Cyprinodon variegatus (sheepshead minnow): 107099035
Help
Entry
107099035 CDS
T06110
Name
(RefSeq) dynactin subunit 1-like isoform X1
KO
K04648
dynactin 1
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04814
Motor proteins
cvg05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
107099035
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
107099035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvg04131
]
107099035
03036 Chromosome and associated proteins [BR:
cvg03036
]
107099035
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cvg04812
]
107099035
Membrane trafficking [BR:
cvg04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
107099035
Chromosome and associated proteins [BR:
cvg03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Dynactin complex
107099035
Cytoskeleton proteins [BR:
cvg04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dynactins
107099035
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dynactin
CAP_GLY
dbPDZ_assoc
DUF7259
Motif
Other DBs
NCBI-GeneID:
107099035
NCBI-ProteinID:
XP_015252449
Ensembl:
ENSCVAG00000008925
LinkDB
All DBs
Position
Unknown
AA seq
1274 aa
AA seq
DB search
MSSQGTVESGKAPKIGSMVEVTGKGQRGTVAYIGATLFASGKWVGIILDEPKGKNDGTVQ
GKRYFTCEENHGIFVRSSQIQVIDDGSAATSPETPESTLAKILKQKEIPETPRTTKQTPS
NIKKSSTRRSAKWSTPRLTPATSLPSLLVRPSRISLPLRASRESLSASLSGDVSEGSLSS
QQGALGAPVTPQPSGSPAALAPQTPAPPSKVEPAPTKQEEESLRAQVKDLEEKLETLKMK
RTEDKAKLKELEKHKIQLEQLQEWKTKMQEQQAELQKQLKEAKKEAREAQEAKDRYMEEM
ADTADAIEMATLDKEMAEERAESLQVEVDSLKEKVEELSMDLEILRHEISEKGTDGAASS
YQVKQLEEQNSRLKEALVRMRDLSASEKQEHVKLQKQMEKKNAELETLRTQKEKLQEELK
QAESTIDELKEQVDAALGSEEMVETLTERNLDLEEKVREMRETVTDLEAINEMNDELQEN
ARETEMELREQLDLSTAKVREAEKKVEAAQETVADYQQTINKYRELTASLQEANRELISQ
QSANTEQTQQPPAELFDFKIKFAETKAYAKAIEMELRKMEVAQANRQVSLLTSFMPDSFL
RHGGDHDCILVLLLIPRLICKAELISKQAHEKFDLNSSLAQGTALRGPPGEQRSFASGLV
YSLSLLQATLHKYEQAMNSCSVEVFKHMGTLYSEMSFHERSLDYFIDLLHKDQLDETVQV
EPLTKAIKYYQQLYGVHLADQEEDCTMLLADHIKFTQGALDCMGVEVARLRAFLAPGQES
SSLAVLLKDLDTSCSDIRQFCKKIRRRMPGTDVAGVPAALSFASQVSESLTECRRQLTRV
VAVLQEVAAAGAQMMAPLVEQDGLNALRLEDTVCKVVEQVYVSQGVNGPELLRQSCSSVI
TTMNKMATAMQEGEYDAEKPRGKTPPVEMRAATVRAEMTDAEGLGVKLEDRETVIKELKK
SLKIKGEELSEANVRLSLLEKKLDTSTKDADERVEKIQTKLDESLALLKKKEKEFEETMD
ALQADIDQLEAEKAELKQRIHNQSKMTIEGLRAPPGAGISSIVQGSAGGGLPPSLAGQTQ
VVDSPLLRQQVEVQRLGIKYLKNENNRLKAEKIKAQLASLPPLCPPKLPQVSKESSTPPE
GLNTGIYRRTDQLLATLLKLSAEMKVVDITGKTAVSASSQLLEQTARLKNLKDALDKLQG
EVAEHVVSTQPGARASSDFATFPLSSFVKAKEEKQGGTVFVGRVALPCTRGQEQVHRLVL
SQQQLQKVHSLLMV
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atgagcagccaaggaacagtggagagcggtaaagctccaaagattggctctatggtggag
gtgactggtaaaggccagcgtggtaccgtcgcctacatcggtgctacgctgtttgcctca
ggtaaatgggtggggatcatcctggacgagcccaaaggaaagaatgacggcacggtgcaa
gggaagcgctacttcacctgtgaggaaaatcacggaatattcgtcagatcatcccagatc
caagtcattgacgatggctcggctgccacctcaccagaaacccctgagtccaccctggca
aagatactcaaacaaaaagaaatccctgagacccccagaacaacaaagcagaccccaagc
aacattaagaagtcctctacccgccgctctgcaaagtggagcacgccacgcctcacgcct
gctacctcactcccctccctcctggtgcgtcccagccgcatcagtctgccgctaagggca
tctcgtgagagcctttctgcttctctgtctggagatgtcagcgaggggagcctgtcctcc
cagcagggggcgctgggtgccccagttactcctcagccaagcggatctcctgcagccctg
gctcctcaaaccccagctcctcccagcaaggtggaacctgccccgaccaagcaggaggaa
gagtccctgcgagctcaagtcaaggacctggaggaaaaactggagactctgaagatgaaa
