KEGG   Cyprinodon variegatus (sheepshead minnow): 107100154
Entry
107100154         CDS       T06110                                 
Symbol
snrpd3
Name
(RefSeq) small nuclear ribonucleoprotein Sm D3
  KO
K11088  small nuclear ribonucleoprotein D3
Organism
cvg  Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cvg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107100154 (snrpd3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cvg03019]
    107100154 (snrpd3)
   03041 Spliceosome [BR:cvg03041]
    107100154 (snrpd3)
   03032 DNA replication proteins [BR:cvg03032]
    107100154 (snrpd3)
Messenger RNA biogenesis [BR:cvg03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     107100154 (snrpd3)
Spliceosome [BR:cvg03041]
 Complex A
  U1 snRNP components
   Sm proteins
    107100154 (snrpd3)
  U2 snRNP components
    107100154 (snrpd3)
 Complex B
  U1 snRNP components
    107100154 (snrpd3)
  U4/U6.U5 tri-snRNP components
    107100154 (snrpd3)
 Complex C
  U2 snRNP components
    107100154 (snrpd3)
DNA replication proteins [BR:cvg03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     107100154 (snrpd3)
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 107100154
NCBI-ProteinID: XP_015254032
Ensembl: ENSCVAG00000001276
UniProt: A0A3Q2C6V9
LinkDB
Position
Unknown
AA seq 127 aa
MSIGVPIKVLHEAEGHIVTCETTTGEVYRGKLIEAEDNMNCQMSNITVTYRDGRVAQLEQ
VYIRGSKIRFLILPDMLKNAPMLKSMKNKNQGSGAGRGKAAILKAQVAARGRGRGGIGRG
NIFQKRR
NT seq 384 nt   +upstreamnt  +downstreamnt
atgtccattggggtaccaatcaaggtcctgcatgaggcagagggacacattgtgacctgt
gagaccaccacaggcgaggtttacagaggcaagctgattgaagctgaagacaacatgaac
tgccagatgtcaaatattacggtgacctatcgcgatggacgggttgcgcaattggagcag
gtctacatccgaggaagcaagatccgttttctgatcttgcctgatatgttaaagaatgct
cccatgttgaagagtatgaagaacaagaaccagggatctggtgcaggaagaggcaaggcg
gccattctaaaagcacaagtggctgcaagagggcgaggtcgtggtggaattggaagagga
aacatcttccaaaagaggcgataa

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