Cyprinodon variegatus (sheepshead minnow): 107101070
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Entry
107101070 CDS
T06110
Name
(RefSeq) zinc finger RNA-binding protein-like isoform X1
KO
K13203
zinc finger RNA-binding protein
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cvg03041
]
107101070
Spliceosome [BR:
cvg03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
107101070
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DZF_C
DZF_N
zf-met
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
107101070
NCBI-ProteinID:
XP_015255317
Ensembl:
ENSCVAG00000022133
UniProt:
A0A3Q2DJG9
LinkDB
All DBs
Position
Unknown
AA seq
1030 aa
AA seq
DB search
MAASNYFGFTHGASPQYSTQPPTAYSHPSTASYSVQQAPAVAHAVTASYSPAPVQAARPV
ATAPYPAYQSHQAPPDYTYRQPDPPQPTTTPQTYQVYSDMQQENYSYVRSAAVTTYDNKQ
YYQTSVAPAQRTPTDNYYQTVSVGVKSSYSPAPSTVYNQPPLAQRQVTALKPLVPSSAVS
TSYNIYPVSTSVQQPPTPISSYTPGSSFSSTVSATSYSGISYSSYDSIGYTSASTPTYYQ
PAQQTLAQPQPPPQQLQQPQPSIQPPPKQLTSSSWSTSGSNMVTTPTLNSYKKPAFHQNK
LQRPKGPPKQSQLHYCDICKISCAGPQTYREHNEGQKHKKKEAALKAGGQSGTTNGPRGV
QTQLRCELCDVSCTGVDAYAAHIRGAKHQKVVKLHTKLGKPIPSTEPVLVNSAPVTTNCI
AGKQTASSSVSSSISTISTPAVTTKQPAVNTTAKITPQTKKPVPIKLTPVSNKPVSAPAA
AAPVTPVVVKVEEPVQHKIPKMEPKTEDDRAGGQGDVQPVGHDYVEEVRNEDGKVIRFHC
KLCECSFNDPNAKDMHLKGRRHRLQYKKKVNPELPVEIKPSNRAKKLQESKLKKQKQKAT
LKRQREDEQRWHMEMRRYEEDMYWRRMEEEQMYWGEQRRRMPPPPPPPLMSRPGMPVPPL
LNCVRRPDSADDRHIMAKHSTIYPVEEELQAVQRIVSHSERALKLVSDSLLEKEEPASTS
PATGGGEGTSAENPARLLKGVMRVGILAKGLLLRGDRNVELVLLTAKKPTISLLKSIAQQ
LPKELSTFSEDQYEVQAHPEEANIVICSSQEPKMQVTISLTSPLMREDTAAEKDKQAEGK
AAEKDVSEKDPLDVLNRKKCLDNLAALRHAKWFQARANGLQSCVIIIRVLRDLCQRVPTW
GRLPAWAMELLVEKVISSATGPLSPGEAMRRVLECISIGILLPDGPGLMDPCEKEPTDAL
KSMKLQAREDVTASAQHALRLLAFRQIHKVLGMESLPASKASARNRKRRRDISDTGEGEG
EGKKDKKEEA
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaagcaactatttcggctttacacatggtgccagtccacagtacagtacccag
ccacccacagcttactcccatccctctactgccagctacagtgtccagcaggctccagct
gtggcccacgctgtaaccgcctcatactccccagctccggtccaggcagcccgaccagtg
gccacagccccttatcctgcctaccagagccaccaggcacctccagattacacctacaga
cagccagatccaccacaacccaccaccactccacagacgtaccaggtatactcagacatg
cagcaggagaactatagctatgtgcgttctgctgcagtaaccacttatgacaacaaacag
tattaccagacaagtgtagcaccagcccagaggacgcccacagataactattaccagacc
gtctcagtaggagtgaaaagctcttacagcccagctccctccactgtgtacaaccagcct
cctctggcccagaggcaggtgaccgctctcaaacctctggttccctccagtgctgtgtca
accagctacaacatctacccagtgtccactagtgtccaacagcccccaacacccatttca
tcatacacgccgggctcctctttcagctccactgtttctgctacctcttattcaggtatc
agctactccagttacgattctattggctatacctctgcatccacccccacctattaccag
