Cyprinodon variegatus (sheepshead minnow): 107100851
Help
Entry
107100851 CDS
T06110
Symbol
hpse
Name
(RefSeq) heparanase
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg00531
Glycosaminoglycan degradation
cvg01100
Metabolic pathways
Module
cvg_M00078
Heparan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
107100851 (hpse)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cvg00536
]
107100851 (hpse)
Enzymes [BR:
cvg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
107100851 (hpse)
Glycosaminoglycan binding proteins [BR:
cvg00536
]
Heparan sulfate / Heparin
Enzymes
107100851 (hpse)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_79n
Motif
Other DBs
NCBI-GeneID:
107100851
NCBI-ProteinID:
XP_015254997
LinkDB
All DBs
Position
Unknown
AA seq
531 aa
AA seq
DB search
MYSTLFFLLTFFSYRTGGNRPFNGRGPVGLDLDLDLDLDLDLDLSTVVRRVDPRFLSVTI
DASLASQERFMLLLRSQRIRTLTKALSPAFLRFGGTRQDFMVFSPQSSQQPDADGSCSRV
ELSWWLEQKLKEDWIQHQLILLKEDQQKQYHRIQFTELTVDELNSFSSCSGLDLIFGLNA
LLRNTDNSWNSSNARSLLQYCESKQYKMSWELGNEPNSYEKKAGIRVDGYQLGLDFSHLR
KILSESKLYRDAGLYGPDVGQPHSHRVDLLKSLLHAWTHSISMSVSYYVNGRDTSLDDFL
DPEVLDTLAVKTNEVLEKVEQESPGKAVWLGETSSAYGGGALGLSDTFVSGFMWLDKLGL
GARLGLEVVMRQVLLGSGSYHLIDDNLDPLPDYWLSLLYKKLVGPEVLNVSDSGRNKRVR
LYLHCANRKSYARGAVVLLWMNLGRKLARISLPDLIANSTVDTFVLQSDQLGEEGLESRS
VQLNGVLLKMVDDKTLPDLSGARLPAAGHVKLPAYSLGFFVFLEARASACS
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgtactccactttatttttccttcttaccttcttctcttaccggaccggagggaaccgg
cctttcaatggaaggggaccggttggactggacctggacctggacctggatctggatctg
gatctggatctgtccacggtggttcgccgggtggatccccgctttttgtccgtcaccatc
gacgccagcctggcttcacaggagagattcatgctgctgctgaggtctcagaggatccgg
actctgaccaaagctctgagtccagcctttctgagattcggaggaaccagacaggacttc
atggttttcagtcctcagagcagccagcagccggatgcagatgggtcttgcagcagagtt
gaactgtcctggtggctggagcagaagctaaaagaggactggattcagcatcagctcatc
ctcctgaaagaggaccaacagaaacagtaccatagaatccagttcacagagctcactgtg
gatgagctgaactccttcagtagctgcagtggcctggatctgatctttggcctgaacgct
ctgctcaggaatacagacaacagctggaacagcagcaatgcgcgctctctgctccagtac
tgtgagtctaaacagtacaaaatgtcgtgggagctggggaacgagcccaacagttacgag
aagaaggctgggatccgtgtggacggataccagctcggactggatttcagccacctcagg
aagatcctgtcagagtccaaactgtaccgggacgccgggctgtacgggccagatgtgggc
cagccacacagccacagagtggaccttctaaagagtctgcttcatgcatggactcattcc
atctctatgtctgttagttactacgtgaatggcagggacacttcattagatgactttctg
gatcctgaagttctggacactctggctgtgaaaaccaatgaagtcctagagaaagtggag
caggagtctcctgggaaggcggtgtggcttggagagaccagctcagcctatggaggagga
gcgctgggactgtcagacaccttcgtctcaggatttatgtggctggataaactgggcctg
ggagccagactgggcctggaggtggtgatgaggcaggtgttgctgggctctgggagctac
cacctgatcgatgacaacctggatcctcttcctgattactggctgtcgcttctctacaag
aagctcgttggaccagaagttttgaacgtttctgattctggcagaaataaaagagtcagg
ctttatctgcactgtgccaacaggaagagttacgccagaggcgccgtggttctgctgtgg
atgaaccttggtaggaagctagcgcggatctcccttcctgacctgatcgccaacagcaca
gtggacacttttgttctccagtcagaccagctgggggaggaaggactggagtccaggtct
gtgcagctgaatggagtcctgttgaagatggtggacgataaaactctccccgatcttagc
ggtgctcggctacctgcagctggacatgtgaagcttcctgcgtactccctggggttcttc
gttttcctggaggcgcgggcctcggcctgcagctga
DBGET
integrated database retrieval system
