Cyprinodon variegatus (sheepshead minnow): 107099008
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Entry
107099008 CDS
T06110
Symbol
taf9
Name
(RefSeq) transcription initiation factor TFIID subunit 9
KO
K14535
transcription initiation factor TFIID subunit 9
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107099008 (taf9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cvg03021
]
107099008 (taf9)
Transcription machinery [BR:
cvg03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
107099008 (taf9)
Coactivators
SAGA/TFTC/STAGA complex
107099008 (taf9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIID-31kDa
CENP-S
Bromo_TP
Histone
TAF10
CENP-T_C
PKD_5
TIP49_C
LonB_AAA-LID
TFIID_20kDa
Motif
Other DBs
NCBI-GeneID:
107099008
NCBI-ProteinID:
XP_015252418
Ensembl:
ENSCVAG00000009795
UniProt:
A0A3Q2GG98
LinkDB
All DBs
Position
Unknown
AA seq
247 aa
AA seq
DB search
MSAPKTIPKDAQVMMQILKDMGVTEYEPRVINQMLEFTYRYVTTIIEDAKIYATHAKKSN
VDADDIKLAIQCRMDQSFTSPPPRDFLLEVARQKNQTPLPLIKPYTGPRLPPDRYCLTAP
NYRLKSIQKKVSSSAGRITVPRISVGAVSSRPSTPTLGTPSVQSVSTKVGAPVSLTGQRF
TVQIPSASQTATTKPTTPSTPAVSNVLINQSLIGSKNILITTNMVSQSTGGDSLKRKHED
DDDYDAL
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctccgaaaactatccccaaagatgctcaggtgatgatgcagatcctgaaggac
atgggtgtcactgagtacgagccccgggtcatcaaccagatgctggagttcacctacaga
tacgtgacgaccatcatagaagacgctaaaatctacgccacgcacgccaagaagtccaac
gttgacgcagacgacatcaagctggccatccagtgccgcatggaccagtccttcacctcc
cctcctccacgtgatttcttgctggaggtggcgcgacagaagaaccagactcctcttcct
ctcatcaagccctacaccgggcccagacttcctccggaccggtactgtctgacggcgcca
aactacagactgaagtccatccagaagaaggtgtcttcgtccgccggcaggataacggtt
cctcgcatcagcgtcggcgccgtctccagcaggccaagcactcccactctgggaactcct
tcagtccagtcggtctccaccaaggtgggagctccagtgtctctgacgggtcaaaggttc
acggttcagatcccatcggcctcccagaccgccaccaccaaacccacaacgccttccacg
cccgccgtgtccaacgtcctcatcaaccagtctcttatcggctctaagaacatcctcatc
accaccaacatggtgtctcagagcaccggcggagactctctgaagaggaagcacgaagac
gacgatgactacgacgctttatga
DBGET
integrated database retrieval system
