Cyprinodon variegatus (sheepshead minnow): 107100056
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Entry
107100056 CDS
T06110
Name
(RefSeq) ras and Rab interactor 3-like
KO
K23687
Ras and Rab interactor 2/3
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvg04131
]
107100056
Membrane trafficking [BR:
cvg04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
107100056
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS9
RIN1
SH2
Motif
Other DBs
NCBI-GeneID:
107100056
NCBI-ProteinID:
XP_015253897
Ensembl:
ENSCVAG00000010851
UniProt:
A0A3Q2E372
LinkDB
All DBs
Position
Unknown
AA seq
787 aa
AA seq
DB search
MAVHASVNGTTAIPWRGSRKKLSLLEKLRSCQDAWCPGAPWDRDRAHAAISGAPAGSFLV
VRDSVTSQPCLLCVSAGDQNGEVLDYNMNCTGTAFQVSASRLSFSELPQLVLFYSLSRDV
LAVCLSIPSLIYSKSEMNKDHLSQLEPNTWLSPPPEYQTEEVPQKEPSHVMCSIQLTSSN
GALCIINPLYIHEHGDEWLTHKPAGLQLSHIRRERRLSTTRTWAGAGIQSKRATSLDQES
KYSNTEAAGLTRARSADSPLTPQTPTEVVLRRPSRDLTCSIHQRASTGSLSTPTTPGTPE
QHRHSSPVPQSPHRVSWIEDGVWLPPPRPSSLLQPPSLELDSLSISSIEEEQETQIASPT
PHHPSAHRLADKVMHRLSAVGQALGGLVSQKKRLTNRVVELSERKGTAFGETVKSFVEVT
LKGGSDPSGPMGAEFLQEVRSSLSSLREILLDYPDIQAILDSITDLNDPEIDSLVEITLH
KVALKPVSSHLYSCIHTARTNDGSFQRLQGNFLVLEKNGVEELGGSKGVGVPDPLTLDRI
QQRWASMHEAYSPNKKIQILLKVCKSIYHSMSANATSSTGTVFGADDFLPCLTWVLLRSN
LISLQVDTDYMMELLDPTQLQGEGGYYLTTLYASLFYINSFQPRLAARQLSVEAQHSINQ
WHRRRTLHCNKSRRSVQRRTIRRQMAKQNLETETKSKSKSGTENESEEAGVTGQSTETST
EADFMPSENTECEQELEDQPQTSVQTDFQAAKQQEMMTSEQEDRLSVCTETEETKDDSDE
ELKGDLR
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgcatgcttctgttaatgggacaacagccatcccatggaggggcagcagaaag
aaactttcactgctggagaaactcaggagctgtcaggatgcctggtgtcctggggccccc
tgggaccgggatcgggcccatgctgctatcagcggagcaccagctgggagtttcctggtc
gtacgggactctgtgacgtctcagccctgcctactttgtgtttctgcaggggatcagaat
ggagaagttctggattataacatgaactgcaccgggacagccttccaggtctctgcgtct
cgtctgtctttctcagagttgcctcagctggtgcttttctactctctgtccagggatgtt
ttggctgtctgcctgtccattcccagtttgatctacagcaaaagtgagatgaacaaagat
catctctcccagcttgaacctaatacttggttgtccccaccacctgagtatcagacagaa
gaagtgccccaaaaggagccaagccacgtgatgtgctccatacagctgacttcctccaat
ggagccttgtgtatcataaatcccctctacattcatgaacatggagacgagtggttgact
cacaagccggcgggtttacagctgtcacacatccggcgagaacgacgcctaagcaccact
cggacctgggcaggggccgggatacaaagcaaacgagccacctcattggaccaggaatcc
aaatattccaacacagaggctgctggtctgaccagagccaggtccgctgattccccactc
accccacaaacaccaaccgaagtggtcctcaggaggccgagccgggatttgacatgcagc
atccatcagagagcaagcacggggagcctttccactcccaccacaccagggacgcctgag
cagcaccgtcacagtagtcctgtacctcagtcacctcacagggtctcatggattgaagat
ggagtttggttgcctccacccaggccttcttctctgctccagccgccatccctagagctt
gattcactgtcgattagcagcatagaggaagagcaggagacccaaatagctagcccaaca
ccccaccacccttcagcacaccgtctggctgataaggtcatgcaccgtctgtcagctgtg
ggccaggcactcggtggactggtgtcccagaagaaaaggctgaccaacagagtggtagag
ctgagcgagaggaaaggaactgcttttggagagacggtgaaatcatttgtagaggtgact
cttaagggtggttctgatcccagtgggccgatgggagcagagttcctacaggaagtgagg
tcatcactttcatcgctcagggagatcctgttggactatccagacattcaggcaatactg
gatagtattacggacttaaatgaccctgaaattgactccctggtggagatcaccctccac
aaagtggccttgaaacccgtctcctcccatctctattcttgcattcacaccgcccggacc
aacgacggcagcttccaacgccttcaaggaaacttcctggtgttagaaaagaacggggtc
gaagaacttggtggatcgaaaggagtaggagtccctgatcctctcacattagacagaata
caacagagatgggcaagtatgcacgaagcatactctccaaacaagaagatccagattctt
ctcaaagtctgcaagagcatttaccatagcatgagcgctaatgccacttctagcacaggt
acagtgtttggagcagatgacttcttaccgtgtttgacctgggttttgctccgtagcaac
ctgatcagcttacaggtggacactgactacatgatggagctgctggacccaacacagcta
cagggagaaggtggttactaccttacaactctatacgcctctctcttctacatcaacagc
ttccagccaaggttggctgcccgtcagctcagtgtagaggcccaacactctattaatcaa
tggcatcgtaggcgcacgctccactgcaacaagtcgcgtcgcagcgtgcaaagacggacg
attcgcaggcagatggccaagcagaacctagagacagaaactaagagcaagagtaaaagt
gggacagaaaatgagtctgaagaagctggtgttacagggcagagcacagaaactagcaca
gaggctgactttatgccaagtgagaacacagagtgtgaacaggaactggaagaccagcca
cagacctctgtgcaaactgactttcaagctgcaaaacagcaagagatgatgaccagcgaa
caggaagacaggctgagcgtttgtactgaaacagaagaaactaaagatgattctgatgaa
gagctaaaaggagacctgaggtga
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