Cyprinodon variegatus (sheepshead minnow): 107099399
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Entry
107099399 CDS
T06110
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C-like
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04020
Calcium signaling pathway
cvg04080
Neuroactive ligand-receptor interaction
cvg04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
107099399
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
107099399
04082 Neuroactive ligand signaling
107099399
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cvg04040
]
107099399
Ion channels [BR:
cvg04040
]
Ligand-gated channels
Glutamate (ionotropic)
107099399
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Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan-Glu_bd
NMDAR2_C
SBP_bac_3
Lig_chan
Motif
Other DBs
NCBI-GeneID:
107099399
NCBI-ProteinID:
XP_015252981
LinkDB
All DBs
Position
Unknown
AA seq
974 aa
AA seq
DB search
ILEEYDWAEFAVITSLLPGYDTFVDIVQSYTDTSYFLWNLQDIMSLEMHMLNVTWERKEL
SFNNQGFLSNPSMVIIALDREKLWDKVGTFARGILQVRYPIWPRYGSFLEHISDDRHLTV
ATLEEHPFVMVENVDPGTGTCVRNTVPCRRQANHSDSTVHSESYTKLCCKGFCIDILKKL
SKTIKFSFDLYLVTNGKHGKLVHGIWNGMIGEVFYRRADMAIGSLTINEERSEIIDFSVP
FVETGISVMVARSNGTVSPSAFLAVPLQFQKPQEHYPPFRFGTVPNGSTERNIRSNYPDM
HTHMMKYNQKGVEEALESLKTGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGY
GIALEKNSRWKRPIDLALLQFLGDGDTERLETVWLSGICQNEKNEVMSSKLDIDNMAGVF
YMLLVAMGLSLLVFAWEHLLYWKLRHSLHKSHKLDFLLAISRGIYSCFKGVEDPGRSSGL
AKPDLTSNYAQANMLKMLRTAKDLVSTANVESSLDNATKTIEQLTRHGGSMPVRVPQVTT
ESVPGGFAYVAENHCPIPQGSLTPPLTCVTSLKQHRGVTRPTPLRYTLPTRSTSCLYERP
LPVSSLSTPHLALGESLPHQHPHHYQTTGRVYVDSHCHSPFIAYSDLQLPDIYTSHPLAS
SQNQHVQMGFSQPKRRARSFQCENEDVERRTHGDQGKIDKSTISLTELKANHLQENHISN
PSVDNVYSGEGMCPRVENYSSWPPEDLAQRGRRRHRRPSFLKATWGNDQIRQFDESQSSL
SSQSPSTLPDLFPCNVTPTSAKPYNPAHVRNNLCLPRNQAYLHIREDQRRPNGRKGQRLR
YSQSTHLPTYGEAVRNGNGLGRGMVRRATSLLSRQYSHYLNSYPGLPIYHSPLDLQHHSH
SSSPVCQLLACGGGRCGGQRSLLHQDNVYGAYGVYQATQAGSEGQVGQGGAGQPVGSPCV
LRPWRRVSSLESEV
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atcttggaggaatacgactgggccgagtttgcagtgatcaccagcttgctgccgggctac
gacaccttcgtggacatagtccagtcgtacacagacacgtcctactttctatggaatctg
caggatatcatgtctctggaaatgcacatgctgaatgtaacatgggaaagaaaagagctt
tcgttcaacaatcaaggatttctttccaacccctctatggtcatcattgcattggaccgg
gagaaactgtgggacaaggtaggcacatttgctcggggcatccttcaggttcgctacccc
atctggccgcgctatggcagcttcctggagcacatatctgatgaccgccatttgacggtg
gccaccctggaggagcatcccttcgtcatggtcgagaacgtggacccaggaactggcacg
tgcgtccgcaacactgtgccctgcaggcgtcaggccaatcattcagacagcactgtccac
