Cyprinodon variegatus (sheepshead minnow): 107101035
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Entry
107101035 CDS
T06110
Name
(RefSeq) myoferlin-like
KO
K22125
myoferlin
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvg04131
]
107101035
Membrane trafficking [BR:
cvg04131
]
Endosome - Lysosome transport
Others
Ferlins
107101035
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2
dsrm_Ferlin
FerB
FerA
FerI
Pex24p
PI3K_C2
Motif
Other DBs
NCBI-GeneID:
107101035
NCBI-ProteinID:
XP_015255274
LinkDB
All DBs
Position
Unknown
AA seq
1813 aa
AA seq
DB search
MFPTPGAASGNHFLPDEKKKTKSIDSEVNPVWNEVLEFDLKGVPLDSGSQLDIVVKDRET
IGKDKFLGSTKIPLRDLASGKARSLPSKNVPLVDESGQRIGATIDLVVAYDPPANAVPNP
NDPQDGNAMAAEGGDGGGDEEAGETVADGGQSGPAGVPSSSGQAAGFRQRLTRAQSQRRL
VNKPQDFQIRVRVIEARQLSGNNIKPVVKVHVCGQTHRTRIKKGNNPFFDEMMFYNVHML
PSDLFEQNISFRVYNSYSLRADSLMGEFLLDVGYVYDEPGHCVMRKWLLLNDPDDCSSGA
KGYIKVSIFVVGTGDEPPVEKRDSNDDQDDIESNLLLPAGVTLRWATLLLKVFRAEDIPQ
MDDAFVQTLKGIFGGEENKKNLVDPFLEARFAGKKLCTQIIEKNANPEWNQVLNLQVKFP
SMCERIKLTVFDWDRLTGNDAVGTTYLNLTQIASSGGEVEEEHAENGEMPSSKADSGESE
VGFLPVFGPCYVNLYGSPREFTGLPDPYEALNFGEGEGVAYRGRVLVELSTKLEGKADKT
VDGIHSDDILVVQKYQRRRKYCLCAVFHSATMIQEPGEPIQFEVSIGNYGNKLDTTCKPL
ASTTQYSCAVFDGNHYYYLPWVNTKPVVVLTSFWEDISHRLDSVNIILYITQHLQSNLDA
FKIAILAKVSDNQLAEVWMKLLNQLIEDLDRFPTPELEGRSNLTTLDIQIKKLRDSALSS
ILNAARRMREEAREIADTLPEIEAWLDKLNQLAKEPQNSMPDVIIWMLRGQKRVAYSRIP
AHQILYSTYSTEACGQHCGKTQTIFLKYPMDKTKGSKVPVQVRVNMWLGLSTHEKKFNGF
SEGTFSVFAELYENQAQVFGNWGTTGLVGRYKFSDVTGKLKLKKEYFLPPRGWEWESDWF
IDPEKALLTEADAGHTEFMDEVFQNETRFPGGEWKPASEPYTDVNGEKSRNPTEFDCPPG
WTWEDSWTVDINRAVDDQGWEYGVTIPPDDKPRSWVPAEKMYHVHRRRRLVRPRKRAARP
AGAAVEKRDHGDPEGWEFSSLIGWKFHRIERSSDTFRRRRWRRKMAPEDRLGACAIFQLE
GALGIDTEDKEKGSKADATKMFGANTPTVSCSFDKSYMYHLRVYLYQARNLSSMDKDSFS
DPYAHVSFLYVSKTTEKLKATLNPTWDQTLIFNDVEIYGDPKNMVHSPPEVVLEFYDSDQ
VVGSESCESELPLVPPKRAENLYMVPQGIRPVVQLTAVEILAWGLRNMKTYQLAAVSSPS
LVVECGGQRVESAVIKNMKKSPNFPGSVLFIKVLLPKDEMYTPPIVLKVIDHRPFGRKPV
VGQCTITSLEQFRCDPYVIVSEGARASKMALMMTAPRKDVSITMEEARPLLEAQFLYSMS
AAFNKMASPAFQFQAEKEKETVDWWSKFYASVGDQQKCGPYIRKGYDTLKVYDCELETVP
EFKGLTDFCNTFKLQRGKNENGDEDPTVVGEFKGAFKVYPLSDDPGVAPPPRQFRELPES
GPQECLVRIYVVRAIDLQPKDNNGRCDPYIKISVGRNTLDDRDNYLPNNINPVFGRMFEM
TCFLPQDKDLRIGVYDYDLLTRDEKVGETVIDLENRFLSRYNSYCGLPQTYCVSGINQWR
DQLKPSQILENLARLKGLSKPKTEDNGTSLTFNGKEYTLAQFEGNTEVHQHLGPPRERLC
LHVLRTQGLVPEHVETRTLYSSFQPNLSQGRLQMWVDVFPKSMGQPGPPFDITPRKPKRH
FLRVVIWNTTDVTLDETSITGENMSDIYVKGYIYLLFFKKEATLQFKPYCEFNLIQKRSM
LYIYAPKSSNSRC
NT seq
5442 nt
NT seq
+upstream
nt +downstream
nt
atgtttcccacacctggtgctgcatccggaaatcattttcttccagatgagaagaagaaa
accaaatccattgacagcgaggtgaaccctgtctggaatgaggttcttgagtttgatcta
aaaggtgttcccctggactctggctcccagctagacattgttgtgaaagaccgggagacg
