Cyprinodon variegatus (sheepshead minnow): 107099575
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Entry
107099575 CDS
T06110
Symbol
adamts13
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 13
KO
K08627
a disintegrin and metalloproteinase with thrombospondin motifs 13 [EC:
3.4.24.87
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cvg01002
]
107099575 (adamts13)
Enzymes [BR:
cvg01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.87 ADAMTS13 endopeptidase
107099575 (adamts13)
Peptidases and inhibitors [BR:
cvg01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
107099575 (adamts13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP1_ADAMTS
ADAMTS_CR_3
ADAMTS_spacer1
TSP_1
ADAMTS_CR_2
Reprolysin
TSP1_spondin
TSP1_CCN
Reprolysin_3
Reprolysin_5
Reprolysin_4
Reprolysin_2
Adt-1
Peptidase_M10
Peptidase_M66
Motif
Other DBs
NCBI-GeneID:
107099575
NCBI-ProteinID:
XP_015253243
Ensembl:
ENSCVAG00000011153
LinkDB
All DBs
Position
Unknown
AA seq
1401 aa
AA seq
DB search
MLAAGRQEPTTPSGYGLKYKTMIVTHTFVTIHLQRDMVTNLLSRPAEVPALNANTAHCSS
LSNKVKPRLRRSTLMPDITHLELLVVVGPDVQQVHKQDTERYILTNLNIASELLRDMTLG
ANMRVHLVRMIILSQPEPEIQMSTNITSSLRSVCDWGRRINPSNDSDPLHADLLLYVTRY
DLELPDGNKQVRGVTQLGGVCSREWPCVITEDTGFDLGITIAHEVGHSFGINHDGVGNSC
SRSGFIMATDGGYNSVDLTWSPCSRQQLLTFFSEGRAECVKDFPALGGSLQDWKPGLYYG
VDDQCRIAFGSTARACSFSNPDLPACRVLSCHVKPEDVGSCKRLLVPLLDGTECAPNQWC
LKGRCVSTDDFGSSVVVNGSWSSWSEFSSCSRTCGGGVMLRTRECNNPRPAFGGIDCEGP
DIEVELCHQQPCEGTQLEFMAEQCSQTDLRPLYLLPNTASFYKWIPAIGFVKGDEQCRYM
CQSDAEDFIVSRGSHFVDGTRCESDSSTPYGATAACLRGRCQLFGCDGVLHSGKAWDVCG
VCGGNGSTCILTSDSYSGGRAKEYTTFLTLPVNASQVYIVNSGPVFTHLAVMVGGEYIVS
GTGAMSLNITHPSPLDEDYIQYRLHLTPDHLPETEEVVLPGPLKQEITIQVYRKYGPEYG
EKTNPNISFQFYVPRNKSLADSLPRGKWTAFTTPCSVTCGLGIEKHEHVCVDEHTNNLLK
PHHCKAPPPPTALHTTCQLPSCPPRWDAAGFGACSVSCGGGVRVRRVQCVQKHGSDVVKV
PDSECPSDKTPHSVEKCNLHHCPARWSVSEPGNCSAVCGPGEAKRNVSCIRREDGLDVIV
DHKYCLNQIAPPESVPCVVNVCPIGWESKREDQPSLKSSLMPRSRQAAVYVWSPVVSQCS
RTCGNGTLQVWFSCVDHETGQGVPDFHCDASSKPDPYFEMCAVYPCPPMWRSKQGVCSVT
CGGGVAKRVLYCAREADGEEEVLEDYSCSGFPKPTAVIPCNTHSCPARWKVFKTWPCSVS
CDLGVAERNVSCVQFIHGKESVVPDDSCRAAVKPAITVPCLVQVCTFKWEVKPWSQCSAP
CGYGIQSRAVFCMGPSKPEPLSPLFCMHMPKPITIQGCYKGSCGAVALNKTSPIMRTNLT
EKRLPSPVPVHEDAQNGVSVVPPIPTEAVTIPHTTTAIPTTKSGPCGQLLLEESGIVDLK
DAPSRCTVSIGRPLDEVISIKVISSSLDCRQRDYVAFFDRLAFVRKCVQAAGSELTSRTN
