Cyprinodon variegatus (sheepshead minnow): 107100659
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Entry
107100659 CDS
T06110
Symbol
efl1
Name
(RefSeq) elongation factor Tu GTP-binding domain-containing protein 1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
107100659 (efl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cvg03009
]
107100659 (efl1)
Ribosome biogenesis [BR:
cvg03009
]
Eukaryotic type
Pre-60S particles
GTPases
107100659 (efl1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFL1
EFG_C
EFG_III
GTP_EFTU_D2
EF-G_D2
PEA2_middle
EFG_IV
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
107100659
NCBI-ProteinID:
XP_015254716
Ensembl:
ENSCVAG00000011863
LinkDB
All DBs
Position
Unknown
AA seq
1025 aa
AA seq
DB search
MPFEGGQEYLLNLIDSPGHVDFSSEVSTAVRLCDGAIVVVDAVEGLCPQTQAVLRQAWLE
NIRPVLVINKMDRLITELKLTSLEAYNHLVKILEQINAVTGALFTSKVLEERAEKVREEE
EDRDLDLSGDQVYDWSAGLEEADDSNLYFSPDQGNVVFASAIDGWGFSVQHFASIYSKRV
GIRAWVLLKTLWGDFYLNAKTKRIMKGAQAKGKKPLFVQLVLDNIWSLYDAVITRRDKDK
VEKVVSSLEIKVMSRDLRHSDPKVLLHAICSQWLPVSNAVLSMVCEKLPSPLEMAAERVE
KLMSVGTRPFESLPERTQELKTAFLRCSSGTNDPVIIFVSKMFAVDIKALPQHRPRPLSQ
EQIAQRRDVARQRHAEKRLEGAALPDGPPVEAKTPSLPPKDTKEEEEEEEQQREVFVAFA
RIYSGTVKKGQRLFILGPKYDPAQGLSLLPDGSSASDCLVEVPHLSCCTLEKLYLLMGRE
LEELEEIPAGNVLGIGGLEEYVLKSATLSASPACPPFIPLNFEATPIVRVAVEPKHPSEM
PKLVRGMRLLNQADPCAEVLIQETGEHVLVTAGEVHLQRCLDDLRERFAKIDISVSKPII
PFRETVVRPPKVDMVNEDLGRQQKVAVIHQVKEERSSESQQMDSNRLVTVTTPNKLATVG
VRAVPLPQEVTVLLERRLDVIRTLELINMSLREGKALDINPRTMEAIKELKDQLESLLQG
RKWRSAVDRIWAFGPRRSGPNILLNSIKDYSRASIWQCLESRQGSDPTRTQLPPLRDFDN
SIVSGFQLATLSGPMCEEPLMGVCFSVERWDVQSSALSLQPESLKDSVPNKADRDVDGDM
TAGRPLAERRIEAPSADCYGPVSGQLIAAMKDACRHAFQAQPQRLMVAMYTCEIMATAEV
LGRVYGVLGKREGRVLHEEMKEGTDMFIITAVLPVAESFGFADEIRKRTSGLASPQLVFS
HWEVINSDPYWVPTTEEEYLHFGEKADSENQALKYMNAVRRRKGLYIEEKIVEHAEKQRT
LGKNK
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgccctttgagggtggtcaggagtaccttctaaacctgatcgactctccgggtcacgtt
gacttctcttccgaggtttccacagctgtcaggctgtgtgatggagccattgtggttgtt
gatgctgtggagggcctgtgtcctcagacccaggctgtactccgacaggcatggctggag
aacatcaggcctgttctggtcatcaataagatggacagactcatcaccgagctgaagctc
acctctctggaagcctacaaccacctggtgaagatcctggaacagatcaatgctgtgaca
ggggctctgttcacatctaaagttctggaagaacgagcagagaaagtgagggaggaggag
gaggacagggacttggacctgagtggagatcaggtctatgactggagcgctggactggag
gaggctgacgactccaacctctacttttcccctgaccaaggaaatgtggtgtttgccagt
gccatagatggatggggtttcagcgttcagcattttgcctccatatacagtaagagggtg
gggatcagagcctgggtgctgctgaagaccctgtggggagatttctacctcaacgcaaaa
acaaaaaggatcatgaagggggctcaggccaaaggaaagaagccactgttcgtgcagctg
