Cyprinodon variegatus (sheepshead minnow): 107100211
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Entry
107100211 CDS
T06110
Name
(RefSeq) toll-like receptor 13
KO
K18808
toll-like receptor 13
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cvg04054
]
107100211
Pattern recognition receptors [BR:
cvg04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
107100211
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
TIR
TIR_2
LRR_1
LRR_9
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
107100211
NCBI-ProteinID:
XP_015254106
Ensembl:
ENSCVAG00000007722
LinkDB
All DBs
Position
Unknown
AA seq
978 aa
AA seq
DB search
MATLFYQVTLFGFILCAIQQICSYSFNSCIGDPYSNMTSFHCYNQKQKNMSGILDDLPGS
AVNLTASFNVIETILNNSFAHLPNLEFLSLAQNNLTSIDPLAFQKLYHLKYLNMSFNNLS
ELSPLLFEDLHNLTSLSLANNNLTMLPGEIFSNVANLEILNMRNNHLTNFSMLIKSVAAL
TNLKFLDLCLNKLTSLSDLNTSLPQSLKVLHLCRNNLHTLGCRPSLFRFINLLDFSFNSK
LPSIALQGVDLSNVKRLLLQSTSVKAVEFLNISNINAGHVAFSGMGLKNNTLLMDLCIFL
RRKLKWIKNVDLRHNCIKNINNNTLSICPKIIGTLDLSNNELKKVNCLEFLNNQTNISKF
NAEHNHLTLLPSCIRKNGTYFNSLKELSYRYNRIRSINRYAFSHMPNIETLKLNINNLAF
LDRKALKGLKRLKTLRLDNNLLTDLFKETFSDNYNLQILNLRNNRISVIFNGTFMNLGKL
ITLDLGGNKIAHFQQSGLEGLKSLSKFYLDGNYLKQIDSSYYRAFQDTLTVLDLQKNLIN
YHSEVTISPFEKLRKLRNLKLDNQRNHGLVLLPKSFFKGLHSLKSLYLTNNHISTLKPEV
FDDLKSLEFLTLDNCCVGVAKLRPGVFKNLRNLTRLVVENMGIQNFSKEVFGNLTHLRIL
QLNRNVMQSISVDALESLPLLQYLDIRDVPLSCACKNSLLQNYTVKNPNVQVIYLYAMPC
QENKTIKFHNFDTRVCYIDLGKYMFFSTAAVLFVFAVSPLLYVKLYWKMKYSYYVFRSWF
GDQWNRLREKEEKCKYDAFISYNFSDEEWVMKQLLPNLEGNGSSFKLCLHHRDFELGRNI
VDNIVTAVYSSRKTICVVSNNFLRSEWCSLEIQLASYRLFDEHRDVLLLVFLEPISDRQM
SSYHRMRKVMLKKTYLQWPGSDCTNPSQAQELFWNQLRRAIRTGSALETEHNETDEDFPP
TNNKKEKLLSDENNLCLP
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atggccactctgttttatcaagtaacactgtttggattcatcctttgtgctattcagcaa
atctgcagctacagctttaatagctgcattggagatccatattcaaacatgacaagtttc
cactgctacaatcaaaaacaaaagaacatgtctggcatattagacgacctccctggatct
gctgtcaaccttacagcgtctttcaacgttattgagaccattctcaacaacagctttgct
catttaccaaacttagagttcctcagtttagctcagaacaatctgacatcgattgatcct
ttggcctttcagaagctatatcaccttaagtatctaaatatgtcctttaacaatttatca
gagctcagccctttattgtttgaggacctgcataacctcacctccctctccctggcaaac
aacaatttaacaatgttgcctggagagattttctccaacgttgctaatctagaaatatta
aatatgaggaacaaccatctcacaaatttttccatgttaataaagtctgtagcagctctt
acaaatttaaagttcttagacctttgcttaaacaaactgacttcacttagtgatttaaat
acatcgctaccacagtcgttaaaggtgttacacttatgcagaaacaatctgcacactttg
