Cyprinodon variegatus (sheepshead minnow): 107101191
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Entry
107101191 CDS
T06110
Symbol
arhgef18
Name
(RefSeq) rho guanine nucleotide exchange factor 18
KO
K21066
A-kinase anchor protein 18
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
107101191 (arhgef18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvg04131
]
107101191 (arhgef18)
Membrane trafficking [BR:
cvg04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
107101191 (arhgef18)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_16
RhoGEF
PH
C1_1
PH_13
SOS1_NGEF_PH
C1_2
PHDvar_NSD
PROSCOOP16
Motif
Other DBs
NCBI-GeneID:
107101191
NCBI-ProteinID:
XP_015255482
LinkDB
All DBs
Position
Unknown
AA seq
1661 aa
AA seq
DB search
MADSPLNHSWPSFSKLWMKRWSFKRASECKPCSESCGNPSTQLSAQTPSGIGSSSSLPPA
SITEDVFTDNTSDDQDASSVVSDYDCPCVEAGSSLEDLQGLSSSLRDSEYFKDLQGESAA
VASSDASILPENNAQQTVDSQFSVNINSQTNEQLANTPLATNFLQVNATSFPSYQQLADE
PSFQSGVSRLSPKQSFTVDSNDFPDSALGLNWTLKLNGLLGSMDTVDAVTELDTIKDTGK
MELDGEPDMDSFPILVRSMSTSRRHSWGVPLSPLSSARRLSLDTAAIDSDEERDDDEEQQ
RSLFQSCQQQSDSFSAGPGDEPDGFSLRAMGRPSRQLYSRSEILATDDYSRAAHISRVIQ
TSKQAARAAGVAEEFDPEENLHSTEGQSHIAKHRNNGNPDAKDSGSVTWYEFLSKENEEE
EDRAEKVEKGTKVKRTLSSLRSRVTGSFNKDKGKHREKEQQRERVKERDREAKEKVCRTG
SHSNSNGHYLIPGSFSSSATCSLCSKSLQKKHGLQCMNCAVNVHKSCKSLLGECTSSKNK
RDPHLRGGGSASPNLALKDKERDQAGTAASQAADGQRGFPGTPGMTVSFFAPSSQPSASL
SSSSAAAPASSVGSSLRHHSSSGSLPGDMDEADALRSKRCNDDAISLAPSITESIIVEDS
HYAAVRADLESDAQDLEADSWSTAVDQQYLKKHTKDVVKRQDVIYELMQTEMHHVRTLKI
MLRVYVREMKENLQMDSGRLDCLFPRLENLLDLHTHFLSCLRERRRENLVSPSDRNYTIN
RVADILITQFSGEIGERMKDCYGHFCSHHTEAVSFYKELLQNNRRFQNLIRKISNLSIVR
RLGVTECILLVTQRITKYPVLVERILHNTEEGTEEHEDLTRAVSLIKDTIKEVDTLVNLH
EKDSRLREIHNKMEPKAQGKIKDGRVFRREDLAQGRRRLLHEGTVSWKAASGRLKDILAV
LLSDVLLLLQEKDQRYVFSTVDNKPSVISLQKLIVREVAHEEKAMFLICASSSEPEMYEI
HTTSKEERNTWMTHIRQAVESCPHSEERLVSEEEEARASRLREFQERLSQRDAVITQALT
EKLQLFTEMAESVAGLEDTASRSRLLLRGDSSDLQQGETLLKGAITEVENLQNLLQSGVR
EEAQSTRAEEGSGSGVLPRRAGTFGGYDSSPAILSKNGSVKKSFSGESRNRDRSQRASSD
PQLKDLCGSHTLEQTVDQSCSSPPKWNRIWSNSFPEAEFFDRVLMLSQRLYSLQAIVSQQ
DSQIELQRASLTERVSLPGRHRGNVLLEQEKQRTLALQREELANLNKLQSQHRQEQQRWE
KERERHRQQVEVTEARLRQREEECRKLEEQLAKEKEELDRQRETYQKDLERLRESTRAVE
KERERLENVKKMKRKTIEVAPMSGSLNGELLSSSGLAGSTCISELPHSQKPIVRASLSVA
QADYPERPEVAVRRETGSSTLPLPLKTEVPLHLFSTTNQQHKPVGVQQQIPTKLAAINSG
KGKGSKSGKASHRTDSSTSVDMKQMLPLKLSAREDNVLKAKRSISPHQQPVQSHSMHHHS
DQLSPPDQAGLDSQPTSSISSSFPPNVQKPPVAGVQPYAPSSAHLLHSQSADPILSPPHL
QPRSLSPSAPLPLNLHGTGHSATPPYTIPAEELNKEDVIFF
NT seq
4986 nt
NT seq
+upstream
nt +downstream
nt
atggctgactctccccttaaccactcctggccttccttctctaagctctggatgaagaga