cgaaccgaggataaggctaagctgaaagaactggaaaagcacaagatccagctggagcag
ctgcaggagtggaagaccaaaatgcaggagcagcaggctgagctgcagaagcagctcaaa
gaggccaaaaaggaggcccgggaagcgcaggaagccaaggaccgctacatggaggagatg
gcagatactgctgacgctatagaaatggcaacgctggacaaggagatggctgaagagcga
gcggagtcgctgcaagttgaggtggactcgctgaaagagaaagtagaggagctctccatg
gacctggagatcctgaggcatgagatttcagagaaaggcacagatggagctgcttccagt
tatcaggtgaaacagctggaggagcagaacagcaggctgaaggaggcgttggtcaggatg
cgggacctgtctgcatcagagaaacaggaacatgtgaagctgcagaagcaaatggagaag
aagaatgcagagctggagactctgaggacccagaaggaaaaactgcaggaggaacttaaa
caggctgaatccactattgatgaactgaaggagcaggtggatgcagctctggggtcagag
gagatggtggagacgctgactgagaggaacctggacctcgaagagaaagtcagagagatg
agggagacggtcactgatttggaagccatcaatgaaatgaacgacgagctgcaggaaaat
gccagagagacagaaatggagctgagggagcagctggacctgagcactgccaaggttcgg
gaagcagaaaaaaaggtggaagctgctcaggagactgtggctgattaccagcaaaccatc
aacaagtacagagagctcactgcttcgcttcaggaagccaacagggagctgatcagtcaa
cagagtgcaaacactgagcagactcagcagccgcctgcagagctgttcgacttcaagatt
aagtttgctgaaactaaagcgtatgcaaaggctattgagatggagctgaggaaaatggaa
gtggctcaggcaaacagacaggtttccctgctcacctccttcatgccggactccttcctc
cgtcatggcggcgaccacgactgcatcctggtgctgctgctcattcccaggctcatctgt
aaggctgaactgatcagtaaacaggcccatgagaagtttgacctgaacagcagccttgct
cagggaacggcgctcagaggaccaccaggagagcagcgcagctttgcttcaggactggtc
tactccctcagtctgcttcaggccactttgcacaaatacgagcaggctatgaactcctgt
agcgtagaggtttttaaacacatgggcacactttactctgaaatgagcttccatgagcgc
tcgctggattatttcattgacctgctgcataaagatcagctcgatgagaccgttcaggtg
gagccgctgaccaaggccatcaaatactatcagcaactgtacggcgtccatttggcagat
caggaggaggactgcaccatgctgctggctgatcacatcaagtttacccagggtgccctt
gattgtatgggggtggaggtggctcgtctgcgggcgtttctggcaccaggccaggagagc
tccagcctcgctgtcctgctgaaggacctggacacttcctgctcagatattaggcagttc
tgcaagaagatccgccgtcgcatgcctggaacggacgtagctggagtccctgctgctctc
agcttcgcatcacaggtgtctgagtcgctgactgagtgcaggcgacagctgacccgagtg
gttgctgtactgcaggaggtggctgcagcgggggctcagatgatggctccgctggtagaa
caagatggcctcaatgctctcagactggaggacactgtatgtaaggtggtggagcaggtg
tacgtctcccagggtgtgaacggccctgagctcctgcgacagtcctgcagctctgtcatc
acaaccatgaacaagatggctacagcaatgcaggaaggagagtatgatgctgagaaaccc
agaggaaagactcccccagtggagatgagagccgccacagtcagagctgagatgaccgac
gcagagggtctgggagtaaaactagaagacagagaaaccgtcatcaaggagctcaagaag
tccctcaaaattaagggtgaggagctaagtgaagccaacgtccgcctcagccttttggag
aagaagctggacacctccaccaaagacgcagatgaacgtgtggagaagattcagaccaaa
ctggatgagagccttgctctgctgaagaagaaagaaaaggagtttgaggagaccatggat
gccttgcaggcagatattgaccagctggaggcagaaaaggcagagcttaaacagcgcatc
cataatcagtcaaagatgacgattgaaggccttagagctccccccggtgctggaatcagc
tctattgttcagggatcggcaggaggaggtctgcctccatccctggcaggacaaacacag
gtggtggactcccctctcctcaggcagcaggttgaggtccagagactgggcattaaatac
ctgaagaatgaaaacaacagactgaaggcagagaagataaaggctcagctggcatccctg
cctccactctgccctccaaaactcccacaggtgtccaaagaaagctccacacctccagag
ggactgaacacagggatctaccgtaggaccgaccagctgctcgccacactgctaaagctg
agtgctgaaatgaaggtggtggacatcacaggaaagacagcagtcagtgccagctcccaa
ctgctggaacagacggctcgtctaaagaacctcaaagacgccctggacaaactgcagggt
gaggttgctgaacatgtggtttcaacccagcctggagcaagagcttcctccgacttcgcc
acgttcccgttgtcgtccttcgttaaggctaaggaagagaaacaaggtgggacagtgttt
gtgggtcgtgttgccctcccttgcacccgaggtcaggaacaagtccaccgcctcgtcctg
tcccagcagcagctgcagaaagtccacagtctcctcatggtctaa
DBGET
integrated database retrieval system
