Cyprinodon variegatus (sheepshead minnow): 107099910
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Entry
107099910 CDS
T06110
Name
(RefSeq) Bloom syndrome protein homolog
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
BLM_N
BDHCT
HRDC
ResIII
Motif
Other DBs
NCBI-GeneID:
107099910
NCBI-ProteinID:
XP_015253700
Ensembl:
ENSCVAG00000017583
LinkDB
All DBs
Position
Unknown
AA seq
1106 aa
AA seq
DB search
MSSLPQNNLKEQLARHSNAAHSKLSLAKPKTGAFSFKKKSSSGTTKVEFPTKVNSLNALA
NRNVNVPKNNLVTKSSLKFSNKLEGNQKNKIDSFFSSSSKCKSDVISPAGCSITKSETPL
ADASIKMPVAPVKPDNSLCDGKGISSTRLDVSSLKIDDWDDFDDFETPAKAKSDSFCSEK
SAVETKITLSSDEEFPEFTGKQSHDAGSLKPELSKKNNDQSSKETEEQESRVNKSTISVE
PSLGHELSDYEVEESPVKRTRRRCLPPLVTSVLSDSDEEICHVSKALKEKTDEKEKWIDP
KKPDLDHTFKPEEDLDYIPPSPPSQTSYTNFGTRNQSGNVQSRDDASQPISPPTAPPKPQ
QLAGDKTKEQLFSIMESICALVDSIPEHELIALSCGDELLLKRAQRKRILACGTDSLSRR
TQQPDSTGISDSFKESFSICGSSTAMSPSSSLPLDTKKSKQPQRSSVISIDHDSDCFDDS
SLKPWQRRDSRTIYVEDDSVCDSPSANSFTKPPVNIEKLSSDANDANLSFPTTLDNVQEK
SKTPTHAATTDFEEDDFYMDDFDIDDFNDSDIPDYFDEPQTKNVTKNLSTPSAAVKEEGA
NKSSWNKKPVTPVAASKPQKIYSPEPNFKNPAHDRFRGFNFPYSQEMMKIFHKRFGLHQF
RFNQLEAINATLQGEDTFVLMPTGGGKSLCYQLPACVSPGVTVVISPLKSLIVDQIQKLT
TLDIPATSLSGDKSDSEAGKIYMQLSRKDPIIKLLYVTPEKVSASNRLISALQNLYERSL
LARFVIDEAHCVSQWGHDFRPDYKKLHELRQKFPKIPMMALTATATPRVQKDILNQLNMS
RPQVYVFISKSETFCLLFLLFLLVNTETLFYICHIQVEFYETESASSIRKHKASASKSVS
KREEMVQECLKELIDLCKQLGKAFGLHYYNIFSTATLKKISERLSSDPEVLLQIDGVTED
KLEKYGAEVIKVLQKYSEWQLTVEEQTENPGDGWIDTRRSEDEGMESSTYFCNQPAQGQK
RKKAPFFKYSKKRKGYGKQSYSSKGRGYSSTESSYSGSRGGSQSAGRGSRNAAGDARGGR
TPGILSAPTPRSNQRPFLKPTYSHMS
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgtctagtctgcctcaaaataatctaaaggaacaactggcaagacacagcaatgctgct
cacagcaaactctccctggctaaacccaaaacaggggctttctcgttcaaaaagaaatct
tcatcaggtacaactaaagtggaattcccgaccaaggtaaacagtctaaatgctttggca
aacaggaacgtgaatgtccctaagaacaatttggtgactaaatcttctttaaaattttca
aacaagcttgaaggaaatcaaaaaaacaaaatcgacagcttcttctcttcaagttcaaaa
tgcaagtcagatgtcatcagcccagcaggttgctccattacaaaaagtgaaacaccctta
gcagatgctagcattaagatgcctgtagctcctgttaaacctgacaactccctctgtgat
ggtaaaggaatcagctcaactagactggatgtatctagtttgaagattgatgactgggat
gattttgatgactttgaaacacccgccaaagccaaaagcgactcattctgctcagagaaa
tcagctgttgaaacaaaaataactttatcttcagatgaagagttcccagagttcacagga
aaacaaagccatgatgctggtagcttaaaaccagaattgagcaagaagaacaatgaccag
tcttctaaggagacagaagagcaagaatctcgtgtcaataaatcaaccatttcagtagaa
cctagtttaggtcatgaactttcagactatgaagtggaggagtctcctgtaaaaaggact
agaaggcgttgtcttcctccacttgtgacttcagtgttgagtgatagtgatgaggaaatc
tgtcacgtctctaaagctttgaaagaaaaaacagatgaaaaggaaaaatggattgatcca
