Cyprinodon variegatus (sheepshead minnow): 107099446
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Entry
107099446 CDS
T06110
Symbol
trpm5
Name
(RefSeq) transient receptor potential cation channel subfamily M member 5 isoform X1
KO
K04980
transient receptor potential cation channel subfamily M member 5
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cvg04040
]
107099446 (trpm5)
Ion channels [BR:
cvg04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
107099446 (trpm5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSDAT_euk
LSDAT_prok
Ion_trans
SesA
Motif
Other DBs
NCBI-GeneID:
107099446
NCBI-ProteinID:
XP_015253051
Ensembl:
ENSCVAG00000015677
UniProt:
A0A3Q2FY17
LinkDB
All DBs
Position
Unknown
AA seq
1229 aa
AA seq
DB search
MPEKQDTPLKPLEPQTRCLRCGETLEWSEEHSVLLGCSCCSAVDEAIENVARGLANKMEE
KTHWAAGRVGDIDFIGSTKTKGKFVRVCSNTDPVLIYKMLTEEWGLSPPHLVVALVGGDE
LAQMKPWLRDTLRKGLVKAAQSTGAWILTNGLRFGITKHLGQAVRDHSLASTSSKVRVVA
IGIAPWNMIHNREALLTAKVDEPAVYRPQDLPHGSVYSLDSNHSHFVLVEEDPNRPGATS
EMRVKLLKHISLQRTGYGGAGSFEIPVLCLLVHGEPRILKRMYKGIGNSTPWLILAGSGG
VADILVTLMNRGCWDADSVHELLLDTFPNAHHSTDISNWVKLIQKILDHGHLLTVHDPEQ
ESSELDTVILKALVKACKSQSQEAQDFLDELKLAVAWNRVDIAKSDIFNGDVEWKACDLE
EVMMDALINDKPDFVRLFVDNGVNLGEFLTYGRLQELYWSVSEKSLLHNLLLKKYEEKQL
LLGAARTPGPPGHHPSEQGKPRFTLFEVAKVLKDFLHDSCKGFYQKMPAEKPPKGRLFHS
QKNLPEFEERCEHPWRDLFLWAVLQNRQQMANYFWAMGPEAVAAALAGCKILKEMARLES
EAESARSMKEAKYEQFALDVFGECYSNSEDRAYALLVRRTHCWSKSTVLNLATEADAKSF
FAHDGVQALLTKLWWGAMTTDTAISKLVVSFFIPPLIWTNLIKFSEEELDNRDGKKEFVE
LDSLDTEKALLLTDDDPLDSSPGGQTSQSCATVWWRFLLRRWRRFWSAPVTVFLGNVIMY
FAFLCLFTYVLLLDFRPPPPFGPGVPEILLYFWVFTLVLEEIRQSFFTDEEMSILKKFKL
YVEDNWNKCDMVAILLFVVGVSCRMSNGTYEAGRTVMAIDFMVFTLRLIHIFAINKQLGP
KIIIVERMMKDVFFFLFFLSVWLIAYGVATQALLHPNDPRIDWVFRRALYRPYLHIFGQI
PLEEIDAARFPDINCTNEPEEIIQGLLPPCPNLYANWLVILLLVIFLLVTNVLLLNLLIA
MFSYTFQVVQGNTDIFWKFQRYNLIVEYYSRPALAPPFIIISHISQLFLCMVKRPESKQE
HLERELPAGLDQRLITWETVQKENYLAKVERQHWESSEERLKSTSSKVQNLLKIVGRFKD
QEKRLVSVESQVRYCAEVLSWMAECFTKSTLKCEKDAPKAPTSLTGTKADSTAETSQSHQ
EQEARQKEEESKPGHPGYGANKKFPYIDE
NT seq
3690 nt
NT seq
+upstream
nt +downstream
nt
atgccggagaagcaagacacacctctgaagccactggagccacaaacacgatgccttcgg
tgtggggaaaccctggagtggtcagaagaacacagtgtcctccttggctgctcatgttgt
tctgcagtggatgaggctattgagaatgtagccagaggcctagccaacaaaatggaggag
aaaactcactgggcagctggaagagtgggtgacattgactttattggatctacaaagact
aaagggaagtttgtgagggtgtgcagcaacacagacccagttttgatttacaagatgctg
acggaggagtggggactctctcctccacacttggtagtggcattggtgggaggagatgag
ctcgctcagatgaagccctggctcagggacactcttagaaaaggacttgtgaaagcggca
cagagcacaggggcatggattttaactaacggtctgcgctttgggataaccaagcacttg
ggtcaggcagtgagagatcactccttggccagcacctcctctaaagttcgtgtagtggcc
attggtatcgcaccctggaacatgatccacaaccgagaagctctccttactgccaaggtg
gatgagcctgcagtatacagaccacaggatttgccccatggctcagtgtattccttggac
agtaaccattctcattttgtgcttgtggaagaggatcccaacagaccaggagccacgagt
gaaatgagagtaaagctgctcaaacacatctcccttcagcggaccggttatggaggagca
ggaagttttgagatccctgttctgtgtctcctggtccacggggagcccaggatcctaaag
aggatgtataaaggcattggaaattccacaccctggctgattctggcaggctctggaggc
