Cyprinodon variegatus (sheepshead minnow): 107101133
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Entry
107101133 CDS
T06110
Symbol
smarcd1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107101133 (smarcd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cvg03021
]
107101133 (smarcd1)
03036 Chromosome and associated proteins [BR:
cvg03036
]
107101133 (smarcd1)
Transcription machinery [BR:
cvg03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
107101133 (smarcd1)
Chromosome and associated proteins [BR:
cvg03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
107101133 (smarcd1)
PBAF complex
107101133 (smarcd1)
GBAF(ncBAF) complex
107101133 (smarcd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
SWIB_eIF2D
Motif
Other DBs
NCBI-GeneID:
107101133
NCBI-ProteinID:
XP_015255407
Ensembl:
ENSCVAG00000018235
UniProt:
A0A3Q2G175
LinkDB
All DBs
Position
Unknown
AA seq
515 aa
AA seq
DB search
MAARGGFQSAPTAGGGGAMGPGPPVPGAAPGMGPGTPSGRMGPTSGAQNHMYRSPMPGPG
YPRPGMPPSSRMTPQGPAMGPPGYGGSPVSRPGMPGVMDPSRKRPAPQQIQQVQQQQNRN
QHTKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKR
KLRIFISNTFNPAKPDAEDGEGTVASWELRVEGRLLEDTAVSKYEATKQKRKFSSFFKSL
VIELDKDLYGPDNHLVEWHRTPTTQETDGFQVKRPGDVGVRCTVLLMLDYQPPQFKLDPR
LARMLGIHTQTRPVIIQALWQYVKTHKLQDPHEREFINCDKYLQQIFETQRMKFSEIPQR
LHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIAGL
DNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDFKTMTDVVGNPEEERRAE
FYYQPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggcggccagaggggggtttcagtcagcaccgactgctggtggtggtggagcaatggga
cctgggccaccggtaccgggtgcagcgccaggtatgggacccgggactccctctggaaga
atgggaccgacgtcaggcgcacagaaccacatgtaccgctctccgatgcccgggcctggg
tacccgagaccaggcatgcctccatccagtcgtatgaccccgcagggccccgccatgggc
ccaccggggtacggcggcagccccgtgtctcgccctgggatgcccggcgtcatggacccg
tctcgaaagagaccggcccctcagcagattcagcaggttcagcaacagcagaaccgtaac
cagcacacaaagaagaagaagatggctgataaaattctacctcaaaggatacgagaactg
gtcccagagtctcaagcttacatggatcttctggcttttgagaggaagctggatcagacc
atcatgcgcaaaaggctcgacatccaggaggcccttaaaaggcccataaagcaaaagaga
aagctccggatttttatatccaacaccttcaaccctgcaaagccggatgctgaggacgga
gagggcacagttgcatcatgggagctacgtgttgaagggcggctattggaagatactgct
gtgtccaaatatgaagctaccaagcagaaaagaaagttctcctcctttttcaaatctctt
gtgattgaattggacaaagatctgtatggaccagacaaccacctcgttgaatggcacagg
actccaaccacccaggagacggatggtttccaggtgaagaggcctggcgatgtgggagtt
cgatgcaccgtcctgctcatgcttgactaccagccccctcagttcaagctggaccctcga
ctggcccgcatgttgggcatccacactcagaccagacctgtcatcattcaggccttgtgg
cagtacgtcaaaacacacaaacttcaagatccacatgagcgcgagttcattaactgcgac
aaatacctccagcaaatttttgaaactcagaggatgaagttttctgaaatcccacagcgc
ttgcatgctctgctgatgcctccagaaccaatcatcatcaaccatgtgatcagcgtggat
cccaacgatcagaagaagactgcttgctacgacattgatgtggaggtggatgacacgctg
aagacccagatgaactcattcctgctctccacagccagtcagcaggaaattgcaggattg
gataacaagatccatgaaactattgagaccatcaaccagctgaaaacccagagggagttc
atgttgagttttgccagggatcctcagggcttcatcaacgactggcttcagtcccagtgc
agagacttcaagaccatgactgatgttgtgggaaacccagaagaagagcggagagcagag
ttctactatcagccgtgggctcaggaggcagtgtgtcgctacttctactccaaggtccag
cagcggcgacaggagctggagcaggcgcttggaatcaggaacacttga
DBGET
integrated database retrieval system
