Cyprinodon variegatus (sheepshead minnow): 107100466
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Entry
107100466 CDS
T06110
Name
(RefSeq) red-sensitive opsin
KO
K04251
long/medium wavelength-sensitive opsin
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
cvg04030
]
107100466
G protein-coupled receptors [BR:
cvg04030
]
Rhodopsin family
Vision
Opsin
107100466
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srw
MpPF26
7TM_GPCR_Srsx
Motif
Other DBs
NCBI-GeneID:
107100466
NCBI-ProteinID:
XP_015254461
Ensembl:
ENSCVAG00000001159
UniProt:
A0A3Q2DLA5
LinkDB
All DBs
Position
Unknown
AA seq
357 aa
AA seq
DB search
MAEQWGAQVFAARRHNEDTTRGSAFTYTNSNHTRDPFEGPNYHIAPRWVYNVATVWMFFV
VVLSVFTNGLVLVATAKFKKLRHPLNWILVNLAIADLGETVFASTISVCNQFFGYFILGH
PMCVFEGYIVSTCGIAALWSLTIISWERWIVVCKPFGNVKFDAKWAIGGIVFSWVWSAVW
CAPPIFGWSRYWPHGLKTSCGPDVFSGSEDPGVQSYMIVLMITCCIIPLAIIILCYLAVW
LAIRAVAMQQKESESTQKAEREVSRMVVVMILAYCVCWGPYTFFACFAAANPGYSFHPLA
AAMPAYFAKSATIYNPVIYVFMNRQFRTCIMQLFGKQVDDGSEVSTSKTEVSSVAPA
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggcagagcaatggggtgcacaggtgtttgctgcgaggcggcacaatgaagatacaacg
aggggctctgcattcacgtacacaaacagcaatcataccagagatccttttgagggacca
aactaccatatcgctcctcggtgggtttacaacgttgctacagtatggatgttttttgtg
gtcgttctatcagtcttcaccaacggcctcgttttggtggccactgcaaagttcaagaaa
ctccgtcatccccttaactggattcttgtcaaccttgctattgctgatcttggagagacg
gtctttgccagcaccatcagcgtgtgtaatcagttttttggatatttcattctgggacac
ccaatgtgtgtctttgaaggctatatcgtctcaacttgtggtattgctgctctttggtcc
cttactatcatctcttgggagagatggatagttgtgtgcaaaccttttggaaacgtcaag
tttgatgccaaatgggccataggtggaattgtgttctcctgggtctggtctgctgtgtgg
tgtgctcctcccatctttggatggagcaggtattggccccatggactgaagacatcctgt
ggacctgatgtgttcagtggaagtgaggaccctggagttcagtcctacatgattgttctt
atgattacatgctgcatcattcctctggccatcataatcttatgctacctggccgtgtgg
ttggccattcgtgctgttgctatgcagcagaaggaatctgagtcaacccagaaggctgag
agggaagtatccaggatggtcgttgtgatgatcctggcttactgtgtctgctggggacct
tacacctttttcgcctgctttgctgcagccaaccctggttattctttccatcctttggct
gctgcaatgcctgcatactttgccaagagtgccaccatctacaacccagttatctatgtc
ttcatgaaccgacagttccgcacatgcatcatgcagctctttggaaaacaggtggatgat
ggttctgaagtgtccacatcaaagacagaagtgtcctctgtggctccggcataa
DBGET
integrated database retrieval system
