Cyprinodon variegatus (sheepshead minnow): 107099814
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Entry
107099814 CDS
T06110
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107099814
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cvg03021
]
107099814
03036 Chromosome and associated proteins [BR:
cvg03036
]
107099814
Transcription machinery [BR:
cvg03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
107099814
Coactivators
SAGA/TFTC/STAGA complex
107099814
Chromosome and associated proteins [BR:
cvg03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
107099814
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
107099814
NCBI-ProteinID:
XP_015253571
Ensembl:
ENSCVAG00000019382
UniProt:
A0A3Q2EG14
LinkDB
All DBs
Position
Unknown
AA seq
910 aa
AA seq
DB search
MAGAPDPLEDMLSTEVDEKAVSDLVGSLESQLGDRKPPAASDPDGKRDVAAVGHLSGKAG
SSEPQQGHQTAGSTREPGASLPLSGQTVSSSAGTIRNTGAGLQAAGAPPLSALPGPVTLS
SQPAASFPRAAVLAPSPAETIRTSSPSLQNLNGSPVAAKVEGSPAPAPPGGSLGSQPGPP
QSPAGSPAVTLQGHPSPVISTAQNGLEPKVSPSLPAAPVLNHSNPLMHTKMLVTSTPAPA
AAQASIIQTQTGSAVKSTVNGVAQPGVAVVRPPGGATSIQPQRAGLITATTRAAAPQTTL
AVRPQQQTTIQLPPGFTMPPGMVLVRTETGQLVLVPQQALAQAQAKLQQGQTVVTQRPTA
PLATPTIRVSTATTAPGAPQTVRLASPAPTRIVQSPTTTSVQPLSVSPAGAVKMAAPQKA
STVITAGVTPAAKQAPVAGAVTPPPAAPPGARVTVVSQEMQENVKKCKNFLSTLIKLASH
NSPSPETSKNVKALVQDLLDAKIEPEEFTSRLQDELKSSPQPYLIPFLKKSLPALRQTLL
NSQQSLTTAPPTTSAPPPVAPGSVTAATIRPRLPVGVTGTTVRMSPPVTNAAVAVGRSAV
QTIQSRSPVVLSQPLRHQATFLRGPSTMAGKPPLQMTAPAHQKKPTDPGGGTFRDDDDIN
DVASMAGVNLNEENARILATSSELVGTKIRSCKDESFLPPGLLHRRILDSAKKLGVTEVP
LDVVNLISHATESRLRSLLEKASVIAQHRTDGAKDEGNMTYEQTSDVRSQLRFFEALERM
EKQRKDEQEREILLKAAKSRARQEDPEQARLKQKAKEMQQQELAQMRQRDANLTALAAIG
PRKKRKLDSGGGASGSSEVTTGSGSSSSASSSRQQLRQRITRVNLRDFILCLEQDRSTAR
SLTLYKALLK
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atggcgggagcccccgacccgctggaggacatgctgtccaccgaggtggacgagaaggcg
gttagcgacctggtgggctccctggagtcccagctgggcgacaggaaaccccccgctgct
tctgatccggacgggaaacgggacgtggcggcggttggccacctctcagggaaagcgggg
tcttcggagcctcaacaagggcaccaaacggcggggtcgacccgggaaccgggcgccagc
ctgcctttatccgggcagaccgtttcttcttccgccgggacaataagaaacaccggggcc
ggtctgcaggcggcgggagccccccctctgagcgcgttacccggaccggtaactctgagc
agccagcccgctgctagcttcccccgggctgcagtcctggctcccagcccggcggagacc
atccggacctcctctcccagcctgcagaacctaaacggcagcccggtagccgcgaaggtg
gagggttcacctgctcccgctccacccggcggctccctgggttcccagcctggaccccct
cagtccccggcgggctcccccgctgtgaccctgcagggccaccccagccctgtgatcagt
accgcccagaacggtttggagccaaaggtttccccctctctgccagcggctccggtcctg
aaccacagcaaccctctgatgcacaccaagatgctggtgaccagcacgcccgctccagct
gcagcccaggcctccatcatccagacccagaccggctctgcggtcaaatcaaccgtcaac
ggggtggctcagcccggggtggcggtggttaggccccctggaggggccacttccatccag
cctcagagagccgggctgataaccgccaccacccgggctgctgctcctcagaccaccctg
gctgtccggcctcagcagcagaccaccatccagctgccccccggcttcaccatgcctcca
ggtatggttctggtccggactgagacgggtcagctggttctggttccccagcaggctctg
gcccaggctcaggccaagctccagcagggtcagacagtggtcacccagagacccacggca
ccgctggcaacacccaccatccgggtcagcaccgccaccacggcacccggggccccccag
acagtccgcctggcttcacccgctccgaccagaatagtccagtctcccaccaccacctct
gtacagcccctctcagtctctcctgccggagctgtgaagatggcggcgcctcagaaggcc
tccacggtgatcacagcgggagtgacgcccgcagccaagcaggcgcccgttgccggcgcc
gtgacgccccctcccgccgcgccgcccggcgccagggtgaccgtggtgtcacaggagatg
caggaaaacgtgaagaagtgcaagaacttcctgtccaccctcatcaagctggcgtcccac
aactccccgtcccccgagacgtccaagaatgtgaaggccctcgttcaggacctgctggac
gcgaagattgaacctgaggagttcacgtctcgtctgcaggatgagctgaagtcctccccg
cagccctacctcatccccttcctcaagaaaagcctccctgctctgcgccagacgctcctc
aacagccagcagtctctgacgacggctccgcccaccacctcagccccgcctccggtcgcc
cccggctccgtcaccgcagccaccatcaggccgcggcttcccgtcggtgtcacgggaacc
acggtccgcatgagcccgcctgtcaccaacgcagccgtggctgtgggcagatccgccgtc
cagaccatccagagccgctctcctgtggtcctcagtcagccgctcagacatcaagccacg
ttcttacgagggccgtccaccatggcggggaaacctcctctccaaatgacagctccggcc
catcagaagaagccaaccgacccagggggcgggaccttcagagatgatgacgacatcaat
gacgtggcgtcgatggcaggggtcaaccttaacgaggaaaacgcccgtatcctagcaaca
agctccgagctggttggaacgaaaattcggtcctgtaaagacgaatccttcctgccacca
ggcctgctgcaccgccgcatcctggactcagccaagaagcttggagtgactgaggtgccg
ctggatgtggtgaacctcatctcacatgccacggagtccagactgcgctctctgctggag
aaagcttctgtgatcgcccagcaccgcacagacggagcgaaggatgaaggaaacatgacc
tacgagcagacgtcggacgttcgctcccagctacggttctttgaggcgctggagcgaatg
gagaaacagcggaaagatgagcaggagcgggagatactgctgaaagctgccaagagtcgg
gcccggcaggaggatccggagcaggctcggctcaagcagaaggctaaagagatgcagcag
caggaactggctcagatgcgacagcgagacgccaacctcacggcccttgccgccatcggg
ccgagaaaaaaacggaagctggactcaggaggcggagcttcaggaagcagtgaggtgaca
acaggatccggttccagctcctctgcttcctcatcccggcagcagctccggcagcggatc
actcgggttaacctcagggacttcatcctgtgtctggagcaggaccgcagcacggctcgc
tccctgacgctctacaaggccctgctgaagtga
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