KEGG   Cyprinodon variegatus (sheepshead minnow): 107099363
Entry
107099363         CDS       T06110                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB3-like
  KO
K03011  DNA-directed RNA polymerase II subunit RPB3
Organism
cvg  Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03020  RNA polymerase
cvg03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cvg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    107099363
  09124 Replication and repair
   03420 Nucleotide excision repair
    107099363
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cvg03021]
    107099363
   03400 DNA repair and recombination proteins [BR:cvg03400]
    107099363
Transcription machinery [BR:cvg03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     107099363
DNA repair and recombination proteins [BR:cvg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      107099363
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L
Other DBs
NCBI-GeneID: 107099363
NCBI-ProteinID: XP_015252934
Ensembl: ENSCVAG00000017931
LinkDB
Position
Unknown
AA seq 228 aa
MPYANQPTVKITELTDENVKFVIENTDLAVANSLRRVFMSEVPTIAIDWIQIDANSSVLH
DEFIAHRVGLIPLTSDDIVDKMQYSRDCTCDDFCPECSVELTLDVRCTEDQTRHVTSRDL
LSNNPRVIPVTSRSRDNDPNDYVEQDDILLVKLRKGQELRLRAYAKKGFGKEHAKWNPTA
GVSFEYDPDNALRHTVYPRPEEWPKSEYSEIEEDEVQAPYDPNGKPER
NT seq 687 nt   +upstreamnt  +downstreamnt
atgccgtatgccaaccagccgacggttaaaataacagaactgacggacgaaaatgtcaag
tttgttatagaaaacacggatttggcggttgcaaactctctccgccgtgtcttcatgtca
gaggttcccacaatagccatcgactggatccaaatcgatgccaattcgtccgtgctgcac
gatgagttcatcgcacacagagtcggcctcattcccctcaccagcgacgacatagtggat
aaaatgcagtattcaagggactgcacctgtgatgacttctgtccagagtgctctgtggag
ctgactctggacgttcgatgcacagaggaccaaacgcgccacgtcacctcccgtgatctg
ctctccaacaaccccagagtcatccctgtcacctccagaagcagagacaacgatccaaac
gactacgtcgagcaggatgacatcttgcttgtgaagctacgtaaaggtcaggagctgcgg
ctcagagcgtacgccaagaagggctttggtaaggagcacgccaagtggaacccgactgct
ggggtgtccttcgagtatgacccagacaacgcgctgcggcacacagtatatccacgcccc
gaggagtggccaaagagcgagtactctgagattgaggaggatgaagttcaggccccttat
gacccaaacggcaagccagaaaggtga

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