attgggaaagataaatttcttgggtccactaaaattcctctaagagaccttgcctctggg
aaagcaagatctctgccgtccaaaaatgttcctctcgttgatgaaagtggacaacgtatt
ggggctacaatagatctggtggttgcttatgaccctccagccaatgctgttccaaacccc
aacgaccctcaagatggaaatgcaatggcagctgaaggtggagatggtggtggggatgaa
gaggcgggtgagactgtcgcagacgggggccagagtggcccagcaggagtcccctcatcc
tctgggcaggctgctggttttcgccagaggctgacccgggcacagagtcaacgcagacta
gtaaacaaacctcaggacttccagatccgtgttcgggtcatcgaagcccgccagttgtct
ggaaacaacatcaaacctgtggtgaaggttcatgtgtgtggacagacccacaggaccagg
atcaagaagggaaacaatccattctttgatgagatgatgttctacaacgttcacatgctg
ccatcagatttgtttgagcagaacatcagtttccgggtctataattcctattcactgagg
gcagacagcctgatgggagaattcctgctcgatgttggttatgtttatgatgaaccaggc
cactgtgtgatgagaaaatggctcctgctgaatgacccagatgactgcagctctggggct
aaaggctacatcaaagtcagcatctttgttgtaggaacaggagacgagcctccagtggag
aaaagagactctaatgatgaccaggatgacatagagagcaatctgctgctgccagcagga
gtaactctgcgatgggccaccctgttattaaaggtgttcagggctgaagacattccccag
atggatgatgcatttgtccagacattgaaagggatctttggaggagaggaaaacaagaag
aacctggtggatccttttctagaggctcggtttgctggaaaaaagttgtgcactcagatc
attgagaagaatgcaaacccagagtggaaccaggttttgaaccttcaagtcaaattccct
tccatgtgtgagcgtatcaagctgaccgtgtttgactgggatcgtctgacgggaaatgat
gctgttggcaccacatacctgaacctgacccagatagcttcctctggtggagaagtagaa
gaagaacatgcagaaaatggggaaatgccatcctctaaagctgactctggagaatcagag
gtgggcttccttcctgtatttgggccctgctacgtcaacctctacggcagtcccagggaa
ttcacgggcctcccagacccctatgaggctcttaattttggcgagggtgaaggagtggct
tacaggggcagagtactagtggagctctccactaagctggaggggaaagcggataaaact
gttgatggtatccacagcgatgacatccttgtggtgcagaagtaccagaggagaagaaaa
tactgtctgtgcgccgtcttccacagcgccactatgattcaggagcccggtgaacccatc
cagtttgaggtcagcattggtaactatggcaacaaactggacaccacttgtaaacccctg
gcctccaccactcagtacagctgtgctgtgtttgatggtaaccattactactacctgccc
tgggtaaatactaaaccggtggttgtgctcacgtccttctgggaggacataagtcaccgc
ctcgattctgtcaacattatcctctacattacgcaacacctgcaatccaacctggatgca
tttaagatcgctatactggctaaggtctccgacaatcagctggcagaagtgtggatgaag
ttactgaatcagttgattgaagacctggacagattccctacacctgagctggagggccgc
tccaacctaacaactctggacatccaaatcaagaaactgcgagacagcgctctaagctcc
atcttaaacgctgcgagacgaatgagagaggaggccagagaaatcgccgacaccctgcca
gaaatagaggcctggctggacaaactcaatcagctggcaaaggagccccagaacagcatg
cctgatgtgatcatctggatgctgcgggggcagaagagggtcgcctacagtcgtattcct
gctcaccagatcctgtattcgacttacagcacagaggcctgcgggcagcactgtggcaag
actcagaccatttttctaaagtaccccatggacaagaccaaaggctcgaaggtgccagtt
caagttagggtcaacatgtggctcggcctctctacacatgagaaaaagttcaacgggttc
tcagagggaacctttagtgtgtttgctgaactgtatgaaaaccaggctcaagtctttgga
aactgggggaccacaggactggtgggccgctataaattctcagacgtgacggggaaactg
aagctgaagaaggagtacttccttccaccacgaggatgggagtgggagtcggactggttt
atcgatccagaaaaggccctgctaactgaagccgatgcgggacacacggagtttatggat
gaggtcttccagaacgaaacccgttttcctggtggagagtggaagcctgcctcggagccg
