Cyprinodon variegatus (sheepshead minnow): 107099712
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Entry
107099712 CDS
T06110
Name
(RefSeq) LOW QUALITY PROTEIN: host cell factor 1-like
KO
K14966
host cell factor 1
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03083
Polycomb repressive complex
cvg04980
Cobalamin transport and metabolism
cvg05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
107099712
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
107099712
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
107099712
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cvg01009
]
107099712
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cvg03036
]
107099712
03029 Mitochondrial biogenesis [BR:
cvg03029
]
107099712
Protein phosphatases and associated proteins [BR:
cvg01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
107099712
Chromosome and associated proteins [BR:
cvg03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
107099712
HMT complexes
COMPASS/SET1 complex
107099712
MLL-HCF complex
107099712
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
107099712
Mitochondrial biogenesis [BR:
cvg03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
107099712
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Kelch_HCF
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_FBX42
Beta-prop_ATRN-LZTR1
Kelch_1
Kelch_2
fn3
Kelch_FKB95
NANM
Motif
Other DBs
NCBI-GeneID:
107099712
NCBI-ProteinID:
XP_015253444
LinkDB
All DBs
Position
Unknown
AA seq
1424 aa
AA seq
DB search
METLNETPTVLQPRWKRVLGWTGPVPRPRHGHRAVSIKELMVVFGGGNEGIVDELHVYNT
ATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNELYELQASRWEWKRLK
AKPPKRGPPPCPRLGHSFSLIGSRCYLFGGLANDSEDPKNNIPRYLNDLYCLELRPGSTV
VSWEIPPTSGPAPPPRESHTAVMTTKGGVSRLIIYGGMNGCRLGDLWVLDLESLVWSQPA
LSGTPPLPRSLHSATVINNKMYVFGGWVPLLGDDIKMGTHEKEWKCTNNLACLNLETMSW
ETVLMDGDEENLPRARAGHCSVAINSRLYIWSGRDGYRKAWNNQVCCKDLWYLETECPVA
PSRVQLVRANTTSLEVSWGPSKTADTYLLQLQRYDIPAGPAPGAAPPSLAPPSQAVPAPG
STPGSPSAADAKGPAVLRLAAAPSAAGGGVRLAAPKTPVTMATLPAGVRVAVPAQPSQAA
IGSGPQMSGMAALAAAAAVTQKIPPSTAPVLGLPAGGGAVKIVSLEPVTMVAXDRSSWVI
ASSLPFQVNNSAARLLKTAAAQVGGASVASAAGTPNRPIITVHKSGSVTVSPQPQVVTTV
VGGVTKTITIVNSPISLGGGGALIGNLGNLGKVVSMVQTRTVQSGAVTGQAGSSPVSQIL
QTKGALPAGTILKLVTSADGKQTAILSTAQAGSTANKPTIIKTIPLSALQGAAGGNSPIT
ILTTKVGTAGTERLISAVPRMSAGVQQGVTQVVLKGAPGMGGTILRTVPMSGLRLVSPAP
GGSSPAVTTLVMKGTSGVASLSTAAGSISTANASLTTPITTLTSLASQVTTATAPTSGPR
QVTLITTPSGAEPQPLVQDLPVSIMASPTSEETGNTTGSTTTTNAEGDAATVTLVCSNPP
