Cyprinodon variegatus (sheepshead minnow): 107099888
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Entry
107099888 CDS
T06110
Symbol
pou2f1
Name
(RefSeq) POU domain, class 2, transcription factor 1 isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
107099888 (pou2f1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvg03000
]
107099888 (pou2f1)
03021 Transcription machinery [BR:
cvg03021
]
107099888 (pou2f1)
Transcription factors [BR:
cvg03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
107099888 (pou2f1)
Transcription machinery [BR:
cvg03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
107099888 (pou2f1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
POU2F1_C
Pou
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
107099888
NCBI-ProteinID:
XP_015253657
Ensembl:
ENSCVAG00000018375
LinkDB
All DBs
Position
Unknown
AA seq
713 aa
AA seq
DB search
MADGGAASQDEGSAPDAKVNNQSETTKCEMESGDGNTRVQTNGLDFQRQSVPTTISNAHA
QALLQQSKSEDSGALPASVQQSVLPQTQLMLAGGQIAGLTLSPAQQLLLQQAQAHLLAAA
VQQQQQHSASQQNSNTGANISATAVTPITQLPLSQPIQIAPQLPQNLTLPQFVLVQPGHP
IATPLQPAQYIISQTSSGQQGILPAQSLLTQLPQSQANLHSTQPSITLATKPASPTCTTP
STNIKSLPHSQTPPKRLDTPTMEEPSDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLY
GNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAVCAENLSSDQSLSSPSALGSPGMG
IEGINRRRKKRTSIETNIRVALEKSFLEQNQKPTSEEISMIADQLNMEKEVIRVWFCNRR
QKEKRINPPSSVNNGGGSTSIKTIFTPSSPLVASTASLVSSPTINTSATLTVNPMMPLTS
TSVSSLAFTGTTVGATNTASVISTTPVLTTSTSAPSISPSTTTVQSPSIDSKAGIQTLVS
HTPTSIATSLATGQVMLAAPGLTAALPTSASFAAMAAAAGLNPGLMASSQFAPGGALLSL
TPGGLGSTLSPAVMNNNTLATIQALASGGSIPITSLEGGNLLFANTSGSNTPNLVTTPLF
LNPQNLSLLTSNPVSLVSAGTGGLQVTTDAHHQATTAAVPVQASTITTASKAQ
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggaggagcagcgagtcaagatgagggttcagcaccagatgctaaagtgaat
aatcagtcagaaactactaaatgtgaaatggaaagtggtgacgggaacaccagagtccaa
acaaatggactggactttcagcggcagtctgtgccgaccacaatctctaacgcacatgca
caagcgctcctccaacagtctaagtcggaagactctggtgctcttcctgcctccgtccag
cagagcgtattgcctcagacccagctaatgttggcagggggacagattgctggattgacc
ctgagcccagcacagcagctgctgctccagcaggcccaggctcatctgctggctgcagcc
gtgcagcagcagcagcagcattcagccagccagcagaacagcaacactggagccaacatc
tcggccaccgcagtcacaccgattacccagctgcccctgtcacagcccatccagatcgcc
cctcagctaccgcagaatctaaccctgcctcagtttgtcctggttcagcctggccaccca
attgcaacacccttacagcccgctcagtacatcatctcgcagacgtcgtcgggccaacaa
ggcatattgccagcccagagtcttttaactcaactacctcaaagccaagctaacctccat
tcgactcaaccaagcatcacccttgctactaagcctgcttctccaacctgtacaacacca
tctacaaacatcaagagcctgccccacagtcagacaccgcccaagcggttggacaccccc
accatggaggagcccagtgaccttgaggagctggagcagtttgcaaaaacgttcaaacag
cgacgaatcaaactgggtttcacacagggtgatgttggcctagctatggggaagctctat
ggaaatgatttcagccaaacgaccatctctcgcttcgaggccttgaatctgagctttaag
aacatgtgcaaactcaagcctttgctggagaagtggcttaatgatgcagtttgtgcagag
aacctgtcatctgaccaatccttgtccagccccagtgcgctgggttccccgggcatgggc
atagagggcatcaaccgcagacggaagaagaggaccagtattgagaccaacattcgagtg
gccttagaaaagagctttctggagcagaaccaaaaacctacctctgaggagatcagcatg
atcgccgaccagctcaacatggagaaggaggtgatccgggtctggttctgcaatcgccga
cagaaggagaagcggataaacccgcccagcagtgtcaataatggaggaggtagcacctcc
attaaaaccatctttacccctagcagccctttggtggcgagcacagcaagccttgttagc
agtccaactattaacacatccgccaccctgactgtaaacccaatgatgcctctcaccagc
accagtgtctccagtttggctttcacaggcacaacagttggagccacaaacactgcatct
gtcatttccaccacacctgtacttactacatcaaccagcgctccatctataagcccatcc
acgaccactgttcagtccccatccatagacagcaaagccgggatccagacgctggtctcg
cacactccgacgtccatagctacgtctctagcgacaggccaggtgatgctggcagctccg
gggctcaccgcagcgctgcccaccagtgcaagctttgcagccatggctgcagctgcaggc
cttaacccaggactcatggcgtcatcacagttcgctccagggggcgcccttcttagtctg
actcctggtggcctcggcagtacgttgagtccagctgttatgaataacaacactctggct
acaattcaagcattggcatcaggcggctctatccccatcacatccctggaaggcggcaac
ctgctgttcgctaacacctctggctccaacacacccaacctggtgacaacgccgctcttc
cttaacccccagaacctgtcgctgctcaccagcaaccccgtaagcctggtgtcggcgggg
acgggcgggctgcaggtcaccaccgacgcccaccaccaggccaccaccgctgccgtgcct
gtgcaagcctcgaccattaccactgcctccaaggctcagtga
DBGET
integrated database retrieval system
