Cyprinodon variegatus (sheepshead minnow): 107100986
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Entry
107100986 CDS
T06110
Name
(RefSeq) protocadherin-10-like
KO
K16499
protocadherin delta 2
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cvg04515
]
107100986
Cell adhesion molecules [BR:
cvg04515
]
Cadherins
Protocadherins
107100986
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
107100986
NCBI-ProteinID:
XP_015255193
Ensembl:
ENSCVAG00000022026
LinkDB
All DBs
Position
Unknown
AA seq
977 aa
AA seq
DB search
MFLLLFYSSALFSAMIVLLIALCFTDGALSQIRYSVPEEAEHGTLVGNIAEDLGIDLTKV
ASRRFQVVPSSRTPYLEVNLENGVLFVNEKIDREQICKQSSSCQLNMEVFLENPLELFRV
EIEVVDINDNPPSFSETDITVEISESATPGTRFPLESAFDPDVGSNALRTYDITTNNYFY
LDVQTQTDGNKFAELVLEKPLDREQQAAHRYVLTAVDGGQPPRTGTALLVVKVLDSNDNV
PVFDQPVYTVNLSENVPVGTLVIQLNATDLDEGLNGEIVYSFSNHISSRVKELFSIDART
GRIEVRGEVDYEESNLYQIFVQGKDLGPNAVPAHCKVLVKVADVNDNAPEITFSTVTESV
SEIAAPGTVIALLSVTDRDAGENGQIQVEILGDVPFKLKSSFRNYFTIVTDGLLNREQAD
SYSVTVVAKDMGTPSLASSKSISVQVSDENDNAPTFTLSLYDVYVTENNVPGAYIHAVTA
LDPDIGQNALISYSILECEIQGMSVKTYVSINEETGYLYALRSFDYEQLKEFAFIVGAKD
SGAPELGSNATVRVIIVDQNDNAPIVLAPLGKNGTAREHLPRSAEPGYLVTRVMAMDADD
GENARLSYSIQRGNENGMFRMDWRTGELRTARRVSAKRDTHHQYDLVIEVRDHGQPPLSS
STSVLVLLVDSMSEGRGMGDKLGTSKAKDGALDLTLILIIALGSVSFIFLLVMIVLAVRC
QKDKKLNIYTCLTSDCCLGCSSCCSRQARSRKKKLSKADIMLVQSTVNVSGPGTAQVPVE
ESGSFGSHHQNQNYCYQVCLTPESAKTDLMFLKPCSPSRSTDTDHNPCGAIVSGYTDQQP
DIISNGSILSNETKHQRAELSYLVERPRRVNSSAFQEADLVSSKDSGHGDSEQGDSDHDA
TNRGHSSGADLFSNCTEECKALGHSDRCWMPSFVPSDGRQALDYRSNLHVPGMDSVPDTE
RGRGFSSSFRVDIPETA
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atgtttttgctcctattttactcaagtgcacttttctcggccatgattgtgcttttgatc
gctctgtgctttactgatggagcgctctctcagatccgctactccgtcccggaggaggca
gagcatggcaccctggtggggaacatcgccgaagacctggggattgacctcaccaaagtg
gcctcgaggcgcttccaggttgtacccagctctcggacgccatacctggaggtcaatctg
gagaacggcgtccttttcgttaacgagaaaattgaccgggagcaaatctgcaagcagagt
tccagctgccaacttaatatggaggtgtttttggaaaacccactagagctgttcagggtg
gagatcgaggtagtggacataaacgacaatccaccaagcttctcggagacagacatcacg
gtagagatctcggaaagcgcaactccgggcacccggtttcctttggagagcgctttcgac
ccggacgtcgggtccaacgcgttgcgcacttatgatatcacaaccaacaactacttttac
ctggatgttcagactcagacggacggaaataagtttgcagagcttgtcctggagaagccg
ttggacagggagcagcaggcggcgcaccggtacgtgctaactgcggtggacggcggacag
ccgccccggaccggcactgcgctgctggtggtcaaagttttggactctaacgataacgtg
