Cyprinodon variegatus (sheepshead minnow): 107100936
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Entry
107100936 CDS
T06110
Name
(RefSeq) tetratricopeptide repeat protein 28-like
KO
K24936
tetratricopeptide repeat protein 28
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cvg03037
]
107100936
Cilium and associated proteins [BR:
cvg03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
107100936
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
TPR_7
TPR_1
CHAT
TPR_8
TPR_2
TPR_10
TPR_MalT
TPR_16
RPN7
Rapsyn_N
TPR_14
TPR_6
TPR_NPHP3
PUB
TPR_9
TPR_19
HlyE
ANAPC5
DUF4698
AP4E_app_platf
Wzy_C_2
Motif
Other DBs
NCBI-GeneID:
107100936
NCBI-ProteinID:
XP_015255116
Ensembl:
ENSCVAG00000023222
LinkDB
All DBs
Position
Unknown
AA seq
2378 aa
AA seq
DB search
MMKWQPRKKAYFRQGVALQYLGRHADALAAFASGLAQDPKSLQLLVGMVEAAMKSPLRDS
LEPTYQQLQKMKLDKSPFVVVSVIGQELLTAGHHTASVVVLEAALKIGTCSLKLRGSVFS
ALSSAHWSLGNTEKSLGYMQQDLEVAKTLGDQTGECRAHGNLGSAFFSKGNYREALTNHR
NQLVLAMKLKDREAASMALSSLGHVYTAIGDYPNALASHKQCVLLAKQSKDQLSEARELG
NMGAVYIAMGDFDNAVQCHEQHLGIAKALENKREEARAYSNLGSAYHYHRNFDKAMSYHT
HVLELAQELEEKSIEMRAYAGLGHAARCMQDLERAKQYHEQQLSIAEGLKDRAAEGRASS
NLGIIHQMKGDYETALKLHKTHLAIAQELNDYAAQGRAYGNMGNAYNALGAFDQAVRYHR
QELQISMEVNDRASQASTHGNLAVAYQALGAHDRALQHYQNHLNIARELRDVQSEARALG
NLGNFHCSRGEFPQAVPYYEQYLRLSPELQDMESEGKVCHNLGYAHYCLGNYQDAVKYYE
QDLALAKDLHDKLSQAKAYCNLGLAFKALGDFTKAEECQKYLLSLAQSLNNAQARFRALG
NLGDIFVCKKDVTGAIQFYEQQLALAHQVKERRMEACAYAALGATYRLVQKYDKALGYHT
QELEVYQELGDISGECKAHGHLAAVYMALGKYAMAFKSYEEQLELGRRLKDPVVEAQVYG
NMGITKMNVGVMEEAIGYLEQQLATLQQLSGNEAVMDRGRAYGNLGDCYEALGDFEEAIK
YYDQYLSVAQSLNRMQDQEKAYRGLGNGHRAMGNLQQSLVCFEKRLVVAHELGECGGKAQ
AYGELGALHSQLGNYEQAISCLERQLAIARETQDRLLEGDASCGLGAVYQSMGEYETALR
CHQSDLEIAEEAGSTTRQARAYGNLGLTYESLGNYERAVVFQEQHLSVAAQTNDLAAKTL
AYGSLGRTHHALQNYSQAVMYLQEGLRLAEQLARREDEAKIRHRLGLSLWASGNLEEAQH
QLYRASALFETIRHEAQHSTDYKLSLFDLQTSCYQALQRVLVSLGHHDEALAVAERGRTR
AFADLLVERQTGQQDSDPYTPVTVEHILDTVNSQRALVLYFSMAAGYLYSWLLAPGAGIL
KFHEVYLGEGVSEGGSDFQDGGSGGMVSGSSLEQHIASAREALGVESYYSRGCSSSETES
EAGDFLDQQFEELNNKLNSVTDPTGFLRMVSRNNLFNRSCQSMTSLFSNTMSPAKDGNSS
LPRRSTNLGKPPLRALYDLLIAPMEGGLMHSSGPVGRHRQLVMVLEGELYLIPFALLKGS
SSNEYLYERFSLIAVPSIHGLGFSAKTHSRRSGPAPCGGVSMAAVVGNPRLPSPVMDRWL
WGPMPTAEEEALMVAELLGCQPLTGSSATKERVMGTLTQAECAHFATHISWKLAALVLTP
NPECVPGGSGSTVGVGTIGRGASGRRGSGSRGRKGSVGSGYTIPESLSMQDDNSDVESIC
DSPPLQEFLLTAADILDLRLPVKLVVLGSYQESSSKVTADGVVGLTRAFLAAGAQCVLVS
LWPVPVAASKVFVHAFYSALLNGTKASAALADAMKTVQSSKQYSHPSNWAGYMLIGNDVK
LNSPSSLIGQALAEILQYPDRARDALRVLLHLVEKSLQRIQNGQRNSMYTSQQSVENKVG
GVPGWQALLTAVGFRLDSAGTGLPAAVFFPTADPGDRLQQCSTTLQSLLGLPPPALQSLC
KLITASEAGEQLINRAVKNMVAMLHQVLVQLQTGEKEQDFSLLPIQVSISVQLWRLPGCH
EFLAALGFDLCEVGQEEVVLKTGKLANRRTLHFALQSLLALFDSTELPKRLSLDSSSSLE
