Cyprinodon variegatus (sheepshead minnow): 107099046
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Entry
107099046 CDS
T06110
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase HECW2-like
KO
K12168
E3 ubiquitin-protein ligase HECW2 [EC:
2.3.2.26
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cvg04121
]
107099046
Enzymes [BR:
cvg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
107099046
Ubiquitin system [BR:
cvg04121
]
Ubiquitin ligases (E3)
HECT type E3
107099046
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
HECW_N
HECW1_helix
WW
C2
Motif
Other DBs
NCBI-GeneID:
107099046
NCBI-ProteinID:
XP_015252467
LinkDB
All DBs
Position
Unknown
AA seq
1508 aa
AA seq
DB search
MRPSLATAVLPARTRSHNPPNLAVGAREHLSAPRRRSPHLRHTLSPDNLRTLAERGGAAV
DAVSVVGGPIGLMRANSDTDLVSSQSRSSLTASTLEYTLNRGQNLVISWDIKEEVDATDW
IGLYHIDETSPSNVWDCKNRGVNGTQKGQIVWRLEAGPYFMEPETKICFKYYHGVSGALR
ATTPCITVKNPAVLVEGVAEQVGVEHPRKLISFTLTDLRANGLKKGMFFNPDPYLKMSIH
PGKRNVFPVFSHHGQERRSAIIANTTNPVWHGEKYTFVALMTDILYIEVKDKFAKSRPII
KRFLGQLAIPVQRLIEKIPGVQPVSFPLCRRLPTEHVSGQLQFKVELTLTGPDGASPDSI
IGVSSLNGAPGTPSDDEDLPHPLPGPSCYQGSPHMWEGGAAAFPDKDLPVVRSARFLDPV
VISEQSILQRSLSEGLDAIEAPKGPGERPLGAASPKLCSSFPTHTRLSDILHIDSDEDEE
RSGMNDFPPMPVSPLLMNGEPPDVSGPDEADPFSELRQEHLEEEESALDVMEEAPPEPRV
SMGADLELDDVLEAEVFLEEEEAHVAPDVTHQPLQGSRETPEQEAVRVEDLTSEMDSCSM
ATAPQTVFSSSESGAITMATAMEAEEGAATAIDPGGDAEPPGPSPTATTRDDEEEGEEGG
RAEAAEAEGEPAAAGEQQEVQEEVSVRRRSLQAAGRASKEQEEEETKTPGVGAVDTEHVT
TETEGDEGGGVNGHPVRSLPSVRQDLHRYQRVDEPLPPNWEARIDSHGRIFFVDHVNRTT
TWQRPTGPPAPQGLTRSNSIQQMEQLNRRYQSIRRTITNSDRAEESSSDLLPEAEGELMP
HSVPEYRRESAVAPPSGRSRLSLLLQSPSAKFLCSPDFFTVLHSNPSAYRMFTSNTCLKH
MISKVRRDAHYFERYQHNRDLVTFLNMFSNKQLELPRGWEMKHDHTGKPFFVDHNCRSTT
FIDPRLPLQSSRSTGLLAHRQHLSRQRSHSAGEVVDDSRQTGLPAMPRPSSTFSGSSRSP
YHDVVPVAYNDKIVAFLRQPNIYEILQERQPELSRNPSLKEKVQFIRSEGVNGLARLSSD
ADLVMLLRXARLNLLIIFVLPASLHPPVFLFPGTPRANARAPAPYKRDFEAKLRNFYRKL
ETKGYGQGPGKVKLIIRRDHLLEDAFNQIMCYSRKDLQRSKLYVSFVGEDGLDYSGPSRE
FFFLVSRELFNPYYGLFEYSANDTYTVQISPMSAFVDNHHEWFRFSGRILGLALVHQYLL
DAFFTRPFYKGLLRIPCDLSDLEFLDEEFHQSLQWMKDNDIEDMLDLTFTVNEEVFGQIT
ERELKPGGAGIPVSEKNKKEYIERMVKWRIERGVAQQTESLVRGFYEVVDVRLVSVFDAR
ELELVIAGTAEIDLADWRSNTEYRGGYHDNHIVIRWFWAAVERFNNEQRLRLLQFVTGTS
SIPYEGFASLRGSNGPRRFCVEKWGKITSLPRAHTCFNRLDLPPYPSFSMLYEKLLTAVE
ETSTFGLE
NT seq
4527 nt
NT seq
+upstream
nt +downstream
nt
