Cyprinodon variegatus (sheepshead minnow): 107100417
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Entry
107100417 CDS
T06110
Name
(RefSeq) UV-stimulated scaffold protein A-like
KO
K23720
UV-stimulated scaffold protein A
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
107100417
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cvg03400
]
107100417
DNA repair and recombination proteins [BR:
cvg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
107100417
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF2043
Motif
Other DBs
NCBI-GeneID:
107100417
NCBI-ProteinID:
XP_015254364
LinkDB
All DBs
Position
Unknown
AA seq
337 aa
AA seq
DB search
MKATSDGEEDEDDEEEFEEVPEKEGYEPHIPEHLRAEYGLDPSPSTSAAALSQQKAPPRR
PPAPPAPSSSSSSSSSSRRMKRMMEEEQDPTSAAATLRLLREKLPLQGEPSCSGSDGPGQ
SGPEQQAAEVPVVPFGLDLYYWGQEQPNAGKIIKSASQHQFWVPAEVEEEVESQELLAQS
RSRYISFPGKFVPVSHFCRAPLGNGALCQRQDRLKCPFHGPIVPRDSEGRPCREEDRQRE
EQRRKEQQPDWRDEELMRDIEAATGEDLGSSRNRRGKKKKKKFPNLSDLKQSSNTARSRL
QRKVFNKSTMRRVADVLSKADRRKHDKFSNQFNYALN
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgaaggccacctctgatggagaggaggatgaggatgatgaggaggaatttgaagaggtt
ccagaaaaggaaggatatgagccgcacattcctgagcatctccgagctgagtacggtctg
gatccgtccccctccacctcagccgccgccctctctcagcagaaggctccgcccaggagg
ccccccgccccacctgctccgtccagctcctcttcctcatcttcctcctccaggcggatg
aagaggatgatggaggaagagcaggacccaacgtctgctgccgccacgctgcgtctcctc
agagagaagctccccctccagggagagcccagctgcagcggttctgatggtccgggtcag
tcgggtccagagcagcaggctgctgaggttccagtggttccgtttgggttggacctttac
tactggggccaggagcagcccaacgctggcaagatcatcaagtcggcctcccagcatcag
ttctgggttcctgcggaggtggaggaggaggtggagagccaggagctgctggctcagagc
aggagccgctatatctccttccccgggaagttcgtccccgtcagccatttctgcagagcc
ccgctggggaacggcgccctgtgccagagacaggaccgcctcaagtgcccgttccacggc
cccatcgtcccccgagactcagagggacgaccgtgcagagaggaggaccggcagagggag
gagcagaggaggaaggagcagcagcctgactggcgtgatgaggagctgatgcgggacatc
gaggcagccaccggggaggacctgggctcctctcggaaccgcagagggaagaagaagaag
aagaagttccccaacctgagcgacctgaagcagagcagcaacacggcgcgctccaggctg
cagaggaaggtcttcaacaagagcaccatgcgcagagtagcggatgtgctgagtaaggcg
gacaggaggaaacacgacaagttctccaaccagttcaactacgccctcaactga
DBGET
integrated database retrieval system
