Cyprinodon variegatus (sheepshead minnow): 107100433
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Entry
107100433 CDS
T06110
Name
(RefSeq) AF4/FMR2 family member 3-like isoform X1
KO
K15195
AF4/FMR2 family member 3
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cvg03021
]
107100433
Transcription machinery [BR:
cvg03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
107100433
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AFF4_CHD
AF-4
AF4_int
YhdX
Poty_coat
Motif
Other DBs
NCBI-GeneID:
107100433
NCBI-ProteinID:
XP_015254384
Ensembl:
ENSCVAG00000019194
LinkDB
All DBs
Position
Unknown
AA seq
1239 aa
AA seq
DB search
MPTVLCGKGKLSIVCFLLRYTYSQGKRGQSNFCTRGILEDMTQSWQSQQALGGDQAQRII
YNSKDARHSAVQQRQSRGDPQQRMARHPYVAPHKSMLADDLKVSSDEDDSQRVIHESASW
ERHSLAAQRAYTHSRRVRHSSSDSSDSDSSAESSRSSLHSRSLSPELHPEPSSPAATQPL
CNNKEIDHRSATQWQLDKWLERSKKRSARTDQDFSQTTEEPQVSPISQRAPSPARSWDSN
QEYSPSQTPIPSPRFSYSQNNSPVPSPGYSFCPSPSPFPSTCPSPSPSPQHSPPPSPVQS
ICPSPCGTPRTSRSPSPIPRHPPKSPSPSLPAPSSFDYLEDQSQKHSHPVLTSTPYRTKI
RPWIPPLPTSSSKSKPTSHKHPEALYHHKPKNHSTHSQVQSQRKSQGSVILKSQPNLNQK
PTPKPTSFSRTKELSDTHKNKKSTLLDQTQSSQYKSKPHPQFQQPSSHSPKRSKHLVPTG
RETSTDPGTHSQSTCNTTSISVTKSSTGPFPNLIQWTKLWKPAEPKLTHVSHTKTSQRKL
PSKEREVDQRTSHLSQTEGRIQERKEDRPHLEKQQGKVERKEDRRLAEEQLLRRRIQSSA
EEEEEEEDRATEHEGVKRDKERGKHRRKVEHAKEEWKTVKQRVPPNHKQHLPREGSDCQG
RPKKGRRCDEDREVPKDLSPVLSTHSSTPQIRSFKSSSSSSSTTPYNSDSESESLVSVAK
VSDDFNSHRRVPKTGDQASSRPDTTKPKTVYPRRASSGNSCEGQQSEAKQRLYTLVPFGR
GEKTPSTAQRGLRNLVVQIDLCLLKRVPESPTNPNPKKSSPSISAPSNKEKPKESMKHIY
DHETSTKDCKRKRKLDNGITQKETKRSLLYPSEAPGQKEPSSLATENIVTETVHNGYLEE
YLDNKRPVSPLSPLSPLPQSPEPAKPPAKAKTTTEQQQSRSQKTKDKNRDVAVKPKMEVE
SVKVSRQPQPQAPSESTWGPTGHRGTVPNKEISHHAEYYLHEAKRMKHRADAMVDKLGKA
VNYIDAALSFMECGKAMEEGPLEAKSPFTMYSETVELIRYAMRLKSHSGPGARQEDKQLA
VLCFRCLALLYWQMFRLKKDHALKYSKVLLDYFKSSPKVPTTPPGWMDSGKATTGLLSSQ
SPPAKHHRRGSTAGSSTASLISIPQRIHQMAANHLNITNSVLYSYEYWEVADNLAMENKE
FFNYLNTLSGPLTLHSSIAHAVQYTRQALQWIRISAKLN
NT seq
3720 nt
NT seq
+upstream
nt +downstream
nt
atgcctactgtcctctgtggcaaagggaaactttccattgtctgctttttactccgttac
acatattctcagggaaaaagaggccaaagcaacttctgcaccagaggtattcttgaggac
atgactcagtcctggcaatcccagcaagccttggggggcgaccaagctcagcgaatcatc
tacaactcaaaggatgcaagacattcagccgtacagcaaaggcaaagtcgtggggatcct
cagcagcgaatggctcgtcatccttatgtggcacctcataaatcaatgcttgctgatgac
ctgaaggtgagcagtgatgaagatgacagtcagagggtcattcatgagtccgcttcctgg
gagcgacacagcctggcggctcagcgagcatacacacatagcaggagggtgagacattcc
agctcagactcctccgactcagactcctctgcagagtcaagcagaagcagccttcattcc
cgcagcttgagtccagaacttcacccagaaccttcgtcgcctgcagccacgcagccactg
tgcaacaacaaagagattgatcatcgttcagctacccaatggcaattagataaatggctg
gaaaggtcaaagaaaagatctgccaggactgatcaagatttctctcaaactactgaagaa
ccccaggtttctcccataagccagagagccccatcacctgccaggtcatgggacagcaat
caggagtacagcccaagccaaacccccattccaagtccacggttcagttacagtcaaaat
aacagcccagttcccagccctggttacagcttctgtccaagtcccagcccatttcccagc
acctgtccaagtcctagccctagtccacagcatagcccacctccaagtccagttcaaagt