atgcgtccttcccttgccacagcggtcctgcccgccagaacccgttcccataaccccccc
aacctagcggtgggggcccgcgaacacctgtctgcgccccgcagacgcagcccccacctg
cgccacaccttgagcccagacaacctgcggacgctggcggagaggggcggggcggccgtg
gatgccgtgtcggtggtgggcggacctatcgggctgatgcgggccaacagcgacacggac
ctggtgagctcccagagccggtcctcgctcacagcgtccaccctggagtacacgctgaac
cgcggccagaacctggtcatttcctgggacatcaaggaggaggtggacgccaccgactgg
atcgggctgtaccacatcgatgaaaccagtccgtccaacgtgtgggactgcaagaaccga
ggggtgaacgggacccagaagggccagattgtctggaggttggaggccgggccgtacttc
atggagcctgagaccaagatctgcttcaaatactaccatggagtgagcggagctctgaga
gcgaccaccccctgcatcaccgtgaagaaccccgctgtcctggtggagggtgtcgcagag
caggtgggcgtagaacatccccggaaactgatcagctttactttaaccgacctgcgggcc
aacggcttgaagaaaggcatgttcttcaaccctgacccctacctgaagatgtccatccat
cctgggaagagaaacgtcttcccggtcttcagccaccatgggcaggagcgccgctcagcc
atcatcgctaacaccaccaacccggtgtggcacggagagaaatacaccttcgtggcgctg
atgaccgacatcctctacatcgaggtgaaagacaagtttgctaaaagtcgtccaatcatc
aagcgtttcctgggtcagctggccatccccgtgcagcggctcatcgaaaagatcccagga
gtgcagcccgtcagcttcccgctgtgtcgacgccttcccaccgaacacgtcagcggccag
ctgcagtttaaggtggagctgaccttgacgggacctgatggtgcctctccagattccatt
atcggcgtttcatcgctcaacggagctccagggactccttctgacgatgaagacctgccc
catcctctcccaggtccatcctgctaccagggatctccacacatgtgggaaggcggagcc
gctgcctttccggacaaagacctgcctgtcgtccgatcggccagatttctagatccggtg
gtcatttcagagcagtcgattctccagaggtccctcagtgaggggctggatgccatcgag
gcccccaaagggcctggagagaggcctctgggtgccgcctcccctaaactctgctccagc
ttccccacgcacaccagactcagtgacatattgcacattgactcggacgaggacgaggaa
agatctgggatgaacgactttcctccgatgcctgtatcgccgctgctgatgaacggagaa
cctcctgatgtcagcggtccagatgaggccgacccgttctccgagctcaggcaggaacat
ctggaggaggaggagtctgccctcgatgtaatggaggaagcgcctccagagcctcgagtt
tccatgggtgcagatctggagttagacgacgttctggaggcggaggttttccttgaggag
gaggaggctcatgtcgctccggatgttacccatcaacctttgcaaggcagcagagagact
cctgaacaggaagctgtgcgagttgaagatctaacatccgagatggactcctgctccatg
gcaacagcccctcagacggttttctcctcctcagagagcggcgcaatcaccatggccacg
gctatggaagctgaggaaggagcagcgacagccattgatccaggaggagacgccgagccg
ccgggcccctcaccaaccgccacaacccgcgatgatgaggaggagggggaggagggtggc
cgagctgaagccgcagaggctgaaggagaacctgcagctgccggtgagcagcaggaggtt
caggaggaggtcagtgtgaggaggcggagcctgcaggcagcgggcagggccagtaaggag
caggaagaggaggagaccaagacgcctggggtgggggctgtggacacggagcatgttacc
acggaaacagaaggggatgaaggaggcggcgttaacggccatccggtgcgttcgctcccc
tccgtgcgccaggacctccatcgataccaacgggtggacgagccgctgccccccaactgg