cccgtgttcgatcagcccgtctacacggtgaatctctcagagaacgtaccggtaggcact
ctggtgatccagctgaacgcaacggacctagatgagggcctgaacggggagattgtttac
tctttcagcaaccatatttccagccgcgtaaaggagctgttcagtatagatgcgcggacc
gggcggatcgaggtccgcggggaggtggattatgaggagagcaacctctatcagatcttt
gtgcagggaaaggatttggggccaaacgccgtgcccgcgcactgcaaagtgttggtcaag
gtggccgacgtgaacgacaacgcgccggaaatcaccttcagcaccgttacagagtcagtc
agcgaaatagccgctcccggtacagtcatagctctgctgagtgtgacggaccgggacgca
ggggaaaatgggcaaattcaggtagaaattctcggtgatgtcccgtttaaactgaaatcc
tccttcaggaattacttcaccatagtgaccgacgggctcctgaaccgggagcaggcggac
tcctactccgtaactgtggttgccaaggatatggggactccttctcttgcttccagtaag
tccattagcgtccaggtttcagatgaaaatgacaatgcgcccacttttacactatccctt
tacgatgtatatgtgacagagaataacgtaccaggggcctacatccacgctgtgacggcc
ctggaccccgacatagggcagaatgccctcatcagttactccatactagaatgtgaaatt
cagggcatgtcagttaaaacctacgtgtccatcaatgaagagacagggtacctttacgca
ctcaggtcttttgattatgagcagctgaaagaattcgcctttattgtcggagccaaggac
tccggagcccccgagcttggctccaacgcaaccgtcagagtcataattgttgatcagaat
gacaatgcgcccatagtgcttgctcccctgggaaaaaacggaacagccagggagcacctt
ccccgttctgctgagccaggttacctggtgacccgtgtcatggcaatggatgcagatgac
ggtgagaacgcacgcttgtcctacagcattcagagagggaacgagaacgggatgtttagg
atggactggaggactggtgagctcaggacagcaaggcgggtgtcagctaagcgtgacaca
caccaccagtatgacctggtgattgaagtgagagaccatggtcagcctccattgtcctcc
agcaccagtgtactggtgttactggtagacagcatgtctgaaggccggggcatgggagac
aaactgggcaccagcaaggccaaggatggtgccttggacctcactctcatcctcatcatt
gccctcggctctgtctccttcatcttcctccttgtcatgattgtgttggctgtgcgctgc
caaaaggacaaaaagctcaacatttacacctgcctaaccagcgactgctgcctaggatgc
agctcctgctgctcaaggcaggctcgatcacgcaagaaaaaactaagcaaggctgatatc
atgcttgtgcaaagtactgttaatgtcagcgggcctggaacggctcaagtccctgtggag
gagtctggaagctttggctcccaccaccaaaaccaaaactattgctaccaggtctgtctg
actccagagtcagccaaaactgacctcatgttcctaaagccctgtagtccatctaggagc
acagacaccgaccacaacccttgtggggccatagtgtcagggtacacagaccagcagcct
gacatcatatcaaatggcagcattttatcaaatgagaccaaacaccagagagctgaactc
agctacctggtggagaggccgaggcgagtcaacagctcagcctttcaggaggcagatctg
gtcagctctaaagatagtggccacggggacagcgagcagggagacagtgaccacgatgct
acaaatcgaggccattcctcaggtgcggacctgttttctaactgcactgaggagtgtaag
gccctggggcactctgatcgctgctggatgcctagctttgtgccctctgacgggcgtcag
gctctagactaccgcagcaaccttcatgtccccggcatggactcagtccctgatacagag
cgaggaagagggttttctagctcgttccgtgtggacataccagagactgcgtga
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