Cyprinodon variegatus (sheepshead minnow): 107100564
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Entry
107100564 CDS
T06110
Symbol
fam188b
Name
(RefSeq) protein FAM188B isoform X1
KO
K22647
ubiquitin carboxyl-terminal hydrolase MINDY-3/4 [EC:
3.4.19.12
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cvg04121
]
107100564 (fam188b)
Enzymes [BR:
cvg01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
107100564 (fam188b)
Ubiquitin system [BR:
cvg04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
MINDY
107100564 (fam188b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MINDY-3_4_CD
Motif
Other DBs
NCBI-GeneID:
107100564
NCBI-ProteinID:
XP_015254589
Ensembl:
ENSCVAG00000020634
LinkDB
All DBs
Position
Unknown
AA seq
688 aa
AA seq
DB search
MVPSVEEVSSSLVREYLSRKGLRRTIACMDEELPRTQASINNRSLLKQLLNIEDLYRKNK
VQKSPLKTLLEIIVKHHIERLHHEKITTGDCEQIDQTTGSASDCPPGTPSIINETKAKDM
TPAFCMTKYTETRSEVKEKCNIQVTNPSMTSKKDRPAALNSNTFLINKTDNQEVQSLVPS
KQEDFSKREARGDGLIDGVAQRRKTGHIRRGLMAGPVPKETNRKRQSQTVELAQPILCVE
KGNLESLAGPQLAFKNTSGGGEENLDVNLTEENLYKKNYRRKGQSTGNEIKMKTRPNVHE
LNVSEMVLDDIDDVDLPEVSLQAPVLKCSFVGCPVDQHTAMELKTVLLGSSLNSFSAEWI
NQGFAFSNTRELRYGIVQKKGGPCGVLATIQAFFLKKLLFEHTDNSSNILLRLRPSDSTR
RQCLVLALSEVLWRAGEEQKAVVVISSGRSHFTPVGQYRSERLLDKMMWFSVDNINDLQV
ILEQHIEQYETEVLGCILLTISAVLSRSIEKVREDMDLHTTTLIGAHGYCTQELVNLLLC
GRAVSNVFDNDIELDSGNGNMTLLKGIKDRCQVGLLSLFEHYNICQVGNYLKSPSYPVWV
VCSESHFSVLFGLQRELLISQKEELEFDLYYYDGLANQQEEIRLTVSVGKLTQNFQEIDA
DLIPPLELCIRTRWKDALVNWNETEPLL
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggttccttctgtggaagaggtttcctcgtctctagtgcgggaatacctgagcaggaag
ggcctgagaaggaccatcgcctgtatggatgaggaacttccacgcactcaggccagtata
aacaaccgatcattgttgaagcagttgctaaacattgaagatctctacagaaaaaataag
gttcagaaatcgcctttgaaaacattattggaaatcattgtgaagcatcacattgaacgg
ttgcaccatgaaaagatcaccacaggagattgtgagcagatagaccaaactactggctca
gcatccgattgccctccaggaacaccatcaattataaatgaaacaaaggcaaaagacatg
acaccagcgttttgtatgacaaaatacacagaaaccaggtctgaagtaaaagaaaagtgc
aatattcaggtgacaaatccatcaatgacttctaagaaagacagacctgctgcattgaat
tcaaatactttcttaattaacaaaacagacaatcaggaagtccagtcactagtgccttct
aagcaggaggacttttccaaaagagaggcacggggagacggtttaatcgatggggtcgcc
cagagaagaaaaaccggtcatatcagacgaggcttaatggctggaccagtacctaaggaa
acaaatagaaaaaggcagagtcagacagtcgaattggcccagccaatactctgcgtggaa
aagggaaacctggaatccttagctggacctcagctggctttcaaaaacacatctggcggg
ggtgaagaaaatctagatgtcaacttaacagaggaaaacctgtataaaaagaactacaga
agaaaaggacaaagcacagggaatgagataaagatgaagaccagaccgaatgtccatgaa
ctaaatgtgtcagagatggtgttagatgatattgatgatgttgatctgccagaagtgtcc
cttcaggcgcctgttctaaagtgtagctttgtaggctgcccagtggaccagcacactgcc
atggaattgaaaacagttctccttgggtccagcttgaattctttcagtgctgagtggata
aatcagggttttgcattttcgaacacacgtgagctcagatatggcattgtgcagaaaaag
ggtggtccctgtggagttctagcaacgattcaagcattttttctgaagaagcttctattt
gaacacactgataacagcagcaacatccttctgaggctgagaccttccgacagtaccaga
agacagtgtcttgttttagctctgtctgaagttttgtggcgggctggggaggaacaaaaa
gcagtagttgtaataagttcaggaagaagccatttcactccagttggtcagtacagatct
gaaagactgcttgataagatgatgtggttctctgtggacaacatcaacgatctgcaggtc
attctggaacagcacattgagcagtatgaaaccgaggtcttaggatgcattcttctgacc
atctcggctgttctctctcgatccattgaaaaagtgagagaggatatggacctccataca
actacgctaataggagctcatggctactgcactcaggagttggtcaacctgctgctatgt
ggcagagcggtttctaatgtgtttgataatgacatagagctcgactcgggaaacggcaac
atgactctgcttaagggaataaaggaccgctgccaagtcggccttctgtccttgtttgaa
cattataatatctgtcaggtgggaaattacctgaagtctccctcctaccctgtgtgggtg
gtgtgcagtgaaagccacttcagtgtgctgttcggcctgcagagggagctgttgatcagt
cagaaggaagaactggagtttgacctgtactattatgatgggctggccaatcagcaggag
gaaatccgcctcactgtttctgttggcaaattgactcagaactttcaagaaattgatgct
gatctcattcctccacttgagctctgcatcagaaccaggtggaaagatgcattagtcaac
tggaatgagaccgaaccacttctctga
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integrated database retrieval system