gttctggataacatctggagtttatatgatgcagtcatcaccagaagagacaaagacaag
gtggagaaggttgtatcatccctggagataaaggtgatgtccagagacctgcgtcactct
gaccctaaagttctcctacatgctatctgcagccaatggttaccagtgtccaacgctgtc
ctctctatggtgtgtgagaagctccccagtccattagagatggcagcagagagggtggag
aagctgatgagtgtaggaacccgtccttttgaatccctacctgaaaggactcaggaactg
aagacagcgttcctgcggtgttccagcgggaccaatgatccagtcatcatctttgtgtcc
aaaatgtttgctgtggacattaaggcgttgcctcagcacagacccaggcctctgagccag
gaacagatcgctcagcgcagagacgtggcaaggcagaggcacgctgagaagaggctggaa
ggtgccgcgctcccagatgggcccccagtagaagcaaagacgcccagtctgcctccgaag
gacacaaaggaagaggaggaggaagaggagcagcagagggaggtcttcgtagcgtttgca
cggatctacagtggaacagtgaagaaaggccagcggcttttcattttgggcccaaagtac
gaccctgctcagggcctcagtctgcttccagatggtagcagtgcatctgactgcttggtg
gaggtgccccacctgtcctgttgtaccctggagaagctttatctgctcatgggtcgagag
ctggaagagttagaagagatccctgctgggaacgttttgggtattggaggtctagaggag
tacgtcttaaagtcggccaccctgtcagcctccccggcctgcccccccttcatcccactc
aactttgaagctactcctattgtacgagttgccgtggagccaaagcatccaagtgagatg
ccaaagctggtccgtgggatgcgtctcttgaaccaggcagatccgtgtgctgaggttctg
atacaggagacaggagagcatgtcctggtgacggccggggaggttcacctgcagcgctgc
ttggatgacctcagagagagatttgccaaaattgacattagcgtgtccaagcccatcatc
ccgttcagggagacggtggtccggccccccaaggtggacatggtgaacgaggatctgggc
aggcagcagaaagtggctgtcattcatcaggtaaaagaagaacgttcatctgagtcccag
cagatggactctaatagactcgtcaccgtcaccactcccaacaaactggcgactgtgggc
gtgcgggcagtcccattaccacaggaggtgacggttcttctggagaggagattagacgta
atccggactctggagctgatcaacatgtccctcagggaggggaaagctctggacataaat
cccaggactatggaggccataaaagagctgaaggaccagctggaaagcttgctgcaagga
aggaagtggcggagtgctgtggaccggatctgggcttttgggccccgcaggtccggtcca
aacatactcctgaacagcattaaggactacagccgagcgtcgatatggcagtgtctggaa
agcaggcaaggcagtgaccccaccagaactcagcttcctccactgcgggactttgataac
agcatcgtcagcggcttccagctggcaacgctctccggtcccatgtgcgaggagcccctg
atgggtgtttgcttctcggtggagaggtgggatgtccagtcctcagctttatcgctgcag
ccagaatctttgaaggactctgttcccaataaagctgatagagatgtcgatggggatatg
acagcaggccgtcctctggctgagcggaggatagaggctccgtctgcggactgctacggg
ccggtgtctggccagctgatcgccgccatgaaggatgcctgccgccatgctttccaggct
cagccccagaggctcatggtggccatgtacacctgcgagatcatggcgaccgctgaggtc
cttggccgggtctacggagtgctgggaaagcgcgagggtcgggttctacatgaggagatg
aaggaggggacggatatgttcatcatcacagctgttcttcctgtcgctgagagctttggc
tttgctgatgagatccgcaagagaaccagcgggttggccagtccacagctggttttcagc
cactgggaggtgatcaacagcgatccgtactgggttcccaccacagaagaagaatacctg
cacttcggggagaaggcagactctgagaaccaggccctcaaatatatgaatgctgtccgc
cggcggaaaggtctctacattgaggagaagattgtggagcacgcagagaaacagaggacg
ctgggcaagaacaagtag
DBGET
integrated database retrieval system