ggatgtagaccatcactattcaggttcatcaatcttcttgacttctcattcaattctaaa
ctaccttcaatagctttacaaggagtggatctaagcaatgttaagaggctgctattgcag
tcaacaagtgtcaaggcggtggagtttttaaacatcagcaacatcaatgcaggtcatgtt
gcattctcagggatgggtcttaagaataacacccttcttatggatttatgcatttttcta
agaagaaagctaaaatggataaaaaatgtagatttacgacataattgcatcaagaatata
aataataataccttatcaatctgccctaaaatcattggaaccttagatttatccaataat
gagcttaaaaaagtaaactgcctggagtttttaaacaatcaaaccaatattagtaagttt
aatgcagagcataaccatcttactttactaccaagttgtataaggaaaaatgggacttat
tttaatagtttaaaagaattgagctaccgttacaatcgaatccgttcaatcaatagatat
gctttcagtcacatgccaaatattgagacgttgaagctcaacataaataatttagctttt
ctcgatcgcaaagccctaaaaggtctaaaaagacttaagaccctgcggctagacaataat
ctcctcactgatttatttaaagaaacatttagcgataattacaacctgcaaatcctcaat
ctacgcaacaatcgcatttctgtcatatttaatggaacctttatgaacctaggaaaatta
ataactttggacttaggaggtaataagatcgcccattttcagcaatcaggccttgagggc
ttaaaaagtctctcaaaattctacctagatggaaactacctcaaacagattgactcttca
tactacagagcttttcaagacactcttacagtgctggatttacaaaaaaatctgattaat
taccactcagaggttacaatttcaccatttgaaaaactcagaaaactcaggaatctgaaa
cttgacaatcagagaaatcatggcttagtacttttacccaaaagctttttcaaaggactc
cactcgctaaaatcgctgtaccttaccaacaaccacatatctactcttaagcctgaagtt
tttgatgatctgaaaagtttagagttcctcacgctagataactgctgcgtcggagtggcc
aagttacgaccaggcgtcttcaagaatcttagaaatttgaccagattggttgtagaaaat
atgggaattcagaacttctccaaagaggtttttgggaatcttacacacttacgcattctt
cagctaaatcgaaatgtgatgcagagcatttctgtagatgctcttgagagcttgccttta
ctccagtatcttgacatacgtgatgtcccccttagctgtgcctgcaaaaacagtcttctg
caaaattatacagtgaaaaaccctaatgttcaggtcatctatctgtacgcaatgccctgc
caagagaataaaacaatcaaatttcataattttgacaccagagtttgctacatagattta
ggaaagtatatgtttttcagtactgcagctgtgctatttgtgtttgcagtctctccttta
ctttatgtcaaattatactggaaaatgaagtacagctattatgtgttccgttcctggttt
ggtgatcaatggaatagactcagagagaaggaggaaaaatgcaaatatgatgcttttatt
tcctataatttctctgatgaggagtgggtcatgaagcagttgctgcccaacttggaggga
aatggatcgtcctttaagctctgcctgcatcacagggactttgagttgggtcgtaacatt
gtggacaacatcgtcactgcagtgtacagcagcaggaaaactatctgtgtggtaagcaat
aactttctacggagtgaatggtgctcattggaaatccaactggcaagttacaggctgttt
gatgagcacagggacgttctactgctcgtgtttctggagccgatctctgacagacagatg
tcatcctatcaccgcatgaggaaagttatgttaaaaaagacctatcttcaatggcctggc
tctgactgcacaaatccttcacaggcccaagagctgttctggaatcagcttcgcagggca
atcagaacaggcagtgcactggaaacagaacacaatgagacagacgaagactttcctccc
accaacaacaaaaaagaaaaactcttgtcagatgaaaacaatctttgtttaccttaa
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