Cyprinodon variegatus (sheepshead minnow): 107100073
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Entry
107100073 CDS
T06110
Symbol
sin3a
Name
(RefSeq) paired amphipathic helix protein Sin3a
KO
K11644
paired amphipathic helix protein Sin3a
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
107100073 (sin3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cvg03036
]
107100073 (sin3a)
Chromosome and associated proteins [BR:
cvg03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
107100073 (sin3a)
REST complex
107100073 (sin3a)
Heterochromatin formation proteins
Other heterochromatin formation proteins
107100073 (sin3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
Motif
Other DBs
NCBI-GeneID:
107100073
NCBI-ProteinID:
XP_015253914
Ensembl:
ENSCVAG00000010628
UniProt:
A0A3Q2CSY8
LinkDB
All DBs
Position
Unknown
AA seq
1279 aa
AA seq
DB search
MKRRLEDQDTVLASQQRRLTSNPEPFQHRILAPATAAPAVYEAVTDNMQPTAGVQYSVPQ
GYQVPTVAQNSGGHGHVSGPTVHSGPLHHSSAVQSHGPSVMSGHGHTTAPPSSAQGHQQF
QRLKVEDALSYLDQVKLQFGNQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDL
IMGFNTFLPPGYKIEVQTNDLVNVTTPGQIHHITPHGISVQNIPITGAPAQHLPQLPSAA
ATTAPPHLTQPTPAKLSKPPQLQVLTQSGQTNPSIPAYASPRSPPLQLHPPLCGTPAGPP
MQNNQPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTE
QEVYAQVARLFKNQEDLLSEFGQFLPDANSSAMLSKTNAEKAESVKNDHGLTTKKMQLNN
KQRPNQNGCQIRRHPTPGSTPPIKKKPKLLNLKDSPTADPSKHGGGMESMFFEKVRKALR
SAEAYDNFLRCLVIFNQEVISRAELVQLVLPFLGKFPELFNWFKNFLGYREMSHMETYPK
ERATEGIAMEIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDS
TFVSSKKTQYEEHIYRCEDERFELDVVLETNLATIRVLETVQRKLSRMSAEEQAKFRLDN
ALGGSSEVIHRKAIQRIYGDKAPDILDGLKKNPAVSVPIVLKRLKMKEEEWREAQRGFNK
IWREQNEKYYLKSLDHQGINFKQNDTKVIRSKSLLNEIESIYDERQEQASEENTAAPMGP
HLTLAYEDSQILEDAAALIIHHVKRQTSIHKEDKYKIKQIIYHFIPDMLFAQRGELSDLE
EEEEEEDVGLEEGASKKSNGVPGTGSPTKSKLLFCNTAAQKLRSCEDAYNLFFVNNNWYI
FLRLHQTLCSRLLRLYEQAERQMEEDVRERDWEREVLGLKKEKNDNPAIQLRLKEPMDIE
VEDYYSAFLEMVRNLLDGNMEASQYEDSLREMFTIHAYIAFTMDKLIQSIVRQLQHLVSD
EICVQVTDLYLTETGNGATWGATTAQSSKNSAEVIYQRKAEQLMSEENCFKVMFVKNRGQ
VQLTVELLDTEEENSDEPMEAERWSDYVGRYLNPDSTTPELREHLAQKPVFLPRNLRRIR
KYQKGREQMDKEACEGGKKSMEKEKMECMFKLNSYKMVYVFKSEDYMYRRTALMRAHQSH
ERVSTRLHKRFQAWVDAWVKEHVNREMSAETAKWLMGEGRDGLLPCTTTCHPEVLHFRNI
NKYRVEYAVADRDAGREEK
NT seq
3840 nt
NT seq
+upstream
nt +downstream
nt
atgaagcggcgtctggaggatcaagacacagtgcttgcatcgcagcagcggcggctcacc
agcaacccagagccttttcagcatcgtatcctggcccccgccaccgctgctccggctgtg
tatgaagccgtgaccgacaacatgcagcccactgctggtgtccaatactcagtcccccag
gggtaccaggtacccaccgtggcccagaacagtggcggacacgggcatgtttctggtccg
acagtccactctgggccccttcatcacagctccgccgttcagtcccacgggccctctgtg
atgtcagggcatggtcacacaacggcccctccatcctccgcacagggtcaccagcagttt
cagagactaaaggtggaagatgctttatcgtacttggatcaagtgaagctacagtttggg
aaccagcctcaggtctacaacgactttttagatataatgaaagaattcaagtctcaaagc
atcgatactccgggggtcataagcagggtgtcgcagcttttcaaaggtcacccagacctc
attatgggtttcaacacttttctcccccccggctacaagatcgaggttcagaccaatgac
ctggtcaatgtgacaacgccgggtcagatccaccacatcaccccacacggcatttcagtc
cagaacatccccataacgggagcgcccgcccagcatcttccccagctgccatccgctgct
gccaccaccgctccgcctcacctgacgcagccaacccccgccaagttgagtaagcctccg
cagctgcaggtgctgacacagagtggccagaccaacccatccatccccgcctacgcctca
