Cyprinodon variegatus (sheepshead minnow): 107099073
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Entry
107099073 CDS
T06110
Name
(RefSeq) E3 ubiquitin-protein ligase Topors-like isoform X1
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cvg04121
]
107099073
03036 Chromosome and associated proteins [BR:
cvg03036
]
107099073
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cvg03037
]
107099073
Enzymes [BR:
cvg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107099073
Ubiquitin system [BR:
cvg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107099073
UBL E3 ligases
107099073
Chromosome and associated proteins [BR:
cvg03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
107099073
Cilium and associated proteins [BR:
cvg03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
107099073
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-rbx1
zf-RING_5
RING_XB3-XBAT31
zf-C3HC4_4
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
107099073
NCBI-ProteinID:
XP_015252528
Ensembl:
ENSCVAG00000007525
UniProt:
A0A3Q2DVY9
LinkDB
All DBs
Position
Unknown
AA seq
1401 aa
AA seq
DB search
MPLPVRRSTRRGRRKGPDADCLAEVMAPTRMKLRGRRRDAPAAAAPAGGAALEEDEERPR
RSSRRKTTNKAPASADAAPSSSASPPTTSSGTVRPAVAAEASPDSKCPICLDRFNNLAYL
DHCLHRFCFPCIQEWSHNKPECPLCKQPFASILHSVRAEDDFKEYTLQPPRAANPLTAST
FLTTVAAMTSDGSTQHHLRLMLRRHLVAADREALRRRRRRERTAGGRRSSDRMGDWEVFM
HSPPLPLSPYHMSELIMENMGMEEAFRRRDEEQRMVLNELTGLRGAAAPSSRVSRRLMCR
LASRQRLQREGGLAQMSEGEVLGFRKALYQCGIRVRSGSCNPWRQRSINAESFRRSSSHL
NRLQAWLQRELGVLLGSHASLADVVQRTVTRRALHSGLEDTAAIEEDLRPYLLTRTEHFV
HELVNFARSPLGMASYDQQAVYEPPSSAMELDQISTSSDGSSVIAISEGEEEGEDRGGVS
EGAAGGGNDDVTRTGSSLSLSCWDDETPGPSYTSAEPSHSFTSPPAISPAPQQPANQEAG
AGRAEEEECLIVGYKKPIAERTPELVQLSSDSEEEEAEKKKKEEEVEVEVASAAPEKAPP
PLSPAPPSSCIPVIPPSTSGTFRAEQAAGPREAWRRRSRSWSGSSDRSRKSICSLSPDTP
ERRRGGREQRGERRKKKRRRGRDRSRETSRRSGSFCNPNRSIFPPMMARCALSPYDSSGD
SASPRDPGWEFRFTQVSPLSSSVSSRSLSPLCTSPPRTPPTPSYSPKRHHVDKPGGKRKY
KSRHLNSSSRDPSWRPHSNRRRKKEKGRKEGGRREKTGNRRSREDRSPSVEIIYEGTLTA
GTAQPPARKRRRKRHRRTQPTSSPVIITLDSDSSHDGASSSPLSSQQTIDFSDIPPLPLL
PTAGGGGATDPDVGELPVDILDRGSDGSESEAVGRSGAARPVSLENMEDSISLLETSDDQ
TAAEPIRAPGAEGANQDQREPAAAERNGPKPLSRTDPEESPSDRNLLEAILHDLKRVTSH
TDRDSGSGCPAEKMKRTQQENIQNSDCWLEERTGSGPTPNISRQQSQESSSPIRTSSPIR
TSPTIRTSPTIRTSPTIRTSPTIRTSSALKESREAPPLLRRASPVRSNLRNTPPPLKHKD
GGSPQRGAACPQNSGPHCPSGSDPTIGVSPVLIQHPIPPITTLRNPLTKALNSSSGSNPF
PAPGLGSVAPAEPGPSRDHLKLTLPADLRSRLSDLHPLHRSSTSGGPAGPLGLDAPGAVH
LSSWGVYSGMNSSYAFPSRSGSEPPAGGAFSEMQNFGADLPSLSGSASNHMALAPPLSHH
SSGFILPNSNCSAQSQARSDRFQRPESNPAPQNHCSFPQPEVHPHSDSSHLKAPNRTFNQ
TADNPLSDPQSEHRSSQVPPP
NT seq
4206 nt
NT seq
+upstream
nt +downstream
nt
atgccgctcccggtgcggaggtcgacccggagaggaaggagaaaaggccccgatgccgat
tgtttagcagaggtgatggcgccaacacggatgaagcttcgtgggcgtcggcgtgacgcc
ccggctgcagctgctccagcagggggcgctgcactagaggaagatgaagagagacccaga
cggagcagcagaagaaaaaccactaacaaggccccggcgtccgccgacgccgccccctcc
tcctccgcctctcctcctaccacctcctctggaaccgtccgcccggcggtggctgctgag
gcgtctccggattcaaaatgtccgatctgcctggaccgcttcaacaacctggcgtacctg
gatcactgcctgcaccgcttctgcttcccctgcatccaggagtggtcccacaacaagccc
gagtgtccgctctgcaagcagcccttcgcctccatcctgcactcggtccgcgccgaggac
gacttcaaggagtacacgctgcagccgccgcgcgccgccaaccccctcaccgcctccacc
ttcctcaccacggtggcggccatgacgtcggacggcagcacgcagcaccacctgaggctg
atgctcaggaggcacctggtagccgccgatagggaggccctacgcaggcggcgccgcagg
gagcggaccgccggcggcaggaggtccagcgacagaatgggggactgggaggttttcatg
cactcccctcccctccctctctcgccataccacatgtcggagctcatcatggagaacatg
gggatggaggaggcgttccgccgaagggatgaggagcagcggatggtcctaaacgagctg