tggtccttcaagagagcatccgaatgcaagccatgtagcgagtcctgtgggaatcctagc
acccagcttagtgcccagactcccagtgggatcggctcttcgtcttcattacctccagcc
tccatcacagaggatgtattcactgataacaccagcgatgaccaggatgcatcttcagta
gtcagtgactacgactgtccctgtgtggaagctggcagcagcctagaggacctacagggc
ctcagttcctcccttagagactcggaatatttcaaagacctgcagggagaatcagcggct
gttgcatcatcagatgcctctatattacctgagaacaacgcgcagcaaactgttgactca
caattctccgtaaacataaattcccagaccaatgagcaactagcaaacacacccctggcc
acaaacttcctacaggtcaatgcaacatcatttccttcttatcaacaacttgcagatgaa
ccttcctttcaaagcggtgtttcccggctctctccaaagcagagttttactgtcgacagc
aacgacttcccggattctgcacttggcctgaattggacacttaaactaaatggacttcta
ggatccatggacacagtggatgcagtcacagagctggacacgataaaggacacaggcaaa
atggagctggatggagagccagacatggacagctttcccattttggtcagatccatgtca
acgtctcggaggcacagctggggggtccctctgtcacccctcagttctgctaggagactg
agtctagacaccgcagctatagacagcgatgaagagcgcgacgatgatgaagagcaacag
aggagtcttttccagtcctgccagcagcagtctgacagcttctcagcagggcctggagat
gagccagatggtttcagtctgagggccatgggtagacctagcaggcagctgtactctcga
tcggagatcctcgccactgatgactattcccgagctgcacacatctctcgtgtcatccag
acatccaaacaggccgccagggcagcaggagtggcagaggagtttgacccagaggaaaat
ctgcactctacagagggacaaagccacatagcaaagcacagaaacaacggcaatccagat
gccaaagattcaggaagtgtcacctggtacgagttcctctccaaggagaatgaggaagag
gaggaccgagcagaaaaggttgagaaaggaacaaaggtgaaaaggactctaagctccctg
aggagcagggtgacgggttccttcaataaagataagggtaagcatcgagaaaaagagcag
cagagagagagggtgaaggagagagacagggaggccaaagagaaagtgtgcaggaccggc
agccacagcaacagcaacgggcattatttaataccaggctccttctccagttccgccacc
tgctcgctgtgcagcaagagcctgcagaaaaagcatggtctgcagtgcatgaattgtgct
gtgaacgttcacaagagctgcaaatctttgcttggcgagtgcaccagcagcaagaacaag
agagatcctcacttgaggggcggtggttcagcatctcctaaccttgcactgaaagacaag
gagagggatcaggcaggcacagccgcatctcaggctgcagatggccagcgagggtttccc
ggcaccccaggcatgaccgttagtttttttgcacccagcagtcaaccttcagccagcctc
agcagtagcagcgctgcagctccagcctccagcgttggttccagcctccgtcaccacagc
agctcaggatcccttcccggggacatggatgaggcagatgctctccgctctaaacgctgc
aatgacgacgccatttccctcgctccctccatcacagagtccatcatcgtagaagattct
cactatgcagcagtgcgggctgacctggagtccgatgctcaggacttggaggcagactcc
tggagtacagcagtcgatcagcagtatctgaagaaacatacaaaggacgtggtgaaaagg
caggatgttatatacgagctaatgcagaccgagatgcaccatgtgaggacgctaaagata
atgctgcgcgtctatgtccgagagatgaaggaaaacctccagatggactctggcagactg
gactgtctgttcccccgcttggaaaacctcctggaccttcacacgcatttcctgtcatgt
ctcagagagcggcggagggaaaaccttgtctcacccagcgacaggaactacactatcaac
agagtggcagacatcttaatcactcagttctcaggtgaaataggagagaggatgaaggac
tgttatggacatttctgtagccaccacactgaagctgtcagcttttacaaggagctgctg
caaaacaatagaaggtttcagaacctcataaggaaaatcagcaacttatccatcgtacgg
aggttaggagtgactgaatgtattttgctggtaacacagaggattaccaagtatccagta