SLASAQSVSNPLPVGYSSLPFSPPCLDNQASDAISVYSLSSVTSSMSFASKSDCDFLSHR
QRGGATAHYTVHKHPHVPRSRSSPHGAAAAGAGTRGDDEEYEGFSIISSEPLGSHCDSLP
LPPGHSQRHHRGGRGVGGSTGAGRGYTVSVSSRGSVSTPTSPVKTSLVPSPNSPFQKVGK
VSSSDTGESDQSSTETDSTVKSQEEKPIHLDPQELAQKILEETHSHLRAVSSLQRAGADG
GNSPAATSGRSGAFRSSETSAFSRPNSSASGRVQSSPKPKPPSRSSSLQKVSSGYNSPAV
SEFSQKDGSHPSPTLDSHAQFKLKYPSSPYSGHISRSPSNVSPSSGHQSPADSAPSPALS
YSSTGSACSTSADAPDLDRLRRGVIDEKVQAIHNLKTFWTNAAGQQQQHLGPIKAIHSNS
GPIAPANRDVLSLLNLSPRHCSPHDPQDSLELRELGLQSLDSGTKNSSNGHHCSNPRKVA
PSPTISTSSSPGARPIRLPAGNGYKFLSPGRFFPSSKC
NT seq
7137 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaatggcagccccggaagaaggcatacttccgacagggtgttgcccttcagtac
cttggtcgccatgcagatgcactggccgccttcgcctctgggctggctcaggaccccaag
agccttcagctgcttgtggggatggtcgaagccgccatgaagtctccgctacgagattct
ctagagcccacatatcagcagcttcaaaagatgaagctggacaaaagtcccttcgtggtg
gtgtctgtgattggccaggagctactgacagcaggccaccacacggcttcggtggtggtg
ctcgaagccgccttgaagattgggacgtgcagcctgaagttacgcggctccgttttctcc
gccctcagcagcgcccactggtccctgggcaacacagagaaaagccttggatacatgcag
caagacttggaggtggccaagaccttaggtgaccaaactggggaatgccgtgctcatggg
aatctgggctctgcattcttctccaaggggaactaccgtgaagcattgaccaaccatcgc
aaccagctggttctggccatgaagttaaaggacagagaagctgcttcgatggcgctaagc
agcttgggccatgtatatacagcaataggagactatcccaacgccctcgccagccacaag
cagtgcgttctgctggccaagcaatccaaggatcagctgtctgaggcccgtgagctagga
aacatgggagccgtctacatcgccatgggagactttgataatgctgttcaatgtcatgag
cagcatttagggattgctaaggccctggaaaacaaaagagaagaggcccgcgcttacagt
aacctaggcagcgcctaccactaccatcgtaactttgacaaggccatgtcctaccacact
catgtcctggagcttgcccaggagctggaggaaaagtccatcgagatgagggcctacgca
gggttgggtcacgccgcccgctgtatgcaagacttggagagggccaagcagtaccatgaa
cagcagctgtcaatcgctgagggactaaaggacagggctgcagagggaagggcgtcctcc
aatttaggcatcattcaccagatgaagggggactatgagactgcactgaagctacataaa
acacacctggccattgctcaggagctgaatgactatgctgcccagggcagggcgtatggc
aacatgggcaatgcctacaatgctcttggagcctttgaccaagcagttcgttatcaccga
caggagctgcaaatctcaatggaggtcaatgaccgtgcctcccaggcctccacccatggc
aacttggctgtggcataccaagcccttggggctcatgaccgtgctctacagcattaccag
aatcacctcaacattgctcgagagctccgagatgtccagagtgaagcaagggctcttgga
aacctgggaaacttccactgctctcgaggagagtttcctcaagctgtgccctactatgag
cagtacctcagactttcccctgaactccaggacatggagagtgaagggaaagtttgccac
aatctgggatacgctcactactgcctgggaaactaccaagatgccgtcaaatactatgag
caggatcttgctttggccaaggaccttcatgacaaactgagccaagccaaggcttattgt
aaccttggtttggcttttaaggccttgggagactttactaaggcagaggaatgtcagaag
tatcttctatcactagcacagtccctgaacaatgcacaggctcgctttagagctctaggg
aacttaggagacatattcgtctgtaaaaaagacgtgacgggggccattcagttttatgag
cagcaactggccttagctcaccaggtcaaggaacgcagaatggaggcctgtgcatatgct
gcccttggggcaacctaccgactggtgcagaagtatgacaaagctttgggctaccacacc