gaggctcggatcgacagccatgggaggatcttctttgtggaccacgtgaacaggaccacc
acgtggcagcgtcccaccggcccccccgccccacagggcctgacccgctccaactccatc
cagcagatggagcagctgaaccgcagatatcagagcatcaggagaaccatcaccaacagc
gaccgagcagaggagagctcctctgacctcctccctgaggcagagggggagctgatgcct
cactccgttcctgagtaccgtcgagagagcgccgtggccccccccagcggccgctcgcgc
ctctccctgctgctgcagtcgcccagcgccaagttcctgtgcagccctgacttcttcacc
gtgctgcattcaaaccccagtgcctaccgcatgtttacgagcaacacctgcctgaagcac
atgatcagtaaggtgcggcgagatgctcattactttgagcgctaccagcacaaccgtgac
ctcgtcaccttcctcaacatgttctccaacaagcagctggagctccccagaggctgggag
atgaagcacgaccacaccgggaagcctttctttgtggatcataactgtcgatcgacgacc
ttcatcgacccccgcctgcccctccagagctcccgatccaccgggcttctggcccaccgc
caacacctgagccgccagcgaagccacagcgcaggagaggtggtggatgactcccggcag
acgggtctgcccgccatgccccgcccctccagcaccttcagtggttccagtcggagcccc
taccacgatgtggtgcctgtggcctataatgacaagatagtggcgtttctacggcaaccc
aacatctatgagatcctgcaggagcggcagccggagctgtccaggaatccgtccctaaag
gagaaggtgcagttcatccgcagtgagggggtcaacgggctggctcgtctctccagtgac
gccgacctggtcatgctgctcaggtgagcgcgccttaatctgctgataatctttgtccta
cctgcttccctccatcctcccgtttttctgtttccaggcacgcctcgggcaaacgctcga
gctcccgctccttacaagagagactttgaagctaaactgaggaatttctacagaaagctg
gagaccaagggttatgggcagggaccaggaaaagtcaagctcatcatccgcagagaccac
ctgctggaggacgccttcaatcaaatcatgtgctactcccgcaaagatctgcagaggagc
aaactctacgttagctttgtgggcgaggacgggctggactacagcggaccgtccagagag
tttttcttcctggtgtccagagaactttttaatccgtactacggcttattcgagtactcg
gccaacgacacgtatacggtgcagatcagccccatgtccgccttcgtggacaaccaccac
gaatggttccggttcagcgggcggattctggggctggcgctggtccatcagtacctgctg
gacgcattcttcactcgtccattttacaagggtctgctccgtattccatgtgaccttagt
gacctggagttccttgatgaggagttccaccagagcctgcagtggatgaaggacaacgac
atcgaggacatgctggacctcaccttcaccgtcaacgaggaggtgtttgggcagatcaca
gagagggagctgaagccgggcggggccggcatccccgtgtctgagaagaacaagaaggag
tacatcgagcgaatggtgaagtggcgtatcgagcgaggagtcgcccagcagacggagagc
ctggtccgaggattttatgaggtggtggatgtgcggctggtgtcggtgttcgatgcccgc
gagctggagctggtgatcgcaggaacggcagagatcgacctggcagactggaggagcaac
acggagtacagaggaggttaccatgacaaccacatagtgattcgctggttctgggcggct
gtggagagattcaacaacgagcagaggctgcggctgctgcagtttgtgacgggaacctca
agtattccctacgaaggtttcgcttccttacgaggaagtaatggaccgcgcagattctgc
gtggaaaagtggggaaagatcacgtccttacccagggctcacacctgcttcaatcgtctg
gacctgccgccgtacccatccttctccatgctctatgagaagctgctgaccgccgtggag
gagaccagcaccttcggcctggagtga
DBGET
integrated database retrieval system
