KEGG   Cyprinodon variegatus (sheepshead minnow): 107101177
Entry
107101177         CDS       T06110                                 
Symbol
zc3h11a
Name
(RefSeq) zinc finger CCCH domain-containing protein 11A
  KO
K22415  zinc finger CCCH domain-containing protein 11
Organism
cvg  Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:cvg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cvg03019]
    107101177 (zc3h11a)
Messenger RNA biogenesis [BR:cvg03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     107101177 (zc3h11a)
SSDB
Motif
Pfam: zf-CCCH_3 zf-CCCH_2 zf_CCCH_4
Other DBs
NCBI-GeneID: 107101177
NCBI-ProteinID: XP_015255464
Ensembl: ENSCVAG00000017057
LinkDB
Position
Unknown
AA seq 859 aa
MICLCRYQGESIRSRGGPAAGSPPRVTMTNHGDDCYFFYYSTCTKGDSCPFRHCEAAMGN
ETVCNLWQEGRCFRTVCKFRHMEITKNRKEIPCYWEKQPAGCQKPHCAFFHERPRFVEGI
FVPPDKIQSKSEEQPEEEPAPPSSAPPLPPANTANPQLRGVIKTESQEPVPSPTHPPVVI
NPVDDDEDEEDQFSEEGEDGKVGASPRKFSKSGDSLNFGVSTLEEIRLRKALKSSMRRAG
SPIHRPQTTNGEKENIQALYRPAHSEIRGPVIFEEQQRPRGRVMERLGRRISSADFKSME
GPPLKKSLAERLGRTVDEEPPPVGTQKALKPVKERLGLVPPVRGARSAEATAASAKAPEL
IRIKTLEEIRQDKAAKSSGQNDAPSAAAAELPNTDLVKGIKRSVTVRGAQVSHVKTFSEI
VRAKKRKQEEQQNQNPDSKEEQSVEKPAGKSPEGAPDVEKVRVKTLEEIRREKAARVQAQ
QAEAKQSADAERSAPKRRQLLRMKKPPSQPSGGTPETTPDTSETPRKTAAAPAETIKVKT
FEEIMQEKRLRKQEMEVQGKSAAEADSSENPPAGGTLKRKLPAKICLTSAESSSPSAASP
PSRPVRKLLSLKPRAPSPMATPPSAGPSAGDRSPPQQPVSQSPSTDAVDRTQTCPAPHPA
TQLGGKSAQAADDRAVENLADGSKTRAVCSKVRPKLNVRPSVVKPAGRPAPAGQRKRGAD
ASAVAAVKPMNSSAAHQSSNKEAELPPAVPPTAPHQGEELQPAPVSAQLHGRNPTAAASG
AADPDTHPGPQSPGLKSPTQSKPRRPSMAASRTTSSTDASVDDFETLINQFTDDHLEEDV
DPAIGEDDLLQELSEMIDS
NT seq 2580 nt   +upstreamnt  +downstreamnt
atgatttgtctgtgtcggtatcagggagagtccattcgttccagagggggaccagctgct
gggtcaccgccgcgtgttactatgaccaaccatggagatgactgctacttcttctactac
tccacctgcaccaaaggagacagctgcccgtttcgacactgcgaggccgccatgggcaac
gagaccgtctgcaacctctggcaggaaggacgctgtttccggaccgtctgcaagtttcgc
cacatggagatcacgaaaaaccgaaaggagattccttgttactgggagaagcagccggcg
ggctgccagaagccgcactgcgccttctttcatgagcgacctcgctttgtagagggcatc
ttcgtccctccagataaaattcagagtaaaagcgaggagcagccggaagaggagccggcg
cctccttcatctgctcctcctcttccccccgccaacacagccaatcctcagctccgagga
gtcatcaagacagaaagccaggagccggtaccgagtccgactcatccaccggtggtcatt
aatccagtggatgatgacgaagacgaggaggatcagttctcagaggaaggagaggacggg
aaagtcggagcttctccgaggaagttctccaaatcaggagactcgctgaacttcggcgtg
agcaccctggaggagatacgtctgaggaaggccctgaagtccagcatgaggagggcaggt
tctcccatccacaggccgcaaaccaccaacggagagaaggagaacatccaggcgctgtac
cggccggcccactcagagatcagaggcccagtcatctttgaagaacagcagaggccgaga
ggcagagtgatggagaggctcggacgaaggatttccagcgctgattttaaaagcatggag
ggaccccccctgaagaagagtctggctgagcgtctgggcagaaccgtagatgaagagccg
ccaccggttggcacccagaaagccttaaagcctgttaaagaacgactgggcttggttcct
cctgttcgaggcgctcgctcagctgaagctacagcggcgtccgctaaagctcctgaactc
atccgcatcaaaactctggaggagatcagacaagataaggcggccaaatcttcgggccag
aatgatgctccttcagccgctgcagctgagcttcctaataccgacctagtgaaggggatc
aaacgctccgtcaccgtacgaggcgcccaagtcagccacgtgaaaacgttctctgagatc
gtccgagcaaagaaaagaaaacaggaagagcaacagaatcagaaccccgactcgaaggag
gagcagtcggtggagaaacctgcaggcaagagtcctgaaggagctccagatgtggagaag
gttcgggtaaaaaccctcgaggagatccgcagggagaaggccgccagagtccaggctcag
caggccgaagccaagcagagcgccgacgcggagcgcagcgctcccaagaggcgccagctg
ctgcgaatgaagaaaccgccgagccaaccgagcggcgggactcctgagacgactccggac
acgtcggagacgccacggaaaaccgccgcagctccagccgagaccatcaaggtgaagacc
tttgaggagatcatgcaggagaagcggcttcggaaacaggaaatggaagttcaggggaaa
agcgcggcagaagccgattcatctgagaacccgcctgcaggcggcacgcttaagaggaag
cttcccgctaagatctgtctaacatcagccgagtcttcctcaccgtccgctgcttcacct
cccagccgtcctgttcggaaactcctctccctcaaaccgcgagcgccttcacccatggcg
acgccgccttctgccgggccatcagccggggaccgcagtcctcctcagcagcccgtgtct
cagagcccatccacggacgccgtggacagaacccagacctgcccagcgccgcacccggca
acccagctgggtggaaaatccgctcaggctgcagacgatcgggcagtggagaacttggcg
gacggcagcaagaccagagcggtctgctctaaagtgaggcctaagctgaacgtaaggccg
tcggtagtgaagcctgcagggcggccggcgcctgcagggcagaggaagagaggagcggat
gcttctgccgtggcggctgttaaacccatgaacagcagcgctgctcatcagtcttccaac
aaagaggctgagctgccgcctgctgtgccccccactgccccccaccagggagaggagctt
cagcccgcccccgtctctgctcagcttcacggcagaaaccccacagcagccgccagcgga
gcggccgacccagacacccatccaggcccgcagagtccgggtctgaaaagtcccactcag
tccaaaccgcggaggcccagcatggcggcgtcccgcaccacctccagcaccgacgcctcc
gtggacgacttcgagaccctgatcaaccagttcaccgacgaccacctggaggaagacgtg
gacccggccatcggggaggacgacctgctgcaggagctgtcagagatgatcgacagctga

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