caggaacttgaagtatatcaagagctcggcgacatctcaggagagtgcaaagcccatggc
cacctggcagccgtgtacatggccctggggaagtatgccatggcctttaagagctacgag
gagcagttagagcttggacgcaggttgaaagatcccgtcgtggaggcacaggtttatgga
aacatgggcatcacaaaaatgaatgtaggggtgatggaggaagctatcggctacctggag
cagcagctagctactttgcagcagctgagtggaaatgaagcagtaatggaccggggcagg
gcctatggaaaccttggagactgctatgaggctttgggagactttgaggaagccatcaaa
tattatgatcagtacttgtcagtggcacagagccttaatcgcatgcaggaccaagagaaa
gcctacagaggcctgggtaatgggcacagggcaatgggcaatctacagcagtcgctggtg
tgtttcgaaaaacgactagttgtggcacatgaattgggggagtgtggaggcaaggcccag
gcctacggcgagctaggcgcgctccacagccaattaggcaactacgagcaggccatttcc
tgcctggaacgtcagctggccatcgcacgtgaaacccaggacagactcctggagggtgat
gccagctgcggcttgggggcagtgtaccaatccatgggagagtatgaaacggccctgcga
tgccaccaaagcgacctggagattgcagaagaagcaggcagtaccacacgtcaggcccgg
gcctatggcaacttgggccttacctatgagtcactcggcaattatgagcgagcagtggtt
ttccaagaacagcacctaagtgtggcggctcagactaatgacctggctgccaagacactg
gcctatgggagcctggggcgaacacatcatgcactgcagaactactcacaagctgtcatg
tacctgcaggaaggcctgcggctcgccgagcagctggctcggcgcgaggatgaggcgaag
atccgccatcgtcttggactctccctgtgggccagtgggaatttggaggaggcccaacat
cagctctaccgggcatctgcactgttcgagaccatccgccacgaggcccagcacagcacc
gactataaactctccctgtttgacctgcaaacctcctgttaccaggctctccaaagagtc
cttgtcagcctaggccaccatgacgaagcccttgctgtggccgagcggggtcgcacacga
gccttcgctgatctcttggtggagcgacagacaggtcaacaggactcggacccctacaca
cccgtaacagtcgagcatatcttggacacagtcaacagtcagagagctttggtgctgtat
ttctcaatggcagcaggttatttgtacagctggcttctggctccaggggcaggaatcctg
aagtttcatgaagtttacctcggtgagggtgtgtcggaaggggggtcagacttccaggac
gggggtagtggtgggatggttagcggctcttcgctggagcagcacattgcgagcgctcgg
gaggccctgggagtggaatcctactacagcaggggttgctcgagcagcgagacagagagc
gaggcgggagactttctggaccaacagtttgaagaactcaacaacaagctcaactctgtt
accgacccaacaggcttccttcgcatggtgtccagaaacaacctgttcaacaggagctgc
cagagcatgaccagcctcttcagtaacaccatgtctcctgccaaagatggtaactcttcc
ctgcctcgacgctccacaaaccttggcaaacctccactgcgggcactttacgatttactc
atcgcacctatggaggggggtctgatgcactccagcgggcctgttggcagacatagacag
ctggtgatggtcctggagggagagctgtacctcatcccgtttgctctgctgaaaggaagc
tcctctaatgaatacctgtatgagcgtttcagcctcatcgctgtgccctccatccatggc
cttggattcagtgcaaagactcactcgcggcgttctggaccagctccgtgtggtggcgta
tccatggcagcagtggttggaaatcctagactgccttcacctgtgatggaccgctggctt
tggggacccatgcccaccgctgaggaagaagctcttatggttgcagagctgctggggtgt
caacctcttactggttcatctgccactaaggagagggtgatgggaaccctcacgcaggct
gagtgtgctcattttgccacccacatttcttggaaactggctgctctggtgcttacccca
aacccagaatgtgtacctggcgggtcaggatccactgttggggtgggaacgataggcaga
ggagcgagtggaaggagaggcagcggcagtcgagggaggaagggctctgttggcagcggc
tacaccatcccagagtctctcagcatgcaggatgacaacagcgatgtggagagtatctgt
gacagtccgcccctgcaggagtttctgctgacagcggcagacatcttggacctgaggctg
