatttaccacca
ctgccgtctccaccccctcctgttggttatggtgtacagacagatcctagaagcgcggac
gctgaaggaaaagatgcctccctggatgccccacaaccttcaccggctttgcccaggact
tcctctcggactaaagtcaacccttactcagtaattgatatcagtcccatgcagcagcta
gagcagcaacagggaccctcctcttccacttcctcactaactgagtcaaaactacaagag
gaagagggcagggatatcctcaccagctcctccagcattacttcaggatactccgtgcct
gtgccctgtggctatgccaccccctctggtgttcctctcatcacacctgcctataccaca
cctgtcatcattcgacatctctccatggatgaagatgtgacggtggtgggaactagcaac
acctctgctgacagtgttttcagtgaagagtatccacctattgcagaggaagatgctctg
gctaaatgggcatcagatcctgccaacaccgcttggatggaaaacccagatgaggtgatc
tatgatgatgtccccagagagaactcagactctaacacagatccagatgagatgatttat
gatgatgtggagctgggcgaggagggcggctgcagcagctccctcgataatggctggagc
tcgagcgagtttgaaagctacgacgaagccagcgatggggagggtcaccctgaaaatggc
ctcccccatgccttcatgaggggaaagccaccgcagaggaaaatccatctctctcaagat
ctgacacgcttgaaagaacactatgagaaaaagatgaaaggtctaatggcaagtacagtg
ggaacggtagagctgcagcagttaaaacagaaacacgagcagaagatgcaaaagctggtg
aaggcagccaaggaggggacgaaagatggacttgaaaaaactaaagctgcggtgaagagg
gggcgctctttcatcaaaacaaagtcattctgtcaagagagaaagtctgcttgcttagag
ggggagtctgagctcttcattgaagtggactgcttcaacgtggagcccgttctctgtcca
acaccagagggtctcactcagcagcagcttgtgcgaaggtgcatattgggctctatttta
gaaagtgagaaaaattatcttgatgctctcaaaaggattttggagcattatgagaaaccc
ctttcccagattgagcccaagctgctcagcgacaggaagctgaagatcatcttttaccgc
gtgcgggagatcctgcaatgccacttcctgttccagatagctattgcgagccgtgtgtct
gagtgggacagcctggaaatgattggagatgtctttgttgcatcgttttcaaaatccatg
gtgctggatgcttacagtgagtatgtcaacaacttcagcacagcgatggccgtcgtaagg
aagacttgcgcctctaaaccgggtttcctggaatttctcaagcatcgtcaagaaaccagc
agtgaccgaatgactctttatggcctgatgatgaaacccattcaaagattcccacagttc
attctgctccttcaggacatgctaaagaacacaccggtgggtcatgcggaccgtctgccc
ttgcagatggccctgacagagctggagaccttggcagagaaactcaatgaaagaaaaagg
gaagctgaccagcgctgcgaaatccgtcacattgcaaaggccatgaatgaacgctacctc
aacaagcttctaagtaatggtagccgctacctgattcgctcagacgacatggtggagact
gtttacaatgaacgtggtgaaatcatcaaaacaaaagagcgacgcctcttcctgctaaat
gatgtgctcatgtgtgccacgcctaatatccggtgccaggatggcagtgggagtggcagt
ggaaacgctccactggaccagaggtttctcctgaagtggagtgtacctttgagttttgtg
gaagtactggagtttggatccagcgaggaaatggtcgataacagccgataccctgctcct
cactctggggagaaggtggtgatcaacgctaagccaaacaaactttacatgggccctggt
cagctgtaccaagatctgcaaaacctgatccacgatctgagtttggtcaatcaaatcgct
ggcatgatcggtagcctcaaagggaactaccagaatgtaaattccactgtggcgcaggac
tgggtttcaggcctccagaggctaatattgaagaaggaagaggagatcagggcagctgac
cggtgcaggattcaactccagctgcctggcaaacatgacaacagggccggtaagctcaca
tacttcagtgcagtgtttaatacactcagcccagccatcaagcagtcatggatcagtaac
ctacagatggcaaagttggctctagaggaggacaacctgcagggctggttctttgcagat
gatgacggtaatcaaatcaagaaacagaaacaccccctcttacttcgacagatgcctgtg
gtaatgtcaaaactacaagagttcaaggtggagtgtgctgttcacaacccagagcccttc
ataaacacagaaagcacagccgactctcctgttgtcggccacggatgtgtctgggttgca
agttgcactaaccagatgggtcaaatcgctattgtggccatgcagaactccagccctaaa
gtgacagaatgcttcaatgtggaatctcgaatcctctgcatggccttcgtcccagcagag
caacctaaggaggacagtgaaaagcttcctcagaataatggcgttcctgctgcaaaggcc
agtgatacccccaccgtctgtttaggcatggaggagggcagcatcattgtttataagagc
agtcagcggtccaagaaaatacgtcttcagcatttcttcaccccagacaagtccacggtc
accagcctggtctataaaaagccctgtctgtacgccggtctggttagtggctctgtcgcc
atttactccaaatcacaagatggttcctggtgctgtgagacgcccaggttactgaagcta
ggagtccttccaattaaagcggtgctggctgtggaggatcaactctgggcctcatcagga
ggacaaatttttatcatcagcacccacacacattgtgttgagaggcagctggaggcccac
caagaagagggcatggtggtgtctcacatggtggtggcaggggtgggcatctggatcgca
ttcagctccggttctactctgcgcctctttcacactgagacattggagcacctgcaggac
attaacattgccacaaccgttaacaatattctaccaggaaaccagagagtctctgtgagc
agtctgctggttagccacggtttgctgctagtggggactaacttgggagtgactgtggct
ttgtctgtccccagactacaggggatccccaaagtaacaggtcgagggatggtgtcatta
catgcacacaatgggcccgtcaagttcctcactatggcaacggcggtgcgtaactggtca
tctaccctcccaccctccacctcttccccttcatccaagcagatggagtctgcggatgca
gagagcgtccagcctgtcccagatgcagcctccagtcctcctctgggacgcggggtgtgg
ctgggcgaggcgggctgtaccaccatggctcttcaggattctctgtcctcctcctcctgc
ggatccttagctccctcccagggttccttggagcacggtccagaggatggggccttgtat
gacttgcttcatgaccccgcccatcaccagagggggcgtcgctccagcaaggttgaagtc
agctctctgctagttgtgtctggaggcctgggccaccgcagagtcaacaaaaagaccaaa
cagtctcgccacgaggacagcacctccactatcatgatctggcaaatccctttactgaac
atgtga
DBGET
integrated database retrieval system