aaaaaaccggacctggatcacaccttcaaacctgaggaagatcttgattacattccccct
tcacctccttctcagacttcttatacaaattttggaacaagaaatcaatctggcaatgtt
cagagcagagatgatgcttcccaacccatcagccctcccacagctccacctaaaccgcaa
caacttgctggtgacaaaacaaaggaacaactctttagtattatggagtccatctgtgct
ctggttgattccatccctgagcatgaactaatcgctttgtcctgtggggatgaacttttg
ctaaagagggcccaaaggaagaggattttagcttgtgggactgattctttgagcaggagg
acgcagcagccagacagtacagggatttctgattctttcaaagaaagcttttccatctgt
ggttcttccactgcaatgtcccctagcagttccctgcctttagacactaaaaagtccaaa
cagcctcaaagatcttcagtcatctctattgaccatgactcggactgctttgacgactcc
agtttaaaaccatggcaaaggagagatagcaggacaatatatgttgaagatgacagtgtt
tgcgactctccatcagcaaacagcttcacaaaaccaccagttaatatagagaaattaagc
tctgacgctaatgatgcaaatctttcattcccaaccacgttagataatgtgcaagaaaaa
tccaaaaccccaacacatgcagccacgacagactttgaggaagatgacttctatatggac
gattttgatatagatgactttaatgattctgacatccctgattactttgatgaacctcaa
actaagaatgtaactaaaaatctaagcactccatctgctgctgtgaaagaagagggagca
aacaagtcgtcttggaacaagaaaccagtaactcctgttgctgcttcaaagcctcagaag
atttattcaccagagcccaactttaaaaatccagctcatgatcgctttagaggctttaac
ttcccctattcacaggagatgatgaagatcttccataaacgatttggactccatcagttc
aggtttaatcagctggaagcaatcaatgctactcttcaaggagaagacacatttgtttta
atgccaacaggtgggggtaaaagtttgtgctaccaattgcctgcatgtgtctcacctgga
gtcactgttgtcatttctccgcttaaatctcttattgttgaccagatccagaagctcacc
acgttagatattccagcaacaagtttatctggtgataaaagtgacagtgaagcgggaaag
atttatatgcagctctccaggaaagacccgatcattaaactgctgtatgtaacgccagaa
aaggttagtgcaagcaacaggttgatctcagctctgcaaaacctgtacgagcgaagcctt
ttagcccgctttgtgattgatgaggcacattgtgtcagtcagtggggccatgattttcgc
ccagactacaagaagttgcacgaactacgtcagaagttccccaaaataccgatgatggct
ctaacagccaccgccaccccccgtgtccaaaaagacattctcaaccagctaaacatgagt
cgacctcaagtgtacgtgttcatttccaagagtgaaacgttttgtcttttgtttttactt
tttctgttggtgaatacagaaacattattctatatttgtcacatccaggtggagttctat
gagacagagagcgcatccagcatcaggaagcacaaagcttctgcctccaagagtgtctcc
aaaagagaggagatggttcaggaatgtctgaaggagctgatcgatctgtgcaagcagctg
ggcaaagcatttggtcttcattattacaacatcttctccactgccaccttaaagaagata
tctgagaggctttcttctgatccagaagtcctcctacaaattgatggtgtgacggaggac
aaactggagaagtatggagctgaggtcattaaggtgcttcagaaatactctgaatggcag
ctcactgtggaagagcagactgaaaatccaggagatggctggatagacaccagacgctca
gaagatgagggtatggagtcctccacctacttctgcaaccagcctgctcagggacagaag
aggaagaaggctccatttttcaagtattctaagaagagaaaaggatatggaaaacaaagc
tactcttctaagggtcgtggatacagctccactgagtcttcgtattccggttccaggggt
ggctcccaaagcgcaggccgagggtctaggaatgctgcaggagatgcacgaggaggcagg
acaccaggaatcctgtcggccccgacgcctcgaagcaaccagcgtccctttttgaaacca
acctattctcacatgagctaa
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integrated database retrieval system
