Cyprinodon variegatus (sheepshead minnow): 107098970
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Entry
107098970 CDS
T06110
Symbol
cthrc1
Name
(RefSeq) collagen triple helix repeat-containing protein 1 isoform X1
KO
K25700
collagen triple helix repeat-containing protein 1
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cvg03037
]
107098970 (cthrc1)
Cilium and associated proteins [BR:
cvg03037
]
Other cilia and associated proteins
Stereociliary proteins
107098970 (cthrc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CTHRC1_C
Collagen
Motif
Other DBs
NCBI-GeneID:
107098970
NCBI-ProteinID:
XP_015252364
Ensembl:
ENSCVAG00000010371
UniProt:
A0A3Q2CSG4
LinkDB
All DBs
Position
Unknown
AA seq
256 aa
AA seq
DB search
MSPLVSRLLLLFCLALPLYGGEKIRNKGLRKEPDPDKCTGNDADKPNCTRHSSDERRSPF
LNSMYGNCMQGPAGTPGRDGNPGANGIPGTPGIPGRDGLKGEKGECISEIFEEPWRPNYK
QCAWNSLNYGIDLGKIADCTFTKLRSDSALRVLFSGSLRLKCKNACCQRWYFTFNGAECT
GPLPVESIIYLDQGSPELNSTINIHRTSSVEGLCEGIKAGLVDVAVWVGTCADYPRGDAS
TGWNSVSRIIIEELPK
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgtctcctctggtgagccgcctgctccttctcttctgcctggccttacctctttatgga
ggggaaaagataagaaataagggattaagaaaggaacctgaccctgacaagtgcacagga
aatgatgcagacaaacccaactgcactagacactcctccgatgagcgaagatctcctttt
ctgaacagcatgtatggcaactgcatgcaaggcccagcaggaacccctggaagagatggt
aaccccggagccaatggcattccaggcactccaggtatcccaggacgtgacgggctcaaa
ggggaaaaaggggaatgcatcagtgagatttttgaggagccgtggagacccaactacaag
cagtgtgcctggaactctctgaattatgggatcgacctgggtaaaatagcagactgcacg
ttcaccaagctgcgttcagacagcgctctcagagtcctcttcagcggttccctacgactc
aagtgcaagaatgcgtgctgccagaggtggtacttcaccttcaatggagccgagtgcaca
ggacccctaccagtggagtccatcatttacttggatcaaggaagtccggagctcaactcc
accattaacatccacagaacatcatcagttgaggggctgtgcgagggtatcaaagccggg
ttggtggatgtggcggtgtgggtggggacctgcgccgattatcccaggggagacgcttcc
acaggctggaattctgtatccaggattatcattgaggaactgcctaaatga
DBGET
integrated database retrieval system