cctgtcaagctggtagtgctggggtcgtaccaagagtctagcagcaaggtgacagcagat
ggtgttgtgggactaaccagagccttcctggctgctggtgctcagtgtgttctggtgtcc
ctgtggcctgtacctgttgcggcctccaaggtttttgtccacgcgttctattctgctctg
ctgaatgggaccaaggctagtgcagctcttgcagatgccatgaagactgtgcagagcagc
aagcagtattctcatccctccaactgggcaggatatatgctaattggcaatgatgtgaag
ctaaacagcccatcttcccttattggccaagccttggctgagattttgcagtatcccgat
cgagctcgcgatgctctgagagttttacttcatctggtggagaaatctcttcagaggata
cagaacggccagcgtaattccatgtatacatcacagcagagcgtggagaacaaggtcggt
ggggtccctggatggcaggccctgctgacagctgtgggcttccgtctcgactctgcaggc
accggtcttcctgctgcagttttctttcccactgctgacccaggagacaggctccagcag
tgcagcactacgctacaatcactgctcggtctgccgcctccagctctccagtctttgtgc
aaactcatcacagcttcagaggcaggagagcagctcatcaaccgggctgttaaaaatatg
gtggccatgctgcaccaggtgctagtccaactccagacaggagagaaagagcaggacttt
tccctcctgcccatccaggtgtccattagtgttcagctctggagattgcctggatgccat
gaatttctggctgctcttggattcgatttatgtgaggtaggacaagaagaagtggtgcta
aagacgggcaagctggctaaccgccgcaccttgcactttgctctccagtctctgctggcg
ctgtttgactctacagaactgcccaagcgcctgagcctggacagctcatcttcccttgag
tctttagcttctgctcagtctgtctccaacccattgccagtgggatactctagccttccc
ttctctccaccttgcctggacaatcaagcatcagatgccatctctgtctacagcctcagc
tctgtaacatcttcgatgagttttgcctctaagtcagactgtgatttccttagtcatcga
caacgaggtggcgccactgcacactacactgttcacaaacacccacatgttccacgcagt
cgctcttctccgcatggtgcggctgctgcaggagcaggaacaagaggcgatgatgaggaa
tatgaagggttctccatcatcagcagcgagccactgggaagccattgtgactctctgcca
ttaccaccaggccacagtcagagacaccacagaggaggcagaggggttggaggctccacg
ggagcagggagaggctacacggtctcagtgtcatcacgggggagtgtcagcaccccaacg
tctcctgtgaaaacctctcttgttcccagcccaaactcaccgttccagaaggttggtaag
gtgagcagctcagatacaggcgaatctgaccagtctagtactgagacagacagtactgtc
aagtctcaggaagagaaaccaattcaccttgatccgcaagaacttgcccagaagattctg
gaggaaactcacagccacttacgagccgtgagcagccttcagcgggctggagcagatggt
ggaaatagtccagctgcgacctcaggtcggagcggcgcgttccgctcttctgaaactagt
gcattcagccgccctaacagcagcgccagtggtcgagttcagtcctccccaaaacccaag
cccccctcccgttcttcttccctacaaaaggttagctctggatacaacagccctgcggtc
tctgagttttcccaaaaagacggtagccatccttcacccaccttggacagccacgctcag
ttcaaactgaagtacccaagctctccttacagcggccacatctcccgttctccgagtaat
gtgtcccccagctctggacaccagtcgccagctgacagtgctccatctcctgcactgtcc
tactcctccacaggatctgcctgttctacatcagcagatgcaccagacctcgataggcta
agaagaggggtcatcgatgaaaaagtccaagctatccacaacctgaaaacattctggact
aatgctgcaggtcaacagcagcagcatctaggtcctattaaagccatccacagcaactcc
gggcctattgctcctgccaatagagatgtactgagccttctgaacctttccccacggcac
tgctcccctcatgacccccaagacagcctggagctgcgggagctgggactgcagtcactg
gatagcggtaccaagaattcttccaatggacaccactgttccaacccaagaaaagttgcc
ccttcgccaacaatttccacaagcagtagccctggtgctcgtcctatccgattgcctgcc
ggcaacggatataagttcctctcgccaggaagatttttcccttcttccaaatgctga
DBGET
integrated database retrieval system