acggggctccgaggcgcggcggcccccagcagccgggtgtcccggcggctgatgtgtcgc
ctggcgagccgacagcggctgcagagggaaggggggctggcccaaatgagcgagggggag
gtgctgggcttccggaaggcgctctaccagtgcggcattcgggttaggagcggcagctgt
aacccttggcgacagcggtccatcaacgccgagtctttccggcgcagcagcagccatttg
aacagactgcaggcctggctccagcgggagctgggggtcctgctgggctcccacgcctcg
ctcgccgacgtggtccagcgcactgtgacacgccgggccctccacagcggcctggaggac
accgccgctatagaagaagacctgcggccgtacctgctgacgcgcaccgagcactttgtg
cacgagctggtgaacttcgcccgctccccgctggggatggcgagctacgaccagcaggcg
gtgtatgagccgccgtccagcgccatggagctggaccagatcagcacgtcttcagacggc
agctccgtcatcgccatctccgaaggcgaggaggagggggaggataggggaggagtgtcc
gagggggcggcagggggaggtaacgatgatgtcacccgaacaggaagcagcctcagtctg
tcctgttgggacgacgaaacgccggggccctcgtacacctcagccgaaccgtcgcattcc
ttcacatcgccgccagcaatcagccccgcccctcagcagccagccaatcaggaggcagga
gcgggccgcgctgaagaggaggagtgtctgattgtcggctacaagaagccgatcgctgaa
cggactcctgagctggtgcagctttcctccgacagcgaggaggaggaagcagagaagaag
aagaaggaggaggaggtggaagtagaggtggcatcagctgctcctgaaaaggctcctccc
cctctctcccccgcccctccctcttcctgcattcccgtcatccctccgtccacctcaggc
accttcagggcggagcaggcggcgggtcccagggaggcgtggaggaggcgctcccgctcc
tggtcgggaagttcggacagaagcaggaagtccatctgctcgctgagcccggacacccct
gaacggaggcgagggggccgggagcagcgcggggagaggaggaagaagaagaggaggcga
gggcgggaccgtagcagggagacctccaggcggagcggctccttctgcaacccgaaccgc
tccatcttcccccccatgatggcgcgctgcgccttgtcgccatatgactccagcggcgac
tccgccagcccgcgggacccgggctgggagttccgcttcacccaggtctcccccctctct
tcctccgtctcctcccgttccctctcccctctctgcacctccccccccagaacgccgccc
accccctcctactcccccaagcgccatcacgtagacaaacccggcggcaagaggaagtac
aagagccgccacctgaacagcagcagcagggacccctcctggaggccgcatagcaaccgg
agacggaagaaggagaaaggacgcaaggagggcgggaggcgggaaaaaacaggaaacagg
aggtccagagaagaccggagccccagcgtggagatcatctacgagggaaccctcaccgcc
ggcaccgcgcagcccccggcacgcaaacggcggcggaaacgccaccgcaggacgcagccc
accagctccccagtcatcatcaccctggacagcgacagcagccatgacggcgccagcagc
agcccgctcagcagccagcagaccatcgacttctcagacatcccccccctccccctgctg
cccacggccggcggaggcggagccacggacccggacgtcggggagcttcctgtcgacatc
ctggatcgagggtctgacgggtcggagtctgaggcggtgggccggtccggagcggcccgt
ccagtcagcctggagaacatggaggacagcatctcgctgctggagacgtctgatgaccaa
acagctgctgagccaatcagagcgcccggtgctgagggagccaatcaggatcagagggag
cctgctgctgcagagcggaacgggccgaaacctctgagcagaaccgacccagaggagtct
ccgtctgacaggaacctgctggaagccatcctccacgacctgaagcgggtcacctcacac
acggaccgggactctggttctggctgccctgctgagaaaatgaagcggacccaacaggag
aacatccagaactctgactgctggctggaagaaaggacgggttctggtccaactccaaac
atcagccgtcagcagagccaggagtccagctccccgatcagaacatcctccccgatcaga
acctcccctaccatcagaacctcccctaccatcagaacctcccctaccatcagaacctcc
cctaccatcagaacctcctcagcgctgaaggaaagcagggaggccccccccctcctcaga
cgggccagcccggtccgatccaacctccggaacacgcctcctcctctgaagcacaaagac
ggtgggagtccacagcgcggcgccgcctgtcctcagaactccgggcctcactgtccctct
ggttctgacccgactatcggggtgtcgccggttctgatccagcaccccatcccccccatc
accaccctgaggaaccccctgaccaaggcgctgaactcctcctcaggttctaatcccttc
ccagctccgggtctgggttcggtggctccagcagaaccaggacccagcagggaccatctg
aagctgactctaccggctgacctccgctcccggttatcggacctccacccgctccaccgc
agctctacctctggaggcccggcgggcccgttgggtctggacgctcccggcgctgtccat
ctgtccagctggggggtttactcagggatgaactctagttatgcgttcccgagccggagc
gggtcagaaccaccagcaggcggcgccttttctgagatgcagaactttggagcggacctg
ccgtcgctctctggctccgcctccaaccacatggccttagccccgcccctttcccatcac
tcctctgggttcatcttaccaaactctaactgcagcgctcagtctcaggcccgttctgac
cggttccagcgccccgagtccaacccagccccgcagaaccactgctccttccctcagcct
gaggtccatcctcactctgactcctcccaccttaaagcgccgaacagaacctttaaccag
accgcagacaatccgctgtctgacccgcagtcagaacaccgctcctcacaggttccccct
ccctaa
DBGET
integrated database retrieval system
