Cyprinodon variegatus (sheepshead minnow): 107099442
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Entry
107099442 CDS
T06110
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1-B
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvg04131
]
107099442
Membrane trafficking [BR:
cvg04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
107099442
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
ig
Ig_2
LRR_Zer-1
LRR_9
Ig_C17orf99
LRR_R13L1-DRL21
LRR_LRWD1
LRRNT
V-set
C2-set_2
Motif
Other DBs
NCBI-GeneID:
107099442
NCBI-ProteinID:
XP_015253048
Ensembl:
ENSCVAG00000015736
UniProt:
A0A3Q2E8T1
LinkDB
All DBs
Position
Unknown
AA seq
623 aa
AA seq
DB search
MTVLVNSRMVSGEAGGHSYLVACWQPILILMLGTVLSGSTTGCPSKCDCNGQERSVVCHR
RRLAALPEGIPTETKLLDLSKNRLKILGPEEFINYPQLEELQLNENTISSIEPGAFSNLM
NLRTLGLRSNELKLIQLGVFTGMVNLTQLDISENKIVILLDYMFQELYNLRALEVGDNDL
VFISPRSFHGLTNLESLNIEGYKLGSVPTDALSHVHNLLSLRLRYLNITDIRDFSFKRLY
RLRVLEISHMPALNTMASQSLYGLNLTSLSITNCNLSAIPYEAISHLRYLRFLNLSFNPI
HTVEGNRLFNLQKLQAFHLAGGNLVAIEPYSFRGLNHLRILNVSRNHLSTLEESVFHSVG
NLETLALYENPLACDCRLLWVFRRRWRLNFNKQQPICVSPEIVQGKEFKDFPDVLPPDYF
ICQKSKIVDYKVLESHVDEGTTVHFSCEAEGDPAPLIMWLSPKKEYITTKTMGSRLSVSS
EGTLEVRYAQIQDNGTYLCIASNAAGNDTKAAHLFVHSYSPNWPHQPNKTFAFISNQPSD
EGANVTRATVPFPFDVKTLIVATTMGFISFLGVVLFCLVILFLWSRGKDSTKSTIEVEYV
PRKEETEEASPTEAPVQFNMKIM
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgacagtcctggtaaacagtaggatggtgtctggagaggcaggagggcacagctacttg
gtggcatgctggcagcccatcctgatcctgatgctgggcactgtcctttcaggctccacc
actggctgcccttcaaaatgtgactgcaatggccaagagcgttccgttgtctgtcatcga
agaaggctggcagctcttccagagggaattcccactgaaacaaaactactagacctcagc
aaaaatcgtctgaaaattctggggcctgaggaattcattaattatccacagttggaggag
ctgcagctgaacgaaaacaccatttcatcaattgagccaggggcttttagtaacctaatg
aatcttcgaactctaggcttgcgcagcaacgagctgaagctcattcagctaggagtattc
acaggcatggtcaacctcacacagttggatattagcgagaataaaattgtgattttgctt
gattatatgttccaagagctgtacaacctgagggctttggaagttggggacaatgaccta
gtctttatatcaccccgatcatttcatggtcttaccaatcttgaaagcctcaacattgaa
gggtataaattgggctcagttcccactgatgccctcagccatgttcacaacctgctatca
cttcgattacgctatctgaacatcactgacataagggacttctcctttaaaaggttgtat
cgactaagagtactggagatttctcatatgcctgccttgaatactatggcctcacaaagt
ttgtatggactcaaccttacatcgttgtccatcacgaactgcaatctgtctgccatcccc
tatgaagccatcagtcatctcagatatcttcggtttttgaatctatccttcaatcctatt
catactgttgaagggaaccgactcttcaatctacaaaagctccaggcctttcacttggct
ggtggaaatttggtggctattgagccctactcttttaggggtctcaaccacctccgtatt
cttaacgtgtcaagaaatcacttgagcacccttgaggagtctgtttttcattcagtagga
aatctggagaccctggctttgtatgaaaaccctttggcctgtgactgccgcttgctatgg
gtgttccgccggagatggaggcttaactttaacaaacaacagcccatttgtgtttctccc
gagattgtgcaaggtaaagagttcaaagatttcccagatgtactgcctcctgactacttc
atctgccaaaaatcaaaaattgtggattacaaggttctggaaagccatgtggacgaagga
actactgttcacttctcttgcgaggctgaaggtgatccagctccacttataatgtggcta
tcccccaagaaggagtacattactacaaagactatgggatcaagactttctgtatccagt
gaaggtacactggaggtccgctatgcccaaattcaggacaatgggacatacttgtgcatt
gccagtaatgctgctggcaatgacaccaaagctgctcacctttttgtacacagctactcc
cctaattggccccatcagccaaataagacatttgcttttatctctaaccagccaagcgat
gaaggtgctaatgtgaccagagcaacagttccatttccatttgatgtaaagacacttatt
gtggcaaccacaatgggattcatctcatttcttggagtggttctcttctgtcttgtaatt
ttatttctgtggagtagaggaaaagacagcactaagtcaactattgaagttgaatatgtg
ccacgcaaagaggaaacagaggaggccagtccgacagaggcacctgtacaattcaacatg
aaaatcatgtga
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