VLFVRQNLLTRGNGVVFTYRSERSMKRSHRQDCDIQLFSPSGIFENPVTSNASHTCRVLI
NAPPSVKIRIQALHIGLVFNTTNSQSTYIMIRDMDVLKTTVFNGQQLFLWRSSGNMAEVE
FHGDYLYSKGTFRAEYSFVRL
NT seq
4206 nt
NT seq
+upstream
nt +downstream
nt
atgttggcagctggccggcaggaaccaaccacaccctctgggtatggactgaagtataag
accatgatagtgactcacacgttcgttaccatccacctccagagagacatggtcactaac
ctgttgtctcgtcctgcagaggtccctgccttaaacgccaacactgctcactgcagttct
ctttccaataaagtaaagcctcgattacgtcgctctactctgatgccagacatcacacac
ctagagctgctggtggttgtggggcccgacgtccagcaggtccacaaacaggacacagaa
cgatatattctcaccaacctaaatattgcgtctgagctgctcagagacatgactctgggt
gccaacatgagggtacacctggtccgcatgatcatcctgtcacagcccgagccagagatc
caaatgtccaccaacatcacttcctctctgaggagtgtgtgtgactggggcagaaggatc
aacccctccaatgactcagacccactacatgcagacctcctgttatatgtaacaaggtac
gatctggagctgccagacgggaacaaacaggtcagaggggtgacacagcttggaggggtc
tgctccagggaatggccctgcgtgatcacagaggacacaggcttcgacctgggcatcacc
atcgctcatgaagttggacatagttttggaatcaaccacgacggggtagggaacagctgc
agccggagcggcttcataatggccacagacggaggctataacagtgtggatttgacctgg
tccccctgcagcagacagcagcttctcaccttcttcagtgaaggtagggctgaatgcgtc
aaagatttccctgcactcggaggctccctacaggactggaagccagggttgtattatgga
gttgatgaccaatgtcgtatagcttttggcagcactgcaagagcctgctccttctccaat
cctgacctgccagcttgccgtgttctgtcctgtcacgttaaacctgaagatgtcggctcc
tgtaaacgcctcctggttcctttgctggatgggacagagtgtgcacccaatcagtggtgt
ttgaagggacgctgtgtgtccacagatgactttggttcctctgtggtggtcaatggctcc
tggtccagctggtctgagttttcgtcctgctccaggacatgtggcggaggagtcatgctc
cgtaccagggaatgcaacaacccaagacctgcttttggagggattgattgtgagggtcca
gatattgaggttgaactttgtcaccaacagccttgtgaggggacccagctggagttcatg
gcagagcagtgttctcaaacagacctccgacctctgtacttgctacccaacactgcttcc
ttctacaaatggatcccagctattggatttgttaaaggcgatgagcagtgcaggtacatg
tgccagtcagatgcagaggacttcatagtgagccgtgggtctcattttgtggatggtact
cgctgtgagtcagatagctcaactccatacggcgcaacagctgcttgtctcagaggcaga
tgccagctgttcggctgtgatggagtgctacactctgggaaagcgtgggatgtttgcgga
gtgtgtggtggaaatgggtcgacctgcattttgacatctgactcctacagcggcggtcgc
gccaaagagtacaccacttttctcactctgccagttaatgcctcccaggtctatattgtc
aacagtggacctgtttttactcatttagctgtaatggttgggggtgagtacattgtgtct
gggactggtgccatgtctttgaatatcacccacccctcaccgctagatgaagactacatt
cagtaccgccttcacctcactccagaccatttacccgagacagaagaagtggttctacct
ggacctcttaaacaggagataaccatacaggtctatcgtaaatatggaccagaatatggt
gaaaaaacgaatccaaacatcagctttcagttctatgtgccaagaaacaagagcttggct
