Cyprinodon variegatus (sheepshead minnow): 107100421
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Entry
107100421 CDS
T06110
Symbol
trappc11
Name
(RefSeq) trafficking protein particle complex subunit 11
KO
K20308
trafficking protein particle complex subunit 11
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvg04131
]
107100421 (trappc11)
Membrane trafficking [BR:
cvg04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
107100421 (trappc11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Foie-gras_1
Gryzun-like
Gryzun
NTS_TR130
Prefoldin
Motif
Other DBs
NCBI-GeneID:
107100421
NCBI-ProteinID:
XP_015254366
LinkDB
All DBs
Position
Unknown
AA seq
894 aa
AA seq
DB search
MAFLSELKQDTQNALKYYRAAYSLVHELRAHETNMLEIKTMAGFINYKICRLCFQHNTPL
DAIAQFRKHIDLCKKKIGSAELAFEHSAWMSKQFQSFGELFDEAIKLGLTAIQTQNPGFY
YQQAACYSQDRKQMAQQLCQAGTTYPSPDPLDTQSGGLDFYGQRPWRQGHQSIDPTDPEK
EKMGILALQIKERDVPHSELIIALLSNAVAQFKKYKCPRMKSHLMVQMGEEYYHAKDYTK
ALKLLDYVMCDYRTERWWPLLTAILTTALRCAYLMASVKDYIIYCMELLGRASTLKEEQK
SRIEKNLFKVLMNKVPEAEAECDPSSVSAARSLWSDRMALSGSNELTVEMQDYIPFIQCK
ARFQSPSFHVDQPIQLQVFLRADCPHPVSFTKLSVSLSNQEYNQWCVVEPSGPETRTLSP
WKPESYSFSFVARTEDVGRKVEITGVEVMLGSDGGRCVFLSWRGAGGDAASTQEALQASR
SSRRWGRGAEARQEPDWDGVTLQHSTMIISRVPKISVQLSHQPPALSNEMYRIGLTVQSQ
EDAVARDVRLTAGLKPGQEAGLGQNTHVTLDGSAVCDDSAPALLTEVPLGDLKPGEQLQT
CVFVRCVSTGPRVFLFHVAYSIDTAVEGRRIVCRCHKDETVAVETVVPFDVSVKFVSTKF
EPLEQVAVDVPFLLMTDVLSSSPWPLLLSSSQLQLLTVTSNTPQLQSQLQQVVLQTGEGA
SECFCLRVPPGASSNSTMATGQYILSWRRKCYGSDGPLIQTTVPLPHVVLESVPLYIYAD
LPSFGRVRESLPVRYHIENRTAQLQEVEIAVDPSDAFMFSGLKQVRLRVLPGTEQALLYN
FYPLMAGYQTLPQLSLSLPHCPTASGTALRRFLPQRIFVKPQGRQADDASIAAA
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcctcagtgagctgaagcaggacacccagaacgctctcaagtactacagagct
gcgtatagtctggtgcatgagctcagagcccatgagaccaacatgctggagatcaaaacc
atggcaggattcatcaactataagatctgccgtctgtgtttccagcacaacacgcctctg
gacgctatagctcagttcaggaagcacatcgacctgtgtaagaagaagatcggcagtgct
gagctggcctttgaacactcggcgtggatgtctaaacagttccagtctttcggcgagctg
ttcgatgaggcgataaagttaggtctgaccgccatccagacccagaacccaggtttctat
taccagcaggccgcctgctacagccaggaccggaagcagatggcccagcagctctgccag
gctggaaccacctacccttcccctgaccctctggacacccagagtggaggactggacttc
tacggccagaggccctggagacaaggacaccagagtattgatccaactgatccagagaag
gagaagatggggattctggctctgcagattaaagagagagacgtcccccactcggagctg
atcattgctcttctcagcaatgctgttgcccagtttaagaagtacaagtgtcctcggatg
aagagtcacctgatggtgcagatgggagaggaatactaccatgctaaagactacaccaag
gccctgaagttgctggactatgtaatgtgtgattatcgcacagagcgatggtggcctctg
ctgacggccatactgaccacggcgctgcgctgtgcttatctgatggccagtgtgaaggac
tacatcatctactgcatggagctgctgggcagagcttctacccttaaggaggagcagaag
tcaaggatagagaagaacctttttaaagtgctaatgaacaaggttccggaggctgaggca
gagtgtgatccgtcttctgtcagcgccgccaggtcgctgtggagcgaccgcatggctttg
tcaggatccaatgaactgaccgtggaaatgcaggactacatcccattcattcagtgcaaa
gcgcggttccagtctcctagcttccatgtggaccagcccatccagctgcaggtgttcctc
agggctgactgtccgcaccctgtgtccttcactaagctcagcgtcagcctcagcaaccag
gaatacaaccagtggtgtgtggtggaaccatcgggtccagagaccaggacgctgtcacca
tggaaacctgaaagctacagcttcagctttgtggccagaactgaagacgtggggcggaag
gtggagattaccggtgtggaggtgatgctgggcagtgacggcggccgctgcgtgttcctg
agctggagaggcgctggcggagatgccgcctccacccaggaagccctgcaggccagcagg
tcgtcacggcgatgggggcggggcgccgaggcccgtcaggagccggactgggacggcgtg
acgctgcagcacagcaccatgatcatctccagggtcccgaagatcagcgtccagctgagc
caccagcctcctgctctgtccaacgagatgtaccgcatcggcctgaccgtccaatcacag
gaggacgctgtagccagggatgttaggctcaccgccggtctgaagccaggtcaggaggcc
ggtctgggtcagaacacccatgtgacgctggacgggtcggccgtgtgtgacgacagcgcc
ccggctctgctcaccgaggttcctctgggcgatctgaaaccaggagaacagctgcagacg
tgcgtgtttgtgaggtgcgtgtcaaccgggccgcgggtcttcctgttccacgtggcctac
agcatcgacacggctgtggaaggacggcgcatcgtgtgcagatgtcacaaggatgagaca
gttgctgtagagaccgtggtcccgtttgacgtctcagtgaagttcgtgtccaccaagttc
gaaccgctggagcaggtggcggtggatgtccccttcctgctgatgaccgacgtcctctcg
tcttctccgtggcctctgctgctaagctcctcccagctgcagctgctgacggtgaccagc
aacactcctcagctgcagtcgcagcttcagcaagtggttctacagacgggtgaaggagcc
agtgagtgtttctgtctccgagtgccaccgggcgccagcagcaacagcaccatggcaaca
ggacagtacatcctgtcatggaggaggaagtgttatggttccgacggccccctgatccag
accaccgtccctctgcctcatgtcgtcctggagtctgtcccgctctacatctacgccgat
cttccttcctttggacgggtcagagagtctcttccggtccggtaccacatagagaacagg
acggcccagctgcaggaggtggagatcgctgtggatccatcagatgccttcatgttctct
ggactcaaacaggtgcggctccgtgtgctgcccggtaccgagcaggccctactgtataac
ttctacccgctgatggcgggctaccagacgctgccacagctcagcctcagcctgccgcac
tgccccaccgccagcggcaccgcgctcagacgcttcctgccacagcgcatcttcgttaag
cctcagggtcggcaggcggacgacgcctccatcgctgcagcctga
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