Cyprinodon variegatus (sheepshead minnow): 107100090
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Entry
107100090 CDS
T06110
Name
(RefSeq) U3 small nucleolar RNA-associated protein 14 homolog A-like
KO
K14567
U3 small nucleolar RNA-associated protein 14
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
107100090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cvg03009
]
107100090
Ribosome biogenesis [BR:
cvg03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
107100090
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Utp14
Motif
Other DBs
NCBI-GeneID:
107100090
NCBI-ProteinID:
XP_015253942
LinkDB
All DBs
Position
Unknown
AA seq
736 aa
AA seq
DB search
MASVSRKNRNKNTLKRSCGVAASVEDKEAEEGMDGAEEEVTSSEEDEGQDERKRQKLLEA
ISALGGKRKKTLGERSEAAVHMSEFSVNTEGGPGKVELADLIGSLEKTSAVPNKRKKELK
KMQHINKTLDSPLSKQETERIQRDMAFQKAASEVSRWDSIIIQNNKAEQLVFPLSQEPAG
PKPVETLVAGWKAKTPLEQEVFALLSANKQPLTDPVLTPAEKASVKAMSLEEAKIRRAEL
QKARILQSYYEAKARRERKIKSKKYHKVQNKAKRKEFLKNFDQMVKTDPAAALQELNKME
LARMQERMSLKHQNSSKWAKSKAIMAKYDDEARKAMQQQLEMNRELTQKLVVPLNEEEEE
EGRECDAEVLPDFVNDAVDMRDALNPWMKGKLTEEPTQEKLKITETEEREVVAAEEEEEE
QEAEETEEEALLREFDRRRNLQERAATEDSAASDSDENDPAEITTPPRRMENNSKDTQGV
PSADINDESAQLEEGLERIRTVEDLELLHHEPSAEEKHPGTTKAPPSEGKSVGKLKKKKK
KKGIELKEVLTKETNMIKVPLTPTITDSENSEAKLDQRGLIKEAFAGDDVISDFLKDKRR
QEDEGKPKVIDLTLPGWGHWGGVGLKLPTRKRRRFRFKGAPPPPRKDQHLPSVIISEKKS
ASISLHQVHSLPFPFENSTQFESCIRSPLGRTWNTERTVKKVTKPRVVTHLGTIIEPIAE
EELQKANKNVVSKEKS
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtgtctctaggaaaaaccggaataaaaatacgttaaagaggagctgtggtgtt
gctgccagcgtggaggataaggaagcagaggagggtatggatggagctgaggaagaggtc
accagtagtgaggaggacgagggccaagatgaacgaaaacggcaaaaacttctggaggcg
atcagcgctttgggtggaaagaggaagaaaacgctgggagagaggtctgaggcggctgta
cacatgtctgagttctccgtaaacaccgagggggggcccggtaaggtggagctggccgat
ctgatcgggagcctagagaagacctccgctgttccaaataaaaggaagaaagagttgaag
aaaatgcagcacattaataaaaccctcgactctcctcttagtaagcaggagaccgagaga
atccagagggatatggctttccagaaggcagcatcagaggtgagccgctgggacagcatc
atcattcagaacaacaaggccgagcagctggtcttccctctcagtcaggagccggctggc
cccaaaccagtagagacactggtagctggatggaaggctaagactccactggagcaggaa
gtctttgccctgttgtctgctaacaaacagcccctgactgacccggtcctgacccctgca
gaaaaggcttcagtaaaggccatgagtctggaggaagccaagatccgtcgtgcagagctg
caaaaagctcggatccttcagtcctactatgaggccaaggctcggagagagagaaaaatc
aaaagcaagaagtatcacaaagtgcagaacaaggccaaacgcaaagagttcctgaagaac
tttgaccagatggtgaaaactgacccagcagctgccctgcaggagctcaacaagatggag
ctagccaggatgcaggagaggatgtctttaaagcatcagaacagcagcaaatgggccaaa
tcaaaggccatcatggccaaatacgacgatgaggctcgcaaagccatgcagcagcagctg
gaaatgaacagagagctcactcagaagctggtggtgccattgaatgaggaggaggaggag
gaggggagagaatgtgatgcagaagttctccctgactttgttaatgatgcagtagacatg
cgagatgcattaaatccctggatgaaaggaaaactaactgaagagccaacacaggagaaa
cttaaaattacagagacagaggaaagagaggtagtagctgctgaggaagaagaagaggag
caggaagctgaggaaacggaggaggaggccctcctcagagagtttgaccgcaggaggaac
ctgcaggagagggctgcaacagaagattcagcagcttctgacagcgatgaaaatgacccc
gcagagataacaaccccccccagaagaatggagaacaactccaaagacactcaaggagtc
ccctctgctgacatcaatgatgagtcagctcagctggaggaggggctggagaggatcaga
actgtggaggacctggaacttctccatcatgaaccatcagctgaggaaaagcatcccggc
accaccaaagccccaccctcggaagggaaatcagtaggcaaactaaagaagaagaagaag
aagaaagggattgagctaaaagaagttcttactaaggaaacaaatatgatcaaagttcca
ctcactccaacgatcacagactcagagaattcagaagctaagcttgaccaaaggggactg
attaaggaagcttttgctggagatgatgttatctcagactttcttaaagataaaaggagg
caggaggacgaagggaagccaaaggtgatagacctgaccttgcctggctgggggcattgg
ggaggtgtgggtcttaaactaccaacaagaaagcgcagaaggtttaggttcaagggtgct
cctcctccacctaggaaggaccagcatcttcccagtgtcatcatttctgagaagaagagt
gcctccatcagcctgcaccaggttcattccctgcccttcccctttgagaactccacacag
tttgaaagctgtatccgctcaccgctgggccgtacgtggaacacggagcgaaccgtgaaa
aaagtcaccaaacccagggtggtgacccatcttggtaccatcattgaacccatagctgaa
gaggaactgcagaaagccaacaagaatgtggtgtctaaagaaaaaagctag
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