Cyprinodon variegatus (sheepshead minnow): 107098966
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Entry
107098966 CDS
T06110
Symbol
dcaf13
Name
(RefSeq) DDB1- and CUL4-associated factor 13
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cvg03009
]
107098966 (dcaf13)
04121 Ubiquitin system [BR:
cvg04121
]
107098966 (dcaf13)
Ribosome biogenesis [BR:
cvg03009
]
Eukaryotic type
90S particles
Other 90S particles
107098966 (dcaf13)
Ubiquitin system [BR:
cvg04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
107098966 (dcaf13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sof1
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_CAF1B_HIR1
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_EML
Beta-prop_WDR75_1st
WD40_RFWD3
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
eIF2A
Beta-prop_IFT140_1st
ANAPC4_WD40
KNTC1_N
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
107098966
NCBI-ProteinID:
XP_015252360
Ensembl:
ENSCVAG00000010337
LinkDB
All DBs
Position
Unknown
AA seq
396 aa
AA seq
DB search
MKVKVLSRNPDDYVRETKHDIQRGKCVNLITSASSLSKQFLVKVWNLTKHECVRTLQAHE
GFVRGMVVRYCGTSFFTIGDDKTIKQWKMEAPGYGEAEEPLNTILGKTVFTGLDHHLKKG
VFATCGQQVDIWDEQRSTPIRSFTWGVDSFSSLRFNPVETELLGSCASDRSIVLYDMRES
TPLKKVIMTMRPNTLCWNPMEAYIFTCANEDYNLYTYDMRYLEKPFKVHMDHVSAVLDVD
YAPTGQEFVSASFDKTIRIFPKDAGHSREVYHTKRMQHVICVKWSADNRYILSGSDEMNI
RLWKANAAEKLGMLAPREKAAINYSQKLKEKFQHHPQIKRIARHRHLPKNIYHQRNELRI
MKEARRRKEMNVRKHSKPGSVPLVSEKEKHVVTVVK
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttaaagtcctctccaggaacccggatgattatgtccgggaaactaaacacgat
attcaacgaggtaagtgtgtaaacctaattacttcagcatcttccctcagcaaacagttc
ttggtgaaggtgtggaatctcaccaaacatgaatgtgttcgtactctccaagcgcacgag
ggcttcgtccggggaatggttgtcagatactgcggcacttccttctttacgattggtgat
gataaaacaataaaacaatggaaaatggaagcaccgggatacggagaagcggaggagcct
cttaacactatccttggcaagactgtgttcacaggactggaccatcacctaaagaagggt
gtatttgcaacgtgtggccagcaggtggacatctgggacgagcagaggagcacccccatc
cgctccttcacctggggggtagacagcttcagctctctccgttttaaccccgtggagact
gaactcctcggaagctgtgcctctgacagaagcatcgttttatacgacatgagggaatca
acacctcttaaaaaggtgatcatgaccatgaggcctaacacgctatgctggaacccgatg
gaagcctatatttttacatgtgcaaatgaagactataacctttacacatatgacatgagg
tacctggagaagcccttcaaagtgcacatggaccacgtctccgccgtgctggacgtggac
tacgctccaaccggacaggagtttgtttctgctagcttcgacaagaccattcgcatcttc
cctaaagacgcaggacacagcagagaagtgtaccacaccaaacgcatgcagcatgtcatc
tgcgtcaagtggtcggcagacaaccggtacatcctgagcgggtcggatgaaatgaatatc
cgactgtggaaggctaacgcagctgagaaactgggaatgctggcccccagagagaaagca
gccattaactacagccagaagctgaaggagaagttccagcaccacccgcagatcaagcgc
atcgcccgccacagacatctacccaagaacatctaccaccagaggaacgagctgaggatc
atgaaggaggctcgccgtcgaaaggagatgaacgtccggaagcacagcaaaccaggaagc
gtccctctggtgtctgagaaggagaagcatgttgtcactgtggtgaaatag
DBGET
integrated database retrieval system