ccccgatctccaccccttcagcttcacccgcccctctgcggtacccctgctggcccaccc
atgcagaacaatcagccggtggagttcaaccatgccatcaactacgtcaacaagatcaag
aaccgcttccagggccagccagacatctacaaagcctttctggagattctccacacatac
cagaaggagcagcgtaacgctaaagaggctggagggaactatacgccggctctgacggag
caggaggtctacgctcaagtggcaagactcttcaagaaccaagaggacctgctgtcagag
ttcggacagtttctccctgatgccaacagttcagctatgctgagtaagaccaatgcagaa
aaggcagaatctgtgaagaacgaccacggcctcaccaccaaaaagatgcagctcaacaac
aagcagagacccaatcagaatggctgtcagatccggcgccaccccactccagggtcaaca
ccacccatcaagaagaagccaaagttactgaatctgaaggactctccaacggcagacccc
agcaagcatggaggcggcatggagtctatgttctttgagaaggtgcggaaagctctaagg
agcgctgaggcttacgacaacttcctgcgctgcctggtcatctttaaccaggaggtgatc
tccagggctgagctggtgcagctggtgctgccgtttttggggaaatttcccgagctattc
aactggttcaaaaacttcctgggctatcgtgaaatgtcgcacatggagacatacccaaaa
gaacgggccacggagggcatcgccatggagattgactatgcttcctgcaagaggctgggc
tccagctatagagctctgcctaaaagttaccagcagcccaaatgcaccggcagaacgccg
ctttgtaaagaggtcctgaacgacacctgggtctcctttccctcgtggtccgaggactcc
actttcgtcagctccaagaagacgcagtatgaggagcacatctacaggtgtgaggacgaa
cgcttcgagcttgatgtggtgttggagaccaacctggccaccatcagagtgctggagacg
gtgcagcggaagctgtcccgcatgtccgcggaggagcaggctaagtttcggctggacaac
gcactgggcggttcctctgaggtgattcaccgcaaggcgatccagaggatatatggagac
aaagctcctgacatcctggacggcctgaagaagaaccccgctgtttctgttcccattgtg
ctgaaaaggttaaagatgaaggaggaggaatggcgggaagcccagcgaggctttaacaag
atctggagggagcagaacgagaagtattacctcaaatccctggaccatcaaggcatcaac
ttcaaacaaaatgacaccaaagtgattcgatcaaagtctttgctgaatgaaattgaaagc
atctatgatgagaggcaggagcaggcgtcggaggagaacaccgccgctcctatggggccc
cacctcactttagcttacgaggacagccagatcctggaggacgcggcggcgctcatcatc
caccatgtgaagcggcagaccagcattcataaggaggacaagtacaagatcaagcagatc
atctaccacttcatccctgacatgctgttcgcacagcgcggcgagctgtcggacttggag
gaggaggaggaagaagaagatgtggggctggaggagggggcttccaaaaaatccaacggg
gtcccaggcaccgggagccccaccaagtccaagctgctgttctgcaacacagcggctcag
aagctgcgctcctgcgaagatgcctacaacctcttcttcgtcaacaacaactggtacatc
ttcctgcgcctccaccagacgctgtgctcgcggctgctcaggctgtatgagcaggcggag
cggcagatggaggaggacgtcagggagcgggactgggagagggaggttctggggctgaag
aaggagaagaacgataatcctgccatccagctcagactcaaggagcccatggacatcgag
gtggaggattactattcagccttcctggagatggttcggaacttgctggacggaaacatg
gaagcctctcagtacgaagactctctgagggagatgttcaccatccacgcttacatcgca
ttcaccatggacaagctgatccagagcatagttcggcagctgcagcacctagtgagcgac
gaaatctgcgtccaggtaacagacctctatcttacggagactgggaacggagccacgtgg
ggggccacaactgcacagtcgtcaaaaaactcggctgaggtgatctaccagagaaaagca
gagcagctcatgtctgaagagaactgcttcaaggtgatgtttgtgaaaaatagagggcaa
gtgcagctcacggtggagctgctggacacggaggaagagaattctgacgagcccatggag
gccgagcgttggtccgactacgttggacgctacctcaacccagattccaccacccctgag
ctgagggagcatctggcccagaagcctgtgtttcttccacggaacctgaggcggatcagg
aagtaccagaagggccgggagcagatggacaaggaggcctgtgagggggggaagaaatcc
atggagaaggaaaagatggagtgcatgttcaaactcaactcctacaaaatggtctacgtc
tttaagtctgaggactacatgtaccgccgcaccgccctgatgagggctcaccagtcgcat
gagagggtgagcaccaggctgcacaagcgcttccaggcctgggtggacgcctgggtcaaa
gagcacgtcaaccgcgaaatgagtgcagagaccgccaagtggctgatgggggaagggcgt
gacggcctgctgccctgcaccacaacgtgccacccagaagtcctccacttcaggaacatc
aacaagtatcgcgtggaatacgccgtagctgacagagatgcggggagggaagaaaagtag
DBGET
integrated database retrieval system