CETHETGTTNTATTAGAGGLRQVCSNPPCETHETGTTNTATTATAQQSGETPQGDSTDSA
PSSDPASAVSHSTALTTVTHATPAPGPAVPEISSLVGAERMETSETLIMVPREEEEPTLT
DSQSGGVVSSGASLLQVQMASSDEGLPQQLMSSEGDGGEDVSRTMTLTLTPGLVQDQLAV
TMATGEGASQVALQAAGPVGEANQPSDQPFRIVLTPQELAALVQQQQEAEPEPSSVPTEG
LAPADSLNDPSAESHGHQLPTSAVISAVARLASTFSPTPTMAEGQAKSTAVTTPMETSNG
IREPPIEQRVRTAPKENPWFDVGIMKVTNAVVTHYYVPYDDGAVEDYATSVPDYSQMRRV
ELQPGTAYKFRVAGINICGRGAFSEVSAFKTCLPGFPGAPCAIKISKNLDGAQLTWEPPA
VTAGTITEYSVYLAIQSSQAKSPASGPAQLAFMRVYCGSDPRCLVQASSLANAHIDYTTK
PAVIFRIAARNQKGYGPATQVRWLQETSKDSKAASKRSGPSQDM
NT seq
4275 nt
NT seq
+upstream
nt +downstream
nt
atggagaccctgaatgagacccccactgtgctacagccccgctggaagcgggttctgggc
tggaccgggccggttccgcggccgcggcacggccaccgggccgtgtccattaaggagctc
atggttgtgttcggaggagggaacgagggaatcgtggatgagctacacgtctacaataca
gctaccaaccagtggttcatcccggcggtccgtggcgacatcccgccgggctgcgccgcc
tacggctttgtgtgcgacgggacgcgcctgctggtgttcggagggatggtggagtacggg
aagtacagcaacgagctgtacgagctgcaggccagccgctgggagtggaaacgtctgaag
gccaaacccccaaagagaggcccacccccgtgcccccgcctcggacacagcttctccctg
attggctcccggtgttacctgttcggtggcctggccaatgacagcgaggacccaaaaaac
aacattcccaggtacctgaacgacctttactgtctggagctgagacccggctccacggtg
gtcagctgggagatcccgcccacatctgggccggcgccgccccccagggagagtcacacg
gcagtgatgacgaccaagggcggagtcagcaggctgatcatctacggcgggatgaacggt
tgccggctgggagacctctgggtcctggacttagagtctttggtgtggagccaaccagct
ctcagtgggacgccgcccctcccccgcagcctgcattctgcaaccgtcatcaacaacaag
atgtacgtgttcggaggatgggtccctctgctgggggacgacatcaagatggggacgcat
gagaaggagtggaagtgcaccaacaatctggcctgcctcaacctcgagacgatgagctgg
gagacggttctgatggacggagatgaggagaacctgcccagagctcgggccggtcactgc
agcgtggccatcaactccagactctacatctggagcggccgggacgggtaccggaaggcc
tggaacaaccaggtctgctgcaaagacctgtggtacctggagacagagtgtccagtggcg
ccgtcccgggtgcagctggtccgggccaacaccacgtccctggaggtgagctggggtccg
tctaagaccgcagacacgtacctcctgcagctgcagaggtacgacattccagccggcccc
gcccccggtgccgcccctccttccctggctccacccagccaggccgtcccggcgccgggt
tctactcctggaagcccgtcggcggcagacgccaaaggtccggcggtcctgaggttggca
gcagctccgagtgcggcaggggggggcgtcagactggccgcgccaaaaacccctgtaacc
atggcaacacttcctgctggtgtccgtgtggcggttcctgctcagcccagtcaggcggcg
ataggtagcggccctcagatgagtggcatggcggcgctggcggcggcggcagcagtgact
cagaagatccctccgtccacggcgccggtcctcggcctaccagcagggggcggcgcggtg
aagattgtgagtctggaaccggttaccatggtggcgtgagatcggagctcatgggtgatc
gcctcctcgcttccgtttcaggtgaacaactcggcagcgcgtctcctgaagacggccgcc
gctcaggtgggcggggcttcagtggcgtccgctgcggggactcccaaccggccaatcatc
acggtgcataagtcgggctcggtgacggtctccccacagcctcaggtggtcactacagtg
gtgggcggagtcacaaagaccatcaccattgtcaacagtcccatcagcctgggaggaggc