tacacagatgtgaatggagagaaaagccgtaaccctacagagtttgactgtcctcctggg
tggacgtgggaggacagctggactgtggacattaacagagctgtggatgatcaaggctgg
gagtatggggtgaccattcctccagatgacaagcctcgatcctgggtccctgctgagaag
atgtaccacgtccaccgcaggaggaggctggttcgacctagaaagagggctgcacgacct
gcaggagcagctgtggagaaaagagatcatggtgacccagagggatgggaattctcctct
ctgattggatggaagttccaccgaattgagcgctcctccgacacgttccgtcgaagacgc
tggaggaggaagatggcgccggaagatcgccttggagcatgtgccatctttcaacttgag
ggtgcattaggtatcgatacagaggataaagagaaaggctccaaagctgatgccaccaag
atgtttggtgccaacactcccactgtgtcctgctcctttgataagtcctacatgtatcac
ctccgcgtctatctctatcaggcgaggaacctgagttctatggacaaggacagtttctct
gatccatatgcacatgtctccttcctttatgttagcaagacaactgaaaaacttaaagca
actctgaacccaacctgggaccaaaccttgatttttaacgatgtggagatttatggagac
cccaagaacatggtccacagtcctcctgaggtggtgctggagttctacgacagcgaccaa
gtggtaggaagtgaaagctgtgagtcggaactccccctggttcccccaaagagagctgag
aacctctacatggttcctcagggtatccgacccgtggttcagctcaccgctgtggagatt
ctggcatggggtctaaggaacatgaagacgtaccagcttgctgcagtgtcttcccccagt
ttggtggtagagtgtgggggccaaagggtggagtctgctgtgatcaagaacatgaaaaag
agtcccaacttccccggctctgtcctcttcattaaagtgcttcttccaaaggatgagatg
tacactcctcctattgtgctgaaggtgatcgaccaccgtccgtttggcaggaagcctgtg
gttggtcagtgcaccatcacgtcactggagcagttcagatgtgacccatatgtcatagtt
tcagagggagccagggcctccaagatggctctgatgatgacggcgccacgtaaagatgtt
tctatcaccatggaagaggcccggccgctgttggaggctcagtttttgtacagtatgtct
gcagctttcaacaaaatggcttccccagctttccagtttcaggcagaaaaggaaaaggaa
acggttgattggtggagtaaattctacgcttcagttggagaccagcagaaatgtggtcct
tacataagaaaaggctacgatacccttaaggtgtatgactgtgagttggagactgtccca
gaattcaaggggctgactgacttttgcaacacgttcaagctgcagagaggcaagaatgaa
aatggggacgaagaccccaccgtggtcggagagttcaagggtgcgttcaaggtgtacccc
ctatcagatgacccaggtgttgctcctccaccccgacagttcagagagctgccggaaagc
ggacctcaggagtgtctggtcaggatttatgtggttcgggcgattgaccttcagcctaaa
gacaacaatggcaggtgcgatccatacataaaaatatcagtgggcaggaacacacttgat
gacagagataattatttgcccaacaacataaaccctgtgtttggaaggatgtttgagatg
acctgcttcttgcctcaagacaaggacctgagaatcggggtttatgactatgatctcttg
actcgagatgagaaggttggcgagacagtgatcgacctagagaaccgcttcctgtctcga
tataactcctactgcggccttcctcagacctactgcgtgtctggcatcaatcagtggcgg
gatcagctgaagccgtcgcaaatcctggagaacctggcccgtctaaaaggcctgtccaaa
cccaagacggaagataatggcacatcacttactttcaacggaaaagagtacacattggcc
cagtttgagggtaacacggaagttcaccagcacttgggtccaccccgagaacgactctgt
ctgcatgtccttcgaacgcagggactggttcctgaacatgtggagaccagaaccctttac
agctccttccagcctaatctgtctcagggtcggctacagatgtgggtggatgtcttccca
aaaagcatgggacagcctggtcctcccttcgacatcacgccccgcaaacctaagaggcat
ttcctgcgagtcgtcatctggaacaccacggatgtaactctagatgaaaccagcatcaca
ggagagaacatgagtgacatctatgtgaaagggtatatatatcttcttttctttaaaaag
gaagcaactttacaattcaaaccttattgtgaatttaatctaatccaaaaacggtcaatg
ttatatatctatgcaccaaaatcttctaatagtagatgttga
DBGET
integrated database retrieval system