cctgctcagcagactttggctcaaccccagcctccaccacagcagcttcagcagccccag
ccctccattcagccgccaccaaaacagctgactagttcctcttggagtacctcagggagc
aacatggtgacaactccgaccttaaactcctacaaaaagccggccttccaccagaataaa
ttgcaaaggcccaaagggcctccaaagcagtctcagcttcattactgtgacatttgcaag
atcagctgtgcaggccctcagacgtaccgagaacacaatgagggccaaaaacataaaaaa
aaggaggcagccctgaaggcaggggggcagtctgggaccaccaatgggcccagaggagtc
cagacccagttacgatgcgaactgtgtgatgtttcatgcactggggttgatgcctatgct
gctcacatccggggggcaaaacaccagaaggtggttaaacttcacactaaacttggcaaa
ccaatcccttccactgagccggtgttggtgaattctgccccagttacaacaaactgcata
gctgggaaacaaacagcatcatcctctgtgtcgtcctcgatttcaaccatttccacccca
gctgtaacaaccaaacagccagctgtaaacactacggccaaaataacaccacagaccaag
aaaccagttcccatcaagttaactcccgtttccaataagccagtcagtgctcctgctgca
gctgctcctgtaacacctgtggtagttaaagtggaggagcctgttcagcacaaaattccg
aagatggagccaaagactgaagatgaccgagctggaggccagggtgacgtccagcctgtg
ggacatgactatgtagaggaggtacgtaacgaggatggaaaggtgattcgatttcactgt
aaactatgtgaatgcagcttcaatgaccccaatgctaaagacatgcacctaaagggacga
aggcacagactgcaatacaagaaaaaagtcaacccagagcttcctgtggagattaagcct
agcaatcgagccaagaagcttcaagagagcaagctgaagaagcagaagcagaaggccacg
ctgaaaagacagagagaggatgagcagcgctggcacatggagatgagacggtatgaggag
gacatgtactggagaaggatggaagaggagcagatgtactggggagagcagagacgcagg
atgccacccccacctcctccacctcttatgagtcgtcccggtatgccagttccccctcta
ctgaattgtgttcgccgccctgattctgccgatgatcgtcacatcatggcaaagcattcg
actatttacccagtggaagaggagctgcaagctgttcagaggatcgtctcccattccgag
cgagctcttaaactggtgtcagactccctgcttgagaaggaggaaccagcttccacctcc
cctgctactgggggaggagaaggaacgagcgctgagaaccccgcacggctgctcaaaggc
gtgatgagagtggggatcctagccaaaggacttctgcttcgaggggacaggaatgtggag
ctcgtactgcttactgctaagaaacccaccatctcgttactaaagagcatcgcccagcag
ctgccaaaggaactatcaacattttctgaagatcagtatgaggtgcaggctcatcccgag
gaggcgaacatcgtgatatgttcaagccaggagcccaaaatgcaggtgaccatttctctc
acctcgccgctgatgagggaggacactgctgctgagaaggacaagcaggcagaaggaaaa
gcggctgagaaagatgtgtctgagaaagaccctctggacgttttaaatcggaaaaaatgt
ttggacaacctggctgctctccgacatgccaaatggtttcaggctcgtgcaaatggatta
cagtcatgtgtgatcatcattcgggtgctgagagatttgtgtcagcgtgttcctacctgg
gggaggctgcctgcctgggcaatggagctgctggtagagaaggtgatcagcagtgccaca
ggcccgcttagtccaggggaggccatgcgccgggtcctggagtgcatctccatcggcatc
ctgcttccagatggcccaggtttgatggacccctgtgagaaggagccaacagatgctttg
aagagcatgaagcttcaagcccgggaggatgtaactgccagcgcacagcatgctttgcga
ctccttgctttccgccagattcacaaggttttgggcatggagtcccttccagcatctaag
gccagcgcacgcaaccgcaaacggcgacgggacatcagtgacacgggcgaaggagagggg
gagggcaagaaagacaagaaagaggaagcttga
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integrated database retrieval system