ggagccttgatcggtaaccttggaaacctggggaaggtggtgtcgatggtccagaccagg
acggtccagagcggagcggttacaggtcaggctgggagcagcccggtctctcagatcctt
cagacgaagggcgctctgccggcgggaaccatcctgaagctggtgacctcagcagatggg
aagcagacggccatcctgagcacggcgcaggccggctccaccgccaacaaacccaccatc
atcaagaccatcccactatcggctctgcagggagcagcaggtgggaacagtccgattacc
atcctgaccaccaaggtgggaaccgcgggaacggagaggttgatcagtgccgtccccagg
atgtctgcgggcgtccagcagggcgtcacacaggtggtgttaaaaggagcgccggggatg
ggcggtaccatcctcagaaccgtccccatgagcggactgagactggtgtctccagcaccc
ggcggaagcagccctgctgtcaccacgctggtcatgaaggggacctcaggggtcgccagt
ctgagcacagccgcaggaagcatctccactgccaacgcctccttgaccacacccatcact
actctgacgtcgctggccagccaggttaccacagcaaccgcccccacctcaggacccaga
caggtgactctgatcacaacgccaagcggtgccgagccccaaccgctggtccaggacctg
cccgtctccatcatggcctctccgacgtcagaggaaacggggaatactacaggaagcacc
acgaccaccaacgctgagggagacgcagccacagtgactctggtctgctccaacccaccg
tgcgagacccacgagaccggaaccaccaacaccgccaccacagctggagctggaggactc
cgacaggtgtgctccaacccaccgtgcgagacccacgagaccggaaccaccaacaccgcc
accacagccacagctcaacagagtggagaaactccgcaaggagactccacagactccgcc
ccctcatctgatcccgcctctgctgtcagtcacagcacagcattaactaccgtaacgcat
gcaacgccggccccgggtccagcagtaccggaaatctcctcattggttggagctgagagg
atggagacctcagagacgctcatcatggtgccacgagaagaggaggagccaacactgaca
gacagccaatcggggggcgtggtgtcatcgggggcgtcgttgttacaggttcagatggcc
tcctcggatgaaggtcttcctcagcaactgatgtcatcagagggggacggaggtgaggat
gtctccaggacgatgacccttacgttgacgccaggactggtccaagatcagctggcagtt
actatggcgaccggcgaaggagcctcgcaggtggcgctgcaagcggctgggcccgtcggt
gaggctaaccaaccgagcgatcagccgttccggatcgttctgacgcctcaggaactggcg
gcgctggtccagcagcagcaggaagcagagccagagcccagcagcgttcccacagagggc
ctcgctccggccgacagcctgaacgacccgagcgcagagagccacggacaccagctgccc
acctcagccgtgatcagcgccgtcgctcgattggccagcacgtttagccccacccccacg
atggcggagggccaggcgaagagcacagctgtcaccacgcccatggagacgtccaatggc
attagggaacctccaattgaacagcgagtcaggacagcgccgaaggagaacccgtggttt
gacgtcggcatcatgaaggtcaccaacgctgtggtaacacattactacgtcccctacgac
gacggcgcggtcgaggattacgcgacttcggtgccagattatagtcagatgaggcgggtg
gagctgcagcctggcactgcctataagttccgggtcgcagggatcaacatctgcggccgc
ggcgccttctccgaggtgtcggcgtttaaaacctgcctccctggattccctggagcgccg
tgcgccattaagataagcaagaacctggacggggcccagctgacctgggagcccccggcc
gtcaccgcgggaaccatcacagagtactcggtgtacctggccatccagtccagccaggcc
aagtcgcctgcttccggcccggcccagctggccttcatgagggtgtactgtggctcggac
ccgcgctgcctggttcaggcatccagcctggccaacgcccacatcgactacaccaccaag
cccgccgtcatcttccgcatcgccgctcggaaccagaagggctacgggccggccacgcag
gtccgatggctacaagaaaccagcaaggactccaaagcagcgtccaagagaagcggacct
tctcaggacatgtag
DBGET
integrated database retrieval system
