Cyprinodon variegatus (sheepshead minnow): 107099542
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Entry
107099542 CDS
T06110
Name
(RefSeq) nectin-3-like protein isoform X1
KO
K06592
poliovirus receptor-related protein 3
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04514
Cell adhesion molecules
cvg04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
107099542
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
107099542
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cvg04515
]
107099542
04090 CD molecules [BR:
cvg04090
]
107099542
Cell adhesion molecules [BR:
cvg04515
]
Immunoglobulin superfamily
Nectin family
107099542
CD molecules [BR:
cvg04090
]
Proteins
107099542
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
V-set
ig
C2-set_2
Ig_2
I-set
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
107099542
NCBI-ProteinID:
XP_015253193
Ensembl:
ENSCVAG00000012024
UniProt:
A0A3Q2FTB4
LinkDB
All DBs
Position
Unknown
AA seq
558 aa
AA seq
DB search
MEARPTNRAQNRRTVSNNGMRLLMFVFILYGAAAGVSSNKVVVPDKVNAVLGKNITLSCL
IEAGSNLSLTQISWERRSPSGPVTLAVYNPDYGTSYAKEYGKRIAFVSPSIRDATITIEG
VGLSDIGTYTCKVTTFPLGNTQASTFVNVSVEPKVYVSAGPAALLDGGDEALVATCIAER
GRPAAEVFWEAELYGRSDGQKQEDLNGTTTVRVNYMWKPQSYAQGKTLTCVVRHPTLQTE
FRIPYKLNVQFAPNISLQGIDQIWYVGQTNVKISCTAKANPPAHDYKWIRMDGSMPEGVK
ISNNNLSFTRPLERNDSAVYRCEVTNDIGRSIQDVTFWVQDPPPTTAAPTTTASPVRYES
GTGKDVDRHRAPFTSPTLASIHDGSLGTIIGGVVGGVLFLILLLILTGACFMRQRRTFRG
DYYTKQYLGPSDMQKESQIDVLQPHELQEVYGDKMSKGSQELKPKLGGDIIYPDYTPERK
DRDDWNDRGDIHRGMKEGNYYPEHYNNQNMHPCGPPVHSPIVNNGSPYLPDDCYENGTDS
DYVSHIDGSVISRREWYV
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggaggctagacccacaaaccgagcacagaaccggaggactgtatctaataacggaatg
cgacttttaatgtttgttttcatcctttacggagccgccgcaggtgtaagcagtaacaaa
gtggttgttcctgacaaagtgaatgcagtgcttggcaagaacatcactctcagctgccta
atagaagcaggatccaacctcagcctcacacagatctcctgggaacgtcgttcaccttca
ggccccgttaccctggcagtttacaatccagactatggcacttcatatgctaaggaatat
ggcaaacgcatcgcattcgtttccccttccatacgagatgccaccattaccatcgaaggt
gttggtttgtccgatattggaacctatacctgcaaagtgacgacttttcctttgggcaac
acacaagcgtcaacctttgtaaatgtttcagtggagcccaaggtgtacgtatctgcaggt
cctgcagctcttctggatggtggggatgaggcgctggtggctacttgcatagcagagcgt
ggccgtcctgccgctgaggttttctgggaggctgagctgtatggtagatctgacgggcaa
aagcaggaggatctgaatggtaccactacagttcgagttaactacatgtggaaacctcag
agttacgctcaaggaaagacgctcacctgtgtggtgcgccacccaactctgcaaacagaa
ttccgcataccctacaagttaaatgttcaatttgcacctaatatatccctacaagggatt
gatcaaatctggtatgtgggtcaaacaaatgtgaaaatcagctgcacagccaaagccaac
cctcctgcccatgactacaaatggatcaggatggatggatcaatgccggaaggtgttaag
atctcaaacaacaatctttctttcacacgtccactggagcgcaatgactcagcagtctat
cgctgtgaggtgactaatgacattggtcgcagcattcaagatgtcaccttctgggttcaa
gatccccctcccaccactgcagccccaactaccactgcctcccccgtccgctatgagtcc
ggaaccggaaaggatgtggaccggcacagagctccgttcacctcccccaccctggcctct
atccacgatggcagccttggcactattattggcggggtagtgggtggggttctcttcctg
attctcctgctgatcctcactggtgcttgttttatgcgtcagcggagaacctttagagga
gactactacaccaaacagtatttgggaccttctgacatgcagaaggagtctcagatagat
gttctacagcctcatgagctgcaggaggtttatggggacaagatgagcaaaggtagccag
gagctgaaacccaaactggggggggacattatttacccagactacactcctgagaggaag
gacagggatgactggaacgacaggggggatattcataggggcatgaaggagggaaactat
tacccagagcactacaataaccaaaacatgcacccctgtgggcctcctgtgcacagcccc
attgtgaacaacggctccccctaccttccggatgactgctatgaaaatggtacagacagt
gactacgtgtcgcatatagacggatctgtgatttcacgcagagagtggtatgtttga
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