atttgtcccagtccctgtggaacacccagaaccagtcgaagcccaagccctataccaaga
catcccccaaaaagtccaagtcccagtttacctgctccttcgagttttgactacctggaa
gatcagagccaaaagcattcacatcctgttctaacgtctaccccctacaggactaaaata
agaccatggatacctccattacctaccagcagttcaaagagtaagcccacaagtcacaag
catcctgaagcattgtatcaccacaaacctaagaatcactccacacacagccaagttcaa
agccaaaggaagtcgcagggatcagtaattttaaaatcccaaccaaatctcaaccaaaaa
cctacacccaagcctacttcattttcaagaactaaagagctctctgacactcacaaaaat
aaaaagtcaacacttttagatcaaacccaaagcagccaatacaaatccaagccacaccca
caatttcaacagccttcaagccacagccccaaaagatcaaagcatttggtgcccactggc
cgagaaaccagcacagatcccggtactcattcccaatctacctgcaacactactagcatt
tctgttactaagtcaagcactggaccatttcctaaccttatacagtggacaaagctgtgg
aagcctgcagagccaaaactcacacatgtaagccataccaaaacctctcaaaggaagctc
ccatctaaggaacgggaagtggatcagagaacctctcatctctcccaaacagaggggaga
atacaggaaagaaaggaggatagacctcaccttgaaaagcaacaggggaaagtagaacga
aaggaagacagaaggctggcggaggagcagctactaagacgtcgaatccaaagttcggca
gaggaagaagaggaagaggaggacagagcaacagaacacgagggtgtgaaaagggacaaa
gaaagagggaaacataggaggaaggtagagcatgcaaaggaagaatggaagacagtcaaa
caacgagtgcctcctaaccacaaacaacacctccctcgagagggttcagactgtcaaggg
aggccaaaaaagggaaggagatgtgacgaggatagagaagtaccaaaagacttatcacct
gtactatccacacactcctcaactccccaaatacgatctttcaagtcctcctcatcatca
tcttctacaaccccctacaactcggactccgaatcagaaagtcttgtttctgtagctaag
gtttcagatgatttcaattctcacaggagagttcccaaaacaggagaccaagcttcaagc
agacctgacaccaccaagcctaagacagtataccccagacgagcaagctcaggtaattca
tgcgaggggcagcaaagtgaggcaaagcaaaggctctacacacttgtcccatttgggcga
ggggaaaaaacaccttccactgcccagcgggggctaagaaatctggtggtgcagatagac
ctctgtcttctcaagagagtaccagaaagccctacaaacccgaaccctaaaaaatcctcc
ccttccatatctgctccatcgaataaggaaaagcctaaagagagtatgaaacacatttat
gatcatgagacttccaccaaagactgcaagaggaaacgtaagctggacaatggcataaca
cagaaagaaaccaagaggagtcttctttatccaagcgaggccccagggcagaaagaacct
tcatcattagcaactgagaacatcgtcaccgagacagtacacaatggatatctggaggag
tacttggacaacaagaggccagtttcccccttgtctcctttgtctccactgccccaaagt
cctgaacccgccaagcctccagccaaagcaaagacaacgactgagcagcagcagtcacgc
tcacagaagaccaaagacaagaacagagatgtagctgtaaagcctaagatggaggtggag
agtgtaaaagtatcaaggcagcctcagccgcaggcaccatcagagtccacctggggaccc
actggtcacagagggactgtaccaaacaaagaaatttcccaccatgctgaatactactta
catgaagctaaacggatgaagcatcgtgctgatgcaatggtggacaagttgggaaaagca
gtcaactacattgatgccgctctttcctttatggaatgtgggaaggcgatggaggaaggg
ccacttgaggcaaagtctcctttcaccatgtattccgagacagttgagttgatcaggtac
gctatgaggctaaagagtcactctggccctggagcaagacaggaagacaaacagctggct
gtcttgtgctttcgatgccttgccctcctttactggcagatgttccgcttaaaaaaagat
catgcactaaagtactctaaagtgctgctagactatttcaagagttctcccaaagtgcct
acaacgccacctggatggatggactctgggaaggctacaacaggactcttgtcctcacaa
tcaccccctgcaaaacaccacagacggggttcaactgcaggcagcagcactgcatccctt
ataagcatcccccaacgtatccaccagatggcagcaaaccacctgaacatcaccaacagt
gtcctgtacagctatgagtactgggaagtggcagacaaccttgcaatggagaataaagaa
ttcttcaactacttgaatactttatctgggccattgactcttcacagtagcattgctcat
gctgtccaatacaccaggcaggctcttcagtggatacgcattagtgccaaactgaactga
DBGET
integrated database retrieval system
