Cyprinodon variegatus (sheepshead minnow): 107100005
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Entry
107100005 CDS
T06110
Name
(RefSeq) uncharacterized protein LOC107100005
KO
K00698
chitin synthase [EC:
2.4.1.16
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg00520
Amino sugar and nucleotide sugar metabolism
cvg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
107100005
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cvg01003
]
107100005
Enzymes [BR:
cvg01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.16 chitin synthase
107100005
Glycosyltransferases [BR:
cvg01003
]
Polysaccharide
Structural polysaccharide
107100005
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Chitin_synth_2
Glyco_trans_2_3
Glyco_tranf_2_3
Motif
Other DBs
NCBI-GeneID:
107100005
NCBI-ProteinID:
XP_015253837
Ensembl:
ENSCVAG00000012425
LinkDB
All DBs
Position
Unknown
AA seq
1290 aa
AA seq
DB search
MENLERDDSLKRPWDTFREVPIIEDEHTPWRFLKLLKIITLCAVAIAVFGLAVCSKVSFL
LLITLSHEDTKTIPAGQKPVTLLCIGCSVIAPSVLLLLKSVWKACYKSSKVPRKASVALV
LFFELLVSVGLAILTIVAMPHLDIVTNVTILNGVAVLPAFLQAVAQCTAKKINVSLLPSI
LGVLAILTAFCIFLVLYILKDLTDVQTATWVGLAVGGCFFVSFNWWENYFMLICVNSKSK
FLKSLFEDLTRSQNMLHILSSLLRIVVTACVLGAYVPLANMDWDIVTSIPGRETRIVVIT
IGVQLISSALCHWFALAAFKMHAIRRCFIIPLYLASLAVMVFYIVPVIVYFEGYKVSLNT
TENINFTSYCDVAVNGRNLSLIGNLYPELVLDVTQTLCFLNMSEMVDIGLLTGAAFGWWI
GLVMATIHIWFFNVKRIQKTQDLFVRRLYEGAFIEQSLLLNTRFHIQTKQGRKKHYREDA
SPAMLYLCATMWHETYEEILNIMISVFRLDKYRPKIDPTMDDFTFEAHIYFDDAFENVKG
SQIRHLNSYAKDLVQIITEVYGIFKNLDKTFFEVEQEIPHQSIIATPYGARLVFEMPHGN
NIVVHFKDKEKIRNKKRWSMIMYLYYLLGWKLMSKHHSQWKLGCSDDEIKTNIKREKDNT
YLMALDGDTDFQPPSVMLLIDRLKMYPRVGAACGRIHPTGSGPAVWFQKFEYAVSHWLQK
TAEHVFGCVLCSPGCFSLYRAAALLDDNVMKRYSTLSTEPSHYIQYDQGEDRWLCTLLLK
QGWRVEYNAASDAYTNAPTDFKELFNQRRRWGPSTLANIVDLLSSTNLVSKRNPSMSKPF
MFYQLFALISAILAPATIVLMVAGSLSFVFGIPSGAALVIAVIPPAIYLGLCFKLKTDTQ
ITIAAVMSIIYAFLMLLVTMSIIAAMVKEQTILTPSAIFIVAMSIIYIVTALMHPQEFLL
VFYGLLYIICIPSAYLLLTIYSMVNMNCVSWGTREAKPAAGAGTPGTNVQQTQAEKAKKN
MKKCCSWMKCCKKPNEGPEVEQISIRQENLVPEPTPPQPQPQNTIIDDALDNRQEVTAFE
TPVQCWITQLENLSDDIQLHEDILKEDEVQFWEELIEKYLKPLKVDKEKQEKTKKDLAGL
RNKISFSFFFLNALWLVAAFIFQVFEVFVIQIDIVDLNLVETGGKMQIEPLSLMFILGFA
VSVLIQFIGMFCHRVATLIHYVAFLETEPKQQRSAQKQKKLISGANSSSSLASDDDQSSI
KEESEDEMIDDETFFSELDFEEDFQEPQDA
NT seq
3873 nt
NT seq
+upstream
nt +downstream
nt
atggagaacctggaaagagatgattcactcaagaggccatgggacacctttcgagaggtt
cctataattgaagatgagcacacaccttggagattcctaaagcttttaaagatcatcact
ttgtgcgcagtagctatcgctgtctttggactggcagtatgtagcaaggtttctttcctt
ctcctcatcactttatcccatgaagatacaaagactatcccagcaggacagaaacctgtc
acattgttgtgtattggttgctctgttattgcacctagtgttcttctgctcctcaaaagc
gtctggaaagcatgttataaatcatcaaaggtgccgaggaaagcatctgtagccctggtt
ttgttcttcgagcttctagtttctgtggggttggccattcttaccattgttgcaatgcca
cacttggacattgtgaccaatgtgacgattcttaatggtgtggctgtcctccctgcattc
ctgcaagcggtcgctcagtgtactgcaaaaaagataaatgtctccctgcttccctcaatt
ctcggcgtcttggctatactcactgctttctgtattttccttgtcctgtacattctgaaa
gaccttacagatgtgcagacagcaacttgggtgggccttgctgttggtggctgcttcttt
gtgtcttttaactggtgggagaactactttatgctcatctgtgtgaacagcaaatcaaag
ttccttaaaagtctttttgaggacttgaccaggagtcagaacatgctgcacatcctctcc
agcttactcagaattgtggtgactgcctgtgtgcttggtgcttatgtccctctggccaac