ctagtggagcgcatcctccacaacacggaagagggtacagaggagcatgaagatctgact
cgagcggtgagtctgattaaagacaccatcaaagaggtggacacactggttaatctccat
gagaaggattcccgtctcagagaaatacacaacaagatggagccaaaggcacagggaaag
atcaaagatggcagagtgtttcgcagggaggacctcgctcagggcaggaggcggctgctc
cacgagggcacagtgagctggaaggctgcctctggcagactcaaagatattctggctgtc
ctgctgtcagatgtgttgctcctacttcaagagaaggatcagagatatgtattttccaca
gttgacaacaagccatcagtgatttctctccaaaagctaatagttagagaggtggcccat
gaggagaaggccatgtttctcatctgtgcttcctcaagcgagccagagatgtacgagatc
cacaccacttctaaagaggagcgaaacacttggatgacgcacatacggcaagctgtagaa
agttgtcctcattctgaggagaggctggtcagtgaggaagaggaggctcgtgcttctaga
cttagagagtttcaagagcgtctgagccagcgagatgcagtgatcacccaggctctcaca
gagaagctgcagctgttcacagagatggcggagtctgtggcaggtctagaggacacggct
tctcgttctagactgctgctacgaggagactcctcagacctccagcagggagagactcta
ctcaaaggagccatcactgaagttgaaaacctgcagaacttgttgcagtctggagtgagg
gaggaggctcagtccactcgggcagaggagggaagcggttctggggttctgcccaggaga
gcaggaacctttggaggctatgacagcagcccggccatcctcagtaagaacggcagcgta
aagaagagcttctctggtgagtctagaaatcgagacaggagccagagagccagctcagac
cctcagctcaaagacctctgtggaagccacaccctggagcagacggttgatcagagttgc
tcctctcctccaaaatggaaccgcatctggtccaactccttccctgaagctgagttcttt
gacagagtgctgatgctctcccagagactttacagcttgcaggccatcgtatcccagcag
gacagccagatagagctgcagagggcctcacttacagagcgggtgtcgttacctggacgc
cacagaggaaacgtgctcctagaacaggagaaacagcgaactttagctctgcagagagag
gagctggccaacctgaacaagcttcagtctcagcacaggcaggagcagcagcgctgggag
aaggaaagggagaggcaccgccagcaagtggaggtgaccgaggcccggctacggcaaaga
gaggaggagtgcaggaaacttgaggagcaactggctaaggagaaggaggaactggaccgg
cagagagagacttatcagaaggacctggagagactgcgggagtccaccagagctgtggag
aaagaaagggagcgactggaaaacgtgaaaaagatgaaaaggaaaacaatcgaggttgct
cctatgtctggtagtctgaacggggagctcctctcatcctctggtctcgccggctccacc
tgtatctccgagttgccgcactcccagaagcccatagtgcgggccagtctctctgtggct
caggctgactaccccgagcgtccagaagtcgcagtgagacgggagactggctcctctacg
cttcctctacccttgaaaactgaggtgccgctccacctcttcagcaccaccaaccagcag
cacaaaccggtcggggtgcagcagcagatccccaccaaactggcagcaatcaacagcggt
aaagggaaaggaagcaaaagtgggaaggcgtcgcatcgcacagacagctccacctcggtg
gacatgaagcagatgctccccctgaaactgtctgcaagagaggacaatgtgctgaaggcc
aaacgctccatcagcccccatcagcagccagttcagtcccactccatgcatcaccactca
gatcagctcagtcctccagaccaggctgggttagacagccagcccacctcctccatcagc
tcctccttcccacctaatgtgcagaagccgccggtggctggtgtgcagccctatgcaccc
tcctctgcacaccttctccactctcagagtgctgaccctatcctgtcgcccccccacctg
cagccacgcagcctcagcccaagcgcgccgctcccactgaacctccatggaactggtcac
agcgcaacgccaccctacaccatccctgcagaagagctaaacaaggaggatgtcatattt
ttctaa
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integrated database retrieval system
