Cyprinodon variegatus (sheepshead minnow): 107101255
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Entry
107101255 CDS
T06110
Symbol
gapvd1
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvg04131
]
107101255 (gapvd1)
Membrane trafficking [BR:
cvg04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
107101255 (gapvd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RasGAP
VPS9
DUF5601
DUF5740
Motif
Other DBs
NCBI-GeneID:
107101255
NCBI-ProteinID:
XP_015255584
Ensembl:
ENSCVAG00000013895
LinkDB
All DBs
Position
Unknown
AA seq
1474 aa
AA seq
DB search
MVKPDIHTLAHHLKQERLYVASEKHLIQRLNSDVLKTAERLYRAAWIAKQQRINLDRLIL
TSVEASPAECCQHAKMLEDTQFIDGYKTLGFQETIYGEFLARFRENPRLVASCLVAGEKL
NQEHTQGVIYNVFTSLYGNCIMQEDESYLLQVLRYLVEFELKESDNPRRLLRRGTCAFSI
LFKLFSEGLYSAKLFLTATLHEAIMQLLVEDEDHLETDPAKVTERLTPAQQERFGEKGSE
EYKQRVQAAVEANEAKLVALVNKFIGYLKQNTYCFPHSLRWIVSQMYKTLSCVERLEVGE
VRTMCTDLLLTCFICPAIVNPEQYGIISDAPINEVARFNLMQVGQLLQQLAMADDDSDPR
RKSSLSKFDKSCVAAFLDVVIGGRAVETPPMSSMNPLEGLSRTAVYITHSQLLALVDFVR
SVMAGDHLREEEHMALETLLANVPHSRPVKSNSLELTPSNTPQLSPATTPANKKNRLPIG
QHLAAITSWDPSSTTLSAHIPLVTPFAARSRSRTNIAQEGEAEASSQESLQELMPEEVLV
ISLGTGPQTVPGMMSENEVLNLQMADGPQGDGLADDTKLHGKPDKTLRFSLCSDNLEGIS
EGPSNRSNSVSSLDLEGESVSESGAGPSGSNGVEALQLLEHEQATTQDNLDDKLRKFELR
DMMGLTDDRDISETVSETWSTDVLGSDFDPNTDEDRLQEIAGAAAENMLGSLLCLPGSSS
VLLDPYGSTISETTSEAWSVEVLPSDSEAQDLKQEERLQELESCSGVGSTSDDTEVREVS
SRPSTPGLSVVSGISATSEDIPNKIEDLRSECSSDFGGKDSVTSPDGEESGHGAHQLTSP
PSQADSLLAMFDPLSSGEGSSTGTIVRPKVHYARPTHPPPDPPIPEASAMGPDVRHSICT
AQYLAQSELEQSKQRHSFPDRLVRSRSSDIVCPGRRPTSDPGLNRRVAVEERDPPGAFAS
GPSSSPSKDSLKGEVEDRKDSDDEKSDRNRPWWKKRFVSAIPKAPITAFRKKDKHEKEDP
PQDRVPQDDPVPRQNSQAQAAEDILDKYRNIKRTSPSDGATGGASYDGSGGLCDEDNVNE
PPREDALQNISADDLPDSASQTAQQHDSKFSFSDAKKKLRLALCSADSVALPIMAPTSTR
NGLPDHMDPEDNEIVCFLKIQLAEAINLQDKNQMAQIQETTRCVSRFDARTCRKLLAAIA
EDYRKRAPYIAYLTRCRQGLQTSQAHLERLLQRVLRDKEVANRYFTTVCVRLLLEHMETK
MLEFIKAFQGCTAADDKTAAVEDFLRYLYGAMARDAIWQFASEDQLQDAQMAIERSVMNR
IFKLAFYPNQDGDILRDQLFHEHIQRLSKVVTANHRALQIPEVYLKEAPWPSAQAEIRTI
NAYKTPRDKVQCILRMCSTIMNLLSLANEDSVPGADDFVPVLVFVLIRANPPCLLSTVQY
INNFYASRLSGEECYWWMQFTAAVEFIKTIDDRK
NT seq
4425 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagccagacatccacactctggcccaccacctgaagcaggagcggctatatgtg
gcgtcggagaaacatctgatccagaggctcaacagcgatgtactgaagactgctgagagg
ctctaccgtgccgcatggattgccaagcagcagaggatcaacctcgatcggctcatcctc
accagtgtggaggcctccccggctgagtgctgccaacatgccaaaatgctggaagataca
cagttcatcgatggatacaagactctgggtttccaggaaacgatctacggcgagttcttg
gccagatttcgggaaaatcccagacttgttgcttcctgcctggtggcaggagaaaaactt
aaccaggaacacacccagggcgtcatctataacgtcttcacctcactttacggcaactgt
atcatgcaggaggacgagagctacctgctgcaggtgttaagatatttggtagaatttgag
ctgaaggagagcgacaaccctcgccgtcttctccgacgtggaacctgtgccttcagcatc
cttttcaaactcttctccgagggcctgtactcggccaagctcttcctcacggctaccctt
catgaagccataatgcagctgttggtggaggatgaagatcacttggaaaccgacccggct
aaggtgacggagcgcctcactccagctcagcaggaacgcttcggggagaaaggctccgag
gaatacaagcaaagagttcaggcagctgtggaggctaacgaagccaagctggtagctctg
gtcaacaagttcatcggttaccttaagcagaacacctactgctttcctcacagcctacgc
tggatcgtgtcccaaatgtacaaaactctgtcgtgtgtggagcgtcttgaagtgggcgag
gtgcgcaccatgtgcaccgacctcctgctgacctgtttcatttgcccggctatcgttaac
ccagagcagtatggcatcatctccgatgcacccatcaatgaagtggctcgtttcaacctg
atgcaggtggggcagcttctacagcagctggccatggccgatgacgattcagaccccaga
cggaagagcagtttgtcaaagtttgataagagttgtgttgctgcttttctggatgtggtg
attggaggacgagccgttgagacgccacccatgtcctccatgaaccctctcgaaggtctc
