Cyprinodon variegatus (sheepshead minnow): 107099492
Help
Entry
107099492 CDS
T06110
Name
(RefSeq) cyclic nucleotide-gated channel rod photoreceptor subunit alpha-like
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
107099492
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cvg04040
]
107099492
Ion channels [BR:
cvg04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
107099492
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
Sec62
PFF1_TM
Nop14
Motif
Other DBs
NCBI-GeneID:
107099492
NCBI-ProteinID:
XP_015253126
LinkDB
All DBs
Position
Unknown
AA seq
711 aa
AA seq
DB search
MPAQCLTTDSEDQSEDDLCPPQSSLLVNRNNSNNNEEEDKEKKQKKKKEKKEKKEKKEKK
KKEKEEKEAKEKEQEKQKEKEKEKEKEKEKEKEKEKEKEKEKEKEKAKEKDKDKPKEIFV
VNPAGNLYYNWLFIITVPVMYNWTMIIARACFEELQHDYILYWIILDYSSDLIYLADMFI
RTRTGYLEQGLMVKDEKLLQENYIKSFQFRLDFLSMVPTDIFYFVLGLDYPEIRINKLLR
IGRLMEFFTRTETKTNYPNIFRIGNLIMYILIIIHWNACLFFSFSKSIGFGADDWVYPAL
DDPDEPAFGEPMRKYAFSLYWSTLTLTTIGETPPPALDSEFLFHVVDFLVGVLIFATIVG
NIATMISNMNAAQAQFQARIDNIKQYMQVRKVSKELELRVIKWFDYLWNNGKAQDEREVL
RYLPDKLRAEIAIQVHMDTLKKVRIFADCEAGLLIQLVLKLRPQVFSPGDYICKKGDIGR
EMYIIKDGKLAVVADDGVTQFVVLGSGSYFGEISILNIKGSKAGNRRTANIRSIGYSDLF
CLSKDDLMESLTEYPDAKAMLEEKGRQILMKDGLIDLDPANIKPEVKELEEKVTKLYSTM
ELMQLKLKKILGNYKNAGTALRQRIADLERLTGEEVEDEDEEEEEKKKEAKEEEAVKKTD
EEVETDKDAKTEEEKDDVAKLEEEESEEGELKASDETDEVKDEESKGEKTK
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgccggcacaatgcctaaccactgacagtgaagaccaaagtgaggatgacctatgtcca
cctcaatccagtcttctggtcaataggaataacagcaacaacaatgaagaagaagacaaa
gaaaagaagcaaaaaaagaaaaaggaaaagaaagagaagaaggagaagaaagaaaaaaag
aaaaaggagaaggaagaaaaggaagcaaaagaaaaggaacaggaaaaacaaaaggagaaa
gaaaaagagaaggagaaagaaaaggaaaaggagaaagaaaaggaaaaagagaaagagaaa
gagaaggaaaaggaaaaggcaaaagaaaaggacaaagacaagcctaaggaaatatttgtg
gttaatcctgcggggaatttgtattacaactggcttttcatcatcacagtaccagtcatg
tataactggaccatgatcatagccagggcctgctttgaggagctacaacatgactacata
ctctactggattatcttggactacagctctgatctaatttacctagcagacatgttcatc
agaaccagaacagggtaccttgaacaaggcctgatggtgaaggatgagaagctacttcaa
gaaaactatattaagagcttccagtttcgtcttgattttctgtccatggtgccgacagat
atcttctattttgtacttggacttgactacccagagattcgcattaacaagctgctgaga
attggccgattgatggagttcttcacaaggaccgaaactaaaaccaactatccaaacatc
ttccgcattggaaatttaatcatgtacatcctcatcatcatccactggaatgcttgcctc
ttcttttcattctctaagtcaattggttttggagctgatgactgggtctacccagccctt
gatgatccggatgagcctgcatttggtgagcctatgagaaagtatgctttcagcctatat
tggtccacactgactctgaccaccatcggtgaaaccccaccaccagctctcgactctgaa
tttctcttccacgtggtggacttcttagtcggagtcttgatttttgctaccattgtggga
aacattgctactatgatttccaatatgaatgctgcccaagcccagtttcaagcccgcatt
gacaacatcaaacagtacatgcaggttcgaaaagtcagtaaagaacttgagctacgtgtc
atcaagtggtttgactacctgtggaataacggcaaggctcaagatgagagggaggtgcta
cggtatcttcctgacaagctaagagcagaaatagccatccaagtacacatggacactctg
aagaaagttagaatatttgcagactgcgaagctggtctgcttatccagcttgtgcttaaa
cttcgtccacaggtttttagccccggagactacatatgcaaaaagggcgacattggccgc
gagatgtatatcattaaagatgggaaactagcagttgtagccgatgatggtgtcacacag
ttcgtagtgttaggaagtggtagctattttggcgaaattagcatcctcaatattaaaggc
agtaaagcaggcaacaggaggactgctaacattagaagcattggttactctgacctcttc
tgcctttccaaagatgacctgatggagtcactgactgagtatcctgatgctaaggccatg
ctagaggagaagggtcgacagattttaatgaaagatggtctcatagacttggatccagct
aacattaagcctgaggttaaggagctagaggaaaaggtcaccaaactgtacagcacaatg
gagctcatgcagttaaagctcaagaagattttgggcaattacaagaatgctggcacagct
cttagacaacgtattgcagatctggagcgcttgactggtgaagaggtggaagatgaggat
gaggaggaagaagaaaaaaaaaaagaagctaaagaggaagaagcagtgaaaaaaacagac
gaagaggttgagacggataaagacgccaaaacagaggaagagaaggatgatgtggctaag
ctggaggaggaggaaagtgaagagggtgaattgaaagcatctgatgaaactgatgaagtg
aaagatgaagaaagcaaaggggaaaagacaaagtga
DBGET
integrated database retrieval system