atggactgggacattgtgacctccattccaggccgggaaacaagaattgtagtcatcacc
attggagtccagctaatctcctcagcactctgccactggtttgctttggcagccttcaag
atgcacgctatacggagatgcttcatcatacctttgtacctggcttcactggctgtgatg
gtgttctacatcgtccctgtgattgtttactttgagggctataaagtaagcctgaacaca
actgaaaacatcaacttcacaagttactgtgacgtagctgtgaatggaagaaatctaagt
ctgattggtaacctgtacccagagctggttttggacgttacgcaaactctgtgcttcctg
aacatgtcagagatggttgacatcggcttactgacgggtgcagcatttggatggtggatt
ggccttgtgatggccactatccatatatggttctttaacgtcaaacgtatccagaagaca
caagacttgtttgttcggcggctttatgagggagcctttattgaacaatctttactcctc
aacaccagattccacatccagacaaaacaaggaaggaagaaacattatagggaagacgcc
tccccagctatgttgtatctttgcgcaacaatgtggcatgagacctatgaggaaatactg
aatatcatgatctcagttttcagattggacaagtacagaccaaagatagatccaacgatg
gatgatttcacctttgaagcccatatctactttgatgatgcttttgaaaatgtcaaagga
agtcagattcgtcatctaaactcatatgcaaaggaccttgtgcaaatcatcactgaggtt
tatggcattttcaagaaccttgataaaacattctttgaggtggagcaggaaattcctcac
cagtcaatcatagcgacaccatatggagcccgtttggtttttgaaatgcctcatgggaat
aacatagtagttcacttcaaagacaaagagaaaattcggaacaagaaaagatggtctatg
attatgtatctttactatctcttgggttggaagcttatgagcaaacatcacagccaatgg
aagttaggatgcagtgatgatgaaataaagacaaacattaagagggagaaggacaacacc
tacctcatggctttagatggggacacagatttccaaccaccctcagtgatgctgcttatt
gatcgtctgaaaatgtatcctcgtgtcggagcagcatgtggcagaattcaccctaccgga
tcaggtcctgctgtttggttccagaagtttgaatatgctgtcagtcactggctgcagaag
acagcagaacatgtgtttggctgtgtactgtgtagccctggatgcttcagtctatatagg
gcagcggctttgttggatgataatgtgatgaaaagatattcaaccctatccactgagccc
agtcactacatccaatatgaccaaggtgaagaccgttggctgtgcactctgctactgaaa
caagggtggagagtggaatacaatgcagcatctgatgcctacactaatgcaccgacggac
tttaaagaactgttcaaccaacgaagacgatgggggccttccacgttggcgaacattgtg
gatctgctcagttccaccaatcttgtttcaaagaggaacccatccatgtccaaaccgttc
atgttctaccagctgtttgccttgatttcggccatccttgctccagccaccattgttctc
atggttgcaggaagcttgtccttcgtctttggtataccttctggcgctgctctggtcata
gctgtgatacccccagccatctacttgggtctttgctttaaactcaagacagacactcag
atcactattgcagcagtgatgagcatcatatatgcattccttatgttgttggtgaccatg
tccattattgctgcaatggtgaaggaacaaaccattctgacacccagtgccatatttatt
gtggccatgtccatcatttacattgtcactgcattgatgcatcctcaagaattcctttta
gtgttctatggccttctctacatcatctgcatccccagtgcctacctcctgctcaccatc
tactctatggtgaatatgaactgtgtctcttggggcactagagaagcaaaacctgctgca
ggggcaggaacacctggaaccaatgtccaacaaacacaagcagaaaaagccaaaaaaaac
atgaagaagtgctgctcatggatgaaatgctgtaaaaaaccaaacgagggaccagaggtt
gaacagatcagcataagacaggagaatttggtcccagagccgacaccaccacaacctcaa
ccccagaacactattatagatgatgccttggacaataggcaagaggtgacagcttttgaa
actccagttcaatgttggataacccagctagagaacttgtctgatgacattcagctgcat
gaggacattcttaaagaggatgaggtgcagttttgggaagaacttattgaaaagtacttg
aaacctttgaaagttgacaaagaaaaacaggaaaagactaaaaaggacctagcgggccta
agaaacaagatcagcttttcgttcttcttcttaaatgccctgtggttggtggcagccttc
atctttcaggtctttgaggtctttgtcatacagatagatattgttgacctaaacctcgtt
gaaactggagggaaaatgcaaattgaaccactgagtctcatgttcatcctgggctttgct
gtatcagttttgatccagtttattgggatgttttgccaccgagttgccactctcattcat
tatgtggcatttttggaaactgagccaaaacaacagagatctgcacaaaaacagaaaaaa
ttgatatcaggtgcaaattcaagctcaagtttagcctccgacgatgaccagagctccatc
aaagaagaatcagaggatgaaatgatcgacgatgaaacttttttttcagagctggacttt
gaagaagactttcaggagcctcaggatgcttaa
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