gacagcttaccgagaggaaaatggactgctttcacaacaccttgctctgtcacttgtgga
ttgggtatagaaaagcatgagcatgtctgtgtagatgaacacaccaacaaccttttgaag
ccacaccactgtaaagctcctcctccgcctacagcgctgcacacaacctgtcagctccca
tcctgcccccccaggtgggatgcagcaggttttggggcttgcagcgtctcctgtgggggg
ggagttcgggtgcgtcgtgtgcaatgtgttcaaaaacatggatccgatgtggtaaaggtt
ccagattcagagtgtccctcagataaaactccccactctgtggaaaaatgtaaccttcac
cactgccctgccagatggtctgtgtcagaaccaggaaactgttcagcagtgtgtggacca
ggagaagcaaaacgcaacgtgtcatgtatccgacgagaagacggattggatgtcatagtg
gatcataaatattgcttaaatcagatcgcacctccagaatcagtgccctgtgtggtaaac
gtctgccccattgggtgggaatctaagcgagaggatcagcctagtttgaagtctagcttg
atgccacgttccagacaggctgctgtgtacgtctggagtcctgttgtcagccagtgttcc
aggacctgtgggaatggaaccctacaggtgtggttttcttgtgtggatcacgagacggga
cagggggttcctgacttccactgtgacgcttccagcaaacctgatccttactttgagatg
tgtgctgtttatccctgccctccgatgtggcgctctaagcaaggagtgtgcagtgtaacg
tgtggaggaggggtagccaagagagttctgtattgtgctcgagaggcagatggggaggag
gaggtgttggaggattacagctgcagtggctttcccaaaccaacagccgtgattccatgt
aatactcacagctgccctgcaaggtggaaggtattcaagacatggccctgctctgtatcc
tgtgacctgggtgtagctgagaggaatgtgtcttgtgtccaatttatccatggtaaagag
agcgtggtgccagatgatagctgcagggcagccgtcaaacctgccatcacggtgccttgc
ctagtgcaagtgtgcaccttcaagtgggaggtgaagccatggagccagtgctcagcaccc
tgtggatatggtatccagtccagagccgtcttctgcatgggcccctcgaagcccgagccc
ctcagccccctgttttgcatgcacatgcccaaacccatcaccatacagggctgctacaaa
ggcagctgtggagctgtagccttgaacaaaacctccccaattatgagaacaaacctcaca
gaaaagcgtctcccatctcccgttccggtacatgaggatgcccagaacggcgtcagcgtt
gttcctccgattccaacagaggccgtaaccatcccacatactaccacagccattccgacg
acaaagtctggtccatgtggacagctactcctggaggaatcgggcattgtggatttaaag
gatgcgccgagcagatgcacggtgtcgataggtcgaccccttgacgaggtcatcagtatt
aaagtcatatccagttctttggattgcagacaaagggactatgtagcgttttttgatcgc
ctggcctttgtgaggaagtgcgttcaagcagcaggcagtgaactgaccagcagaaccaat
gtcctgtttgttcgccaaaatctgctcacccgtggaaatggggttgtgtttacctataga
tcggagaggagtatgaaaaggagccatcgtcaggattgcgacattcagcttttttccccc
agcggcatttttgagaatccagttacgtcgaacgccagccacacctgccgagtgctcatc
aacgcccctccttcagtgaagatcaggatccaggcgctgcacataggattagtattcaac
accaccaactcccagtctacatacattatgatccgggacatggacgtcctaaagaccact
gtgtttaacggccagcagctgttcctgtggcgctcctctggaaatatggcggaggttgaa
tttcatggtgattacctgtattccaaagggaccttcagagctgaatattcctttgtgcgt
ctttga
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integrated database retrieval system
