Cyprinodon variegatus (sheepshead minnow): 107099247
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Entry
107099247 CDS
T06110
Name
(RefSeq) transcription initiation factor TFIID subunit 6-like
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107099247
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cvg03021
]
107099247
03036 Chromosome and associated proteins [BR:
cvg03036
]
107099247
Transcription machinery [BR:
cvg03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
107099247
Coactivators
SAGA/TFTC/STAGA complex
107099247
Chromosome and associated proteins [BR:
cvg03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
107099247
STAGA complex
107099247
TFTC complex
107099247
SAGA complex
107099247
SLIK complex
107099247
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
TFIID-31kDa
CENP-S
CBFD_NFYB_HMF
Bromo_TP
Motif
Other DBs
NCBI-GeneID:
107099247
NCBI-ProteinID:
XP_015252787
Ensembl:
ENSCVAG00000021560
UniProt:
A0A3Q2EHU1
LinkDB
All DBs
Position
Unknown
AA seq
636 aa
AA seq
DB search
MAEERRQKQCSVSLPTESMKAMAESVGVGQLQEESCVALSEEVSYRIKEIAQDALKFMHH
GKRRKLTTSDIDNALKLKNVEPLYGFQSQEFIPFRFASGGGRELHFYEEKEVDLSDIINT
PLPRVPLDVSLKAHWLSIEGVQPSIPENPPPASKEQQKAESTEPLKVVKPGQEEKGPVQG
KGQNTPTPDNKGKEKGLIRLKPRSTHELSVEQQLYYKEITEACVGSCEAKRAEALQSIAT
DPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYLHELIPAV
VTCIVSKQLCLRPDVDNHWALRDFAARLMAQSCKTFSTTTNNIQSRITKTLTKSLLDDKT
QWTTRYGSIAGLAELGPDVIKTLILPRLAVEGARIKAVMEGPVVSNIDKIGAEHVQSLLL
KHCASVIAKIRPQPDLVEQYRTDYGYLGTMLCSHVMKARTQAALQAQQVNRTTLTITQPR
STLSVSQSGLSGSSGPRTPSIIKVPSSLALMSPRPGTPSQPSPPATKYIVMGTSSGAAST
QQVITLSSSQSASPVTSTVPSATSTLQPLVKLEPGSGPGLTASRPLQKYIVVSLPSSASS
LETKTSVLPTSISSTPVDGVKMERSDSPAASTQSPH
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggaacgtcggcagaagcaatgctctgtcagccttcccacagagtccatgaaa
gccatggcagagtctgtgggagtgggccagttacaggaggaaagctgtgtggccctcagt
gaggaagtcagctacagaatcaaagaaattgcacaagatgctctaaaattcatgcatcac
ggaaagaggcgtaaactaaccaccagtgacatagacaacgctctgaagctaaaaaatgtg
gagcccctgtacgggttccagtcgcaggagtttattccttttcgctttgcgagcggcggt
ggaagagagcttcatttctacgaggaaaaggaggtggacctcagtgacattataaacaca
cctcttccacgggttcctttagatgtttctctcaaagctcactggttaagtattgaagga
gttcagccgtcgattccagaaaacccaccaccagcatcgaaggagcagcagaaagctgag
tcgactgaaccccttaaagtagtcaaacctggtcaggaggagaaaggtccagttcaaggc
aagggtcagaacacgccaactcctgataacaaaggaaaggagaagggtctaattaggttg
aagccacgtagcacccatgagctctctgtagaacagcagctatactacaaggaaatcact
gaagcatgtgttggctcctgtgaagctaaaagagctgaagctctacagagtatagctaca
gatcctggactgtatcagatgctccctagattcagcacatttatttctgaaggagttcgt
gttaatgtggtgcaaaacaacttggctctactgatttatctaatgcgaatggtgaaagct
ctaatggacaaccccactttgtatttggaaaaatatctgcatgagctgatcccagccgtg
gtcacctgcattgtgagcaagcagctgtgtttacggccggacgttgacaaccactgggct
ttacgggactttgcagctcgcctgatggcccaaagctgtaaaacattcagcaccactacc
aataacattcagtcccgtatcaccaaaactctcaccaagagtttgttggatgacaaaacc
cagtggacgacccgatacggctccatcgcaggcctcgctgaactgggacctgatgtgata
aagacgctgatccttcctcggcttgctgtagagggcgctcgcatcaaagcggtgatggaa
gggcctgtagtctccaatattgacaagataggagctgaacatgtccaaagcctcctgctg
aaacattgtgcgagtgtcattgccaagatccggcctcagccggacctcgtggagcaatat
cgtacggactatggctacctcggcaccatgctgtgttctcatgtaatgaaggccaggact
caagcagcactgcaagctcagcaagtcaaccgtaccaccttaacaatcacacagcctcgt
tccaccctctcagtctcgcaaagtgggctcagtgggtcaagtgggcctcgcactcccagc
atcatcaaagtccccagctccctcgccctcatgtccccgagacccggtactccgtctcaa
ccatcgcctccggcaacaaagtacatcgtcatgggaaccagttcaggagctgcctcaacc
cagcaggtcatcaccctcagctcttcccagtcagcctcaccagtaaccagcaccgttccc
agtgccacttccacactgcagcctttggtaaaactagagcccggcagcggccctggactc
acggcttcgcggcctctgcagaagtacatcgttgtgtctcttccctcgtctgcctcctcc
ttggagaccaagacctctgtgctaccgacctcaatttcctcaactccagtcgacggagtg
aaaatggaacgctccgattcccctgcagcaagcacccagtccccacactga
DBGET
integrated database retrieval system