gtggctgacatcctagtcacgctgatgaacagaggctgctgggacgcagacagcgttcat
gagctgctgttggacacctttcctaatgcccaccacagcacggacatcagtaactgggtc
aagctgatccaaaagatactcgatcatgggcaccttctgactgtccatgacccagaacag
gaaagctccgagctggatacagtcattctgaaagctcttgtcaaggcctgtaagagtcaa
agtcaagaagctcaagactttctggatgagctgaagctggctgtggcctggaacagagtg
gacatcgccaagagtgacatttttaacggagatgtggaatggaaggcttgcgaccttgag
gaggtgatgatggatgccctcattaatgacaaaccagactttgttcgcctctttgtggac
aacggggtgaacctgggggagtttcttacctatgggcgcctacaggagctttactggtct
gtgtcggaaaaaagtctcctccacaacctgcttctgaaaaagtatgaagagaagcagctc
ttgcttggggcagcaaggacacctggtccaccaggacaccatccctctgagcaaggaaaa
ccacgtttcaccctttttgaagtagccaaagtcctgaaggacttcctgcatgactcttgc
aaaggcttttaccaaaagatgcctgctgagaaaccaccaaagggccgattgttccacagc
cagaagaacctgcctgagttcgaggagcgctgtgaacatccttggcgagatcttttcctc
tgggctgtccttcagaaccgacagcagatggctaactacttttgggccatgggccccgag
gcggtagcagcagctctggcaggatgtaagattctgaaagagatggcacgcctggaatct
gaggctgagtctgcacgcagcatgaaggaggccaaatacgagcagtttgcccttgatgtc
tttggagagtgttattccaacagtgaagacagggcttatgctttgttggtgagaagaaca
cactgctggagtaaatcaacggttctcaacttagcaaccgaggctgatgccaaatccttc
tttgcccacgatggagttcaggctctcctcacaaagctttggtggggcgccatgacaaca
gacactgccatctctaaacttgtggtctctttcttcattccaccccttatctggaccaac
ctcatcaagtttagtgaggaggaactggataatcgggatggtaagaaggagtttgtggag
ctggacagccttgacacagaaaaggctttactgctaacagacgatgatcctttggattct
tctccaggaggtcagacatctcagagctgtgccactgtttggtggcgctttctgctccga
cgctggcgtcgcttctggagtgctcctgtcacagtgttccttggcaacgtcatcatgtac
ttcgcctttctctgcctattcacttatgtgcttcttctagacttccgcccaccgccacct
tttggtcccggagttccagagatactgctttacttttgggtgttcaccttggtgctagaa
gaaatccgacagagcttcttcactgacgaagagatgagcatcctaaagaaatttaagctg
tatgtcgaggacaactggaacaagtgtgacatggtggccattttactctttgttgttggg
gtttcctgcagaatgtccaatggcacctatgaagcggggcggacggttatggccatagat
tttatggttttcactttacgtctcatccacatctttgctataaacaagcaacttggcccc
aagatcatcattgtggaaagaatgatgaaggatgttttcttcttcctcttttttctgagt
gtgtggctaattgcttatggcgtagctacacaggctcttctccaccccaatgacccaagg
attgactgggtgtttcgtagagctttataccgcccttacctgcacatatttggacaaatc
cccctggaggaaatagatgctgctcggttcccggatattaactgcaccaatgaaccagaa
gagattatccagggtctgctaccgccatgccccaatctgtacgccaactggctggtcatt
ctactgctagttatcttccttcttgtcaccaatgtgcttctgcttaacctcctcattgcc
atgttcagctacaccttccaagtggtgcagggtaacacggacatcttctggaagttccag
agatataacctgattgtggaatactacagccgtcctgcgctggccccacccttcatcatc
atcagccacatctctcagctcttcctctgcatggtcaaacggcccgagtctaaacaggaa
caccttgagagggagctgccagcaggactagaccagaggctcataacatgggagacagtg
cagaaagagaattacctggcaaaagtggagcgccagcactgggagagcagtgaggagaga
ctcaagagcacctcctcaaaggttcagaacctgcttaaaattgttggcaggtttaaggac
caagagaagcgactagtatcagtggaatctcaggttagatattgtgcagaggtgctgtcc
tggatggcagagtgctttacaaaaagcacacttaaatgtgaaaaggatgctccaaaagct
ccaacatctctaacaggcaccaaagcagacagcactgcagaaacgtctcaaagtcatcag
gagcaagaagccagacaaaaggaggaagaatctaaacctggtcacccaggatatggagcc
aacaagaaatttccttacatcgatgaataa
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integrated database retrieval system
