Cyprinodon variegatus (sheepshead minnow): 107099520
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Entry
107099520 CDS
T06110
Name
(RefSeq) ATP-dependent RNA helicase DDX19B
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03013
Nucleocytoplasmic transport
cvg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107099520
03015 mRNA surveillance pathway
107099520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvg03019
]
107099520
Enzymes [BR:
cvg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107099520
Messenger RNA biogenesis [BR:
cvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
107099520
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF1028
Motif
Other DBs
NCBI-GeneID:
107099520
NCBI-ProteinID:
XP_015253167
Ensembl:
ENSCVAG00000012986
UniProt:
A0A3Q2CY18
LinkDB
All DBs
Position
Unknown
AA seq
488 aa
AA seq
DB search
MATDSWAQAVDEQEAAAESISSLQIKDKPEENGTVSNATEPSSGAAKSEADGKTKTADED
DKEDKAAQSLLNKLIRNDLVNTTNQVEVLQKDPNSPLYSVKSFEELRLKPQLLQGVYAMG
FNRPSKIQETALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSHVDPNNKYPQCLCVSPT
YELALQTGKVIEQMGKYYPEVKLVYAIRGNKLQRGMKLQEQIVIGTPGTMLDWCSKFKFI
DPKKIRVFVLDEADVMIATQGHQDQSIRIQRMLPKNCQMLLFSATFEESVWSFAQRIVPD
PNIIKLKREEETLDTIKQYYVLCNSKEEKFHALCNIYGAITIAQAMIFCHTRKTAGWLAG
ELSREGHQVALLSGEMQVEQRAAVIERFRDGKEKVLVTTNVCARGIDVEQVSVVINFDLP
VDKDGNPDNETYLHRIGRTGRFGKRGLAINMVDSKMSMNILSRIQEHFNKKIERLDTDDL
DEIEKIAS
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggctacagactcctgggcgcaggccgtggatgagcaggaagccgccgcagaatcgatc
agtagtcttcaaataaaggacaaaccagaagagaacggtactgtttctaatgccacagaa
cccagcagtggggctgcaaaatcagaagctgatggcaaaaccaaaactgcagacgaggat
gacaaagaggacaaggcggcacaatcactgttaaacaagctgatacgaaatgatcttgta
aatacaacaaatcaggtggaagttctccagaaggatccaaactctccgctgtactctgtg
aagtcctttgaggaactacggctcaaaccacagcttcttcagggcgtatatgccatgggg
ttcaaccgaccatctaaaatccaagaaaccgccttacccatgatgctcgctgagcctcca
cagaatctgatcgctcagtctcagtcaggaacggggaaaacggctgcctttgtcctggcg
atgctcagccacgtcgacccaaacaacaaatacccccagtgcttgtgtgtgtcaccaaca
tatgaactggcgcttcagacgggtaaagtcatcgagcagatgggcaaatattatcctgaa
gtcaaattagtctatgctattagagggaataagttgcaacgaggcatgaagctgcaggag
cagatagtcattggtacacctggtacaatgctggactggtgcagtaaattcaaatttata
gatcccaagaagatcagagtgtttgtgttggacgaagccgacgtgatgattgctacacag
ggacaccaggatcagagcatccggatccagaggatgctgcccaaaaactgccagatgttg
ctgttctcagccacgtttgaagagagcgtttggtccttcgctcagcgcatcgtgccggac
cccaacatcatcaagctgaagagagaagaggagacgctggacaccatcaagcagtactat
gtgctctgcaacagcaaggaagagaagttccacgccctctgcaacatctacggagcaatt
accatcgctcaggctatgatcttctgccatacaaggaaaactgcaggttggcttgcagga
gagctgtctagagaaggccatcaggtggcgctgctcagtggagaaatgcaggtggagcag
agagccgctgtaattgaacgcttccgggacggaaaggagaaagtccttgtgaccacaaat
gtctgcgctagaggcattgacgtggagcaggtgtctgtggtgatcaattttgacttgcca
gtcgacaaagatggtaaccccgacaacgagacgtacctccacaggatcggacgcacgggc
cgatttgggaagagaggtctggccatcaacatggtggacagcaagatgagcatgaacatc
ctgagcagaatccaggagcatttcaataagaaaatcgaaagactagacactgacgatctg
gatgaaattgagaaaatcgccagctaa
DBGET
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