tcggagtcctacaccaaactgtgctgcaaaggcttctgcatagacatcctgaagaagttg
tccaaaaccattaagttctcctttgacctctatctggtcaccaacggaaaacacggcaaa
ctggtgcacgggatttggaacgggatgattggggaggtgttttacaggcgcgctgacatg
gccatcggctccctcaccatcaacgaggaacgctctgaaatcattgacttctctgtgcca
tttgtggagacgggcatcagcgtcatggtagctcgtagcaacggcaccgtatcaccgtct
gcctttcttgctgtgcctcttcagtttcagaaaccgcaggagcattatcctccttttcgc
ttcgggacggttccaaacgggagcaccgagaggaacatccgcagcaactatcctgacatg
cacacacacatgatgaaatataaccagaagggagtagaagaagctctggagagtctcaaa
accgggaagctggatgccttcatctacgatgctgctgttttgaattacatggccggaaaa
gacgagggctgcaagctggttaccatcggcagtgggaaagtttttgccaccacaggatat
ggcatcgctctggagaaaaactcccgctggaaacggccaattgacttggctttgcttcag
tttctaggagacggagatacggaacgtctggagacggtctggctttctggaatttgccaa
aacgagaaaaacgaagtgatgagcagcaagttggacattgataacatggcaggtgtcttc
tacatgcttctggttgctatgggcctcagcctgcttgtgtttgcctgggagcatctgctc
tattggaaactacgccactctctccacaagtctcacaaactggacttcctattggctatc
agcaggggtatttacagttgttttaaaggagtagaagatcctgggcgttcatctggattg
gccaaacctgacctgacctctaactatgctcaagcaaacatgctaaagatgcttcgcacc
gccaaggacctggtctctaccgctaatgttgagagctccctggacaacgctaccaagaca
atagagcagttgacccgtcatggaggaagtatgcctgttcgcgttccacaagtcaccact
gagtctgtgccgggaggctttgcttatgttgctgaaaatcactgtcccattcctcaaggg
tcccttactccacctctaacttgcgttacctctctgaaacaacacaggggtgtaactagg
ccaacaccactgcgctacacacttccaactcgttcaacatcatgtctatatgagagaccg
cttcctgtgtcaagcttgagtacgccccatcttgccctaggggagtcgctccctcatcag
cacccacaccactaccagactacagggagggtctatgtagactctcattgtcactcccct
ttcattgcctactctgatctccagctgcctgacatttacacatctcacccacttgcctca
tctcaaaaccaacatgtccaaatgggcttctcccaaccaaaaaggagggccaggagtttt
cagtgtgagaatgaggatgtagaaagaagaacccatggggatcagggaaagattgacaaa
agtactatcagtctgactgaacttaaagccaatcacctccaggagaaccatatctctaac
ccaagcgttgacaatgtttactcaggagaggggatgtgtccccgggtggagaattacagc
tcttggcctccagaagaccttgcgcagagagggagacggagacaccggcgcccctcattt
cttaaagcaacttggggcaatgaccaaattcgtcagtttgatgaatcgcagtcttctcta
tccagccaatcaccttcaaccttgcccgacctgtttccttgcaatgttactcctacatct
gccaagccttataatcccgcccatgttcgaaacaacctgtgcctcccaaggaaccaggcc
tacctccacataagggaggaccagaggaggccgaatggacgcaagggccagagactgcgc
tattcccaatccacccacctccccacatatggagaagcagtgcggaatggtaatggatta
gggcggggtatggtgcgcagagcaacaagcttgctcagtcgacagtactcgcactatctg
aactcataccctggcctcccaatctaccacagcccactggatctccagcaccacagccat
agttccagcccggtgtgtcagttgttggcctgtggtggtgggcgatgtggggggcagcga
agcttgctgcatcaagacaatgtgtatggagcttatggggtctatcaggcaacccaggct
ggctcagagggccaggtggggcaaggtggagcaggccaacctgttgggagtccttgcgta
cttcggccttggcgacgtgtttccagtctagaatctgaagtctga
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