Cyprinodon variegatus (sheepshead minnow): 107100444
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Entry
107100444 CDS
T06110
Symbol
gabra5
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-5
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04080
Neuroactive ligand-receptor interaction
cvg04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
107100444 (gabra5)
04082 Neuroactive ligand signaling
107100444 (gabra5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cvg04040
]
107100444 (gabra5)
Ion channels [BR:
cvg04040
]
Ligand-gated channels
GABA-A
107100444 (gabra5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
DUF7205
Motif
Other DBs
NCBI-GeneID:
107100444
NCBI-ProteinID:
XP_015254400
Ensembl:
ENSCVAG00000019060
UniProt:
A0A3Q2DBJ5
LinkDB
All DBs
Position
Unknown
AA seq
457 aa
AA seq
DB search
MGNGICYTMKRLCLFLLLVSITCRLSFSQEVAGSPRQTELNDNITIFTRILDGLLDGYDN
RLRPGLGEKVTEIKTNIFVTSFGPVSDTEMEYTIDVFFRQSWKDERLCFKGPMEMLALNN
LLASNIWTPDTFFLNGKKSIAHNMTTPNKLLRLKDDGTLLYTMRLTISAECPMQLEDFPM
DAHACPLKFGSYAYPVSEVVYTWTQGAAKSVVVAEEGSRLNQYHLIGQTAGTEDIYTSRG
QYTVMMAHFYLKRKIGYFVIQTYMPCFMTVILSQVSFWLNRESVPARTVFGVTTVLTMTT
LSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRSWAWDGKKAMEAQHP
KKRDPLALSKKPNNTCSAGVNYTTNLTKDASISTISNSTTIQLKPSESKAPDPKKTYNSV
SKIDKMSRIVFPVLFGTFNLVYWATYLNREQMIKEAE
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgggcaatgggatatgctacacaatgaaacgtctatgcctttttctcttgcttgtgagc
atcacctgccggctgagcttttctcaggaagtagctggaagtcccagacagacagaatta
aacgacaacatcaccatctttacccgcatcctggatggactgctcgatggttatgacaac
agactccggcccggtctgggagaaaaggtgacggagatcaaaacaaacatctttgtcaca
agctttggtcctgtctctgacacggaaatggaatacaccatcgacgtcttcttccgtcag
agctggaaagatgagaggctctgcttcaaaggcccgatggagatgctagccctgaataac
ctgctggccagcaatatctggacgcccgacaccttcttcctcaacgggaaaaagtccatt
gcacacaacatgaccacgcccaacaagctgctgcggctcaaagacgacgggacgctcctt
tacaccatgaggctcaccatctctgcagaatgtccaatgcaactggaggatttccccatg
gatgcccacgcctgccccctaaagtttggaagctatgcctatccagtctcagaggtggtc
tacacctggactcagggagcagccaagtctgtggtggtggcagaggaaggctcaagactc
aaccagtaccatctgattggccagacagcaggaacagaggacatctacaccagtcggggt
cagtacacggtgatgatggctcacttttacctgaagaggaagataggttattttgtcatc
cagacctacatgccatgcttcatgaccgtgatcctgtcacaggtttccttttggctgaac
cgtgagtctgtcccagcaagaaccgtctttggtgtgaccacagtgctcaccatgaccact
ctcagcatcagtgctcgaaactccctacccaaagtggcgtatgccactgccatggactgg
ttcattgcagtgtgctatgcctttgtcttctcagcgctcattgaatttgccacagtgaat
tatttcaccaaaaggagttgggcctgggatgggaaaaaagcaatggaggctcaacatccc
aagaagagagacccattagctctgtcaaagaagcccaacaacacctgctcagccggtgta
aattatacaaccaacctcaccaaggatgcatccatctccaccatttcaaacagcacgact
attcagctcaaaccgtccgaaagcaaggccccagaccccaaaaagacttacaacagcgtg
agcaagatcgacaagatgtccaggattgtgttccctgtgctttttgggaccttcaacctg
gtgtactgggctacgtatctcaacagggaacaaatgataaaagaagccgagtga
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