Cyprinodon variegatus (sheepshead minnow): 107099137
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Entry
107099137 CDS
T06110
Name
(RefSeq) homeobox-containing protein 1-like isoform X1
KO
K24885
homeobox-containing protein 1
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvg03000
]
107099137
Transcription factors [BR:
cvg03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
107099137
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
HTH_3
CUT
HTH_31
DUF494
HTH_26
AbiJ_NTD3
HTH_37
HTH_24
Motif
Other DBs
NCBI-GeneID:
107099137
NCBI-ProteinID:
XP_015252626
Ensembl:
ENSCVAG00000005119
UniProt:
A0A3Q2DU71
LinkDB
All DBs
Position
Unknown
AA seq
503 aa
AA seq
DB search
MFQQSEEPRFTIEQIDLLQRLRRTGITQVEVLHALDTLDHLDRQNGHKQSRKASYLPPTS
SLSSSNSVSASSSTTSASTQTVFPQNPLSLSPGTNLDTVSPPLPVPTASPVVVQNGLSGA
TNGKLSPPRYPLAVVGGSVAAPGFGFEASEEDLDLDDKVEFLMRRDSSAIKEEIKSFLAN
RRISQAVVAQVTGISQSRISHWLLQQGSDLSEQKKRAFFRWYQLEKNNPGATLAMRAAPL
ALEDVMDWHQTPPPFNSAPGGFRLRRGSRFTWRKECLAVMESYFSDNQYPDEAKREEIAT
ACNAVIQKPGKKLSDLERVTSLKVYNWFANRRKDIKRRANIEAAILESHGIEVESPGGQS
NGDEVDGNDFPDQGCDVSLFEKRASARPFPFSRADLSSPTQVPPQLPSWFSALARGAASG
QRGASLIGRSLVSGSSSQAEGSRTTGASWSPTSPSLQEESDPQEPLTSEKTAAGRNSPAS
ANQGDGAGCIAGNQIKMESMDHD
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgttccagcagagtgaggagcctcgtttcaccattgaacagatcgatctcctccagagg
cttcgacgaaccggtatcactcaggtggaggtcctccacgccctggacaccctcgatcac
ctggaccgccagaatggccacaagcagagccgtaaagcttcctacctgccgcccacttct
tccttgtcttcctccaactccgtctctgcctcttcctccaccacctccgcctccactcag
acggttttcccacaaaacccactctcgctgtctcccggcaccaacctggacaccgtctcc
ccgcctctgcccgtccccacagcttcgcccgttgtcgtccagaatggcctctccggcgcc
accaacgggaagctttctccgcctcggtatcctctggctgtggttggtggcagtgtggct
gcaccaggctttgggttcgaggccagtgaagaagacttggatctggacgataaagtggag
ttcttgatgaggagggacagcagcgccatcaaagaggagatcaagtccttcctggcgaac
agacggatttcccaggctgtagtcgctcaggtaacagggatcagtcagagtcggatctcc
cactggctcctgcagcagggatcggacctgagcgagcagaagaaacgggccttcttccgc
tggtaccagctggagaagaacaaccctggtgccaccttagcgatgagagccgcccctctg
gctctggaggacgtgatggactggcatcaaactccgcccccatttaactccgccccggga
ggcttccgcctgagacgaggcagcaggttcacctggaggaaggagtgtctggctgtcatg
gagagctacttcagtgataaccagtaccccgatgaagccaagagggaggagatcgctact
gcctgcaacgctgtcattcaaaaaccaggaaagaagctatctgatttggagagagtgacg
tccctcaaggtctacaactggtttgccaaccgccgcaaagacatcaagaggcgcgccaac
atagaagcagccatcttggagagccatggtatcgaggttgagagtccaggaggtcagtcc
aacggcgacgaggtagacggcaacgacttccccgatcagggctgtgatgtttccctgttt
gaaaagagagcttcagccaggccgtttcctttcagtcgagcagacctgtcctctccaacc
caggttcctccgcagctccccagctggttttctgccctggccagaggagccgcttccggg
cagaggggcgcctccctgatcggacgctccctggtgtcggggtccagctctcaggcagaa
ggatccagaacgacgggcgcatcctggtcccccacgtccccgtccctccaggaagaatct
gacccccaggagccgctcacgtcagagaagacggcagccggtcgcaacagcccagcctca
gccaatcagggggatggagcaggatgcatcgcggggaatcagatcaagatggaaagcatg
gatcatgactga
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integrated database retrieval system