agcagaacggcggtctacattactcatagtcagctgcttgcactggtggactttgttcgg
agcgtgatggcaggagaccatcttcgagaggaggagcacatggccctggagaccctgcta
gctaacgttccacactcccgacccgtgaagagcaacagtttggagctgaccccctccaac
acccctcagctttccccagctacaacccctgccaataagaagaacagattacccatagga
caacatttagctgctataacatcctgggacccctcatccaccactctctctgctcacatt
ccattagtaaccccttttgctgctcgcagccgtagccgtaccaacatcgcccaggagggg
gaggcagaggccagctcccaggagtccctgcaagagctgatgccagaggaggtgctagta
atttcactcggaactggtcctcaaactgtccctgggatgatgtcagagaatgaggttttg
aacttgcagatggctgatgggccccagggggacggccttgctgatgataccaagctgcac
ggcaaaccagacaaaacccttcgcttctcactgtgcagcgacaacttggagggaatctca
gagggaccgtccaatcgctccaactcagtttcctctctggacctggagggagagtctgtc
tctgagtcgggagctggaccatcagggagcaacggggtagaagcactgcagctgttggag
cacgaacaggctaccactcaggacaacctggatgacaaactgcgcaagtttgagctcaga
gatatgatgggtctgacggatgaccgggacatctctgagacggtcagtgagacctggagc
accgacgtccttggaagcgactttgacccaaatacggatgaagatcgactgcaggaaata
gcaggggcagcagcggagaacatgctcggcagcctgctgtgccttcctggctccagttca
gttctcttggacccctacggctccaccatctcagagaccacaagcgaagcctggagtgtg
gaggtccttcccagtgactcagaagctcaagacctgaagcaggaggaacgcctgcaggag
ctggagagctgctctggggtcggcagcacctcagatgacacagaggtcagagaagtcagc
tcgagacccagtacaccaggcctcagtgttgtctcaggtatcagtgcgacctcagaagac
atcccaaacaagatcgaggacctgcggtccgagtgcagctcagatttcggcgggaaggac
tccgtgaccagtcctgatggcgaggagtcgggtcatggagcccaccagctgacatctcca
ccttcacaggccgattcgttgctcgccatgttcgatccgctctcctccggtgaaggttct
tccacagggacaatagtcaggcccaaggtgcactacgccaggcccactcaccctccccca
gatcctcccatccctgaagccagtgccatggggccggatgtgcggcactccatttgcacg
gcccaatacttggcccagtctgagctggagcagtcaaagcagcgccattccttccctgac
agactggtccgcagtcgcagttctgacatcgtgtgcccgggtcgacggcccacgagcgac
cccggcctcaacaggcgggtagcggtcgaagagcgtgaccctcccggggctttcgcctca
ggaccatcgtcatcgccaagcaaagactccctgaaaggagaggtggaggacagaaaagac
agcgacgatgaaaaatctgatcgcaacagaccgtggtggaagaaacgtttcgtctcagcc
attcccaaagctcccatcacagcgttcaggaagaaggacaaacatgagaaggaggatccg
cctcaggatcgtgttccacaagatgacccagtgccaagacagaactctcaagcccaggca
gccgaggacattctggacaagtacaggaacatcaagaggaccagtccgagtgacggagcc
acaggaggagcctcttatgacggttcaggaggtctgtgcgatgaagacaatgtgaatgag
cctcccagagaggatgctctgcagaatatttctgcagatgatctaccagactcagccagc
cagacggcgcagcagcacgattccaaattttcttttagtgatgcaaagaagaagctaagg
ttggctttgtgctctgctgactctgtggctctccctattatggcaccaacaagcacacgt
aatggactccctgatcacatggaccctgaagacaatgaaatcgtctgcttcctgaagatc
cagctggcggaggccatcaaccttcaggataagaaccagatggcccagattcaggagacc
actcgctgcgtcagccgttttgatgcacgcacctgcaggaagctgcttgccgccatcgca
gaggattacagaaagcgggctccgtacatagcttatctaaccaggtgtcgccagggtctg
cagacatcccaggcccacctggagaggctcctgcagagggtcctgagagacaaggaggtg
gcaaaccgctacttcaccacagtctgcgttcgcctccttcttgaacatatggagacaaag
atgctggagttcattaaagctttccaggggtgcacagcagctgatgacaagactgcagca
gtggaggatttcctgcgctacttgtacggtgccatggcccgtgatgccatttggcagttt
gcaagcgaggaccagctgcaggacgcccagatggccatcgagcgcagcgttatgaaccgc
atcttcaaactggccttctaccccaatcaggatggagatattctcagagaccagctgttc
catgaacacatccagcggctttcaaaggttgtgacagcaaatcatagagctctgcaaatc
ccagaggtttaccttaaagaggctccctggccttcagcacaggctgagatcaggaccatc
aacgcatacaagacgccacgagacaaagtccagtgcatcctgcgcatgtgttccaccatc
atgaatctgctgagtctcgccaacgaagactctgtgccaggagcggacgacttcgtccca
gtcctcgtcttcgtcctcataagagcaaacccgccctgcctgctgtccaccgttcagtac
atcaataatttctacgccagccggctgagtggggaggagtgctattggtggatgcagttc
accgctgcggtggaattcattaagaccatcgacgatcgcaagtga
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integrated database